Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000494-TA|BGIBMGA000494-PA|undefined
(1054 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0140 + 17638335-17638583,17638843-17639061,17639206-176394... 35 0.39
12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351... 34 0.52
03_01_0372 + 2895807-2895883,2896557-2896647,2896741-2896839,289... 33 1.6
12_01_0789 - 7200452-7201240 32 2.1
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 32 2.1
05_03_0194 + 9547626-9547715,9549235-9549311,9549493-9549564,954... 32 2.1
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 32 2.1
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 31 4.9
01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819 31 6.4
10_08_0875 + 21212413-21212758,21215931-21217357 30 8.5
>03_04_0140 +
17638335-17638583,17638843-17639061,17639206-17639443,
17640614-17640809,17640888-17640942,17641495-17641645,
17642501-17642809,17642950-17643215,17643311-17644237,
17644386-17644712
Length = 978
Score = 34.7 bits (76), Expect = 0.39
Identities = 28/145 (19%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Query: 707 EVNEEALRNIVNSSNQNQLSGNEVVNNLMEQIQKGDIEMTSTPSTARSLVEEFDQYYKSF 766
E+ +L N + +++++LS E +L+++ QK ++T +S++ + +
Sbjct: 506 EMERLSLTNDTDKASRDRLSRIEAELSLLKEKQK---DLTEQWEREKSVMTKIQSIKEEI 562
Query: 767 VEEEIQLNRPEREYKPPVVCEIEDKYVQVSLPKLAPIEPR--SYQSASTMTCDSSDDNDD 824
+++ + EREY E++ + +L E YQS+ DD
Sbjct: 563 DRVNVEIQQAEREYDLNRAAELKYGSLNALQRQLQTTEKELDEYQSSGKSMLREEVTQDD 622
Query: 825 ILENLCTYDMVPINKPEYPELEETI 849
I E + + +P++K + + E+ +
Sbjct: 623 IAEIVSRWTGIPVSKLKQSDREKLL 647
>12_01_0445 -
3513733-3513819,3514392-3514613,3514730-3514999,
3515033-3517110,3517649-3517976,3519136-3519255,
3519299-3519352,3520115-3520154,3520344-3520411
Length = 1088
Score = 34.3 bits (75), Expect = 0.52
Identities = 27/108 (25%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 714 RNIVNSSNQNQLSGNEVVNNLMEQIQKGDIEMTSTPSTARSLVEEFDQYYKSFVEEEIQL 773
R + N++ L+ ++ ++ E++ D E+ ++ S A +LV EFDQ+ +E+ +
Sbjct: 393 RPLANNTCVESLTDSQ--SDSAERMAAVDNELRNSDSWASALVAEFDQFKNGNADEKNLV 450
Query: 774 NRPEREYKPPVVCEIEDKYVQVSLPKLAPIEPRSYQSASTMTCDSSDD 821
N PVV ++ D +++ + +LA + P S +++ST ++ D
Sbjct: 451 NN-------PVVIDLMDDFLE--MERLAAL-PESDRTSSTFDMETDSD 488
Score = 31.1 bits (67), Expect = 4.9
Identities = 42/194 (21%), Positives = 84/194 (43%), Gaps = 7/194 (3%)
Query: 442 ENLIKNPILYDSDFDIKATEYLELLPKFENGTSLENGQTMATKSLCLLNLLIRDEQRRAR 501
+NL+ NP++ D D E L LP+ + +S + +T + K++ N + E R
Sbjct: 447 KNLVNNPVVIDLMDDFLEMERLAALPESDRTSSTFDMETDSDKAV-TRNSSSKLETEELR 505
Query: 502 NLLYVLKMREDALKDFTKSQILWLENKKKHENTDVSTLKKKQRGALLKLQHECGEMHRMR 561
N + L + + ++ K + L + + + L + L+++Q E + +
Sbjct: 506 NQVADLHAQVEKIESEKKELEMALMEARNQLDISCNAL-VAAKNRLVEMQMELDLANDSK 564
Query: 562 KALLTLSEKRKDALIKTKKNIELKLKN-NVDVEHLIEKKKLKRNGSDRNIVPLKCFDLSS 620
L + + L KK +E +L++ +V VE L++ +D+ + + LS+
Sbjct: 565 HDAL----RDFEGLNSEKKALEFQLESKSVRVEELLQVVASLEENTDKKELESQLELLSA 620
Query: 621 SGCEETLTSRSTSE 634
E LT S E
Sbjct: 621 EAKELRLTVTSLLE 634
>03_01_0372 +
2895807-2895883,2896557-2896647,2896741-2896839,
2897220-2897268,2897269-2897405,2898027-2898248,
2898335-2898488,2898574-2898723,2898890-2898978,
2899632-2899844,2900180-2900314,2900461-2900640,
2901004-2901111,2901215-2901340,2901421-2901550,
2901637-2901729,2902067-2902192,2902294-2902304
Length = 729
Score = 32.7 bits (71), Expect = 1.6
Identities = 51/221 (23%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 372 SLHYSHASDTYKL-MKPSEIISSIKVNSLAQSDFMCEQFQREFNFIDSFFESLQYLENCS 430
S H+S S T + +I+++I++ + + ++ + E + + S E Q L+N
Sbjct: 341 SRHFSETSSTIMFGQRAMKIVNTIRIKEEVDYESLYKKVEHEVDHLTSEMERQQKLKN-- 398
Query: 431 LSNKCLSTNKVENLIKNPILYDSDFDIKATEYLELLPKFENGTSLENGQTMATKSLCLLN 490
S K ++E +K S D+K T +++ EN ++E Q +T +L+
Sbjct: 399 -SEKM----QLEKKLKESEA--SLNDLKVTSNMQI----EN-MAMEKRQLESTIKRLMLD 446
Query: 491 LLIRDEQRRARNLLYVLKMR-EDALKDFTKSQILWLENKKKHENTDVSTLKKKQRGALLK 549
L ++++ N+L + E +L + + Q+ + N +T S +KK R L +
Sbjct: 447 L---EKEKGKNNILSEQIIHLETSLDENKQKQLENISNTNILADTTKSH-EKKIRELLKQ 502
Query: 550 LQHECGEMHRMRKALLTLSEKRKDALIKTKKNIELKLKNNV 590
L+ E M L L ++ DA +KNI +L+ +
Sbjct: 503 LEDERSRSASMNDHLNVLQQQLSDAQNYFQKNIACELEKQL 543
>12_01_0789 - 7200452-7201240
Length = 262
Score = 32.3 bits (70), Expect = 2.1
Identities = 37/193 (19%), Positives = 80/193 (41%), Gaps = 7/193 (3%)
Query: 635 IAIRNTDIANVTSVSIKSAEKSIQTGDSILETLMTAPTDAAAENFVVVDGGYLNIIFHNL 694
+ + + D+ V + + + G+ +L + + DA E VV + + +
Sbjct: 37 VVVDSMDVMAGKEVHVVADSMDDEVGEEVLLLVADSMDDATGEEVHVVADSMDDEVSEEV 96
Query: 695 TLPQIFSNGKQYEVNEEALRNIVNSSNQNQLSGNEVVNNLMEQIQKGDIEMTSTPSTARS 754
L + ++ E EEAL + +S + VV + M+ ++ M + S
Sbjct: 97 LL--VVADSMDDEAGEEALLVVADSMDDAAGEEMHVVADSMDDAAGEEVVMVAD-SMDDI 153
Query: 755 LVEEFDQYYKSFVEEEIQLNRPEREYKPPVVCEIEDKYVQVSLPKLAPIEPRSYQSASTM 814
EE S +E ++ E+ K E ++ +++ + KL + PR + +
Sbjct: 154 AGEEVVVVADSMDDEAAEVVEVEQNKKVHSGHEFDE--IKIEMWKL--LLPRYFAKEECV 209
Query: 815 TCDSSDDNDDILE 827
T + D+ND+++E
Sbjct: 210 TTGAGDNNDEVIE 222
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 32.3 bits (70), Expect = 2.1
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 495 DEQRRARNLLYVLKMREDALKDFTKSQILWLENKKKHENTDVSTLKKKQRGALL--KLQH 552
+E+++ + K E+ LK + + ++K E LKKKQ G LL K +
Sbjct: 439 EERKKREEEERLRKEEEERLKKEEEERKAEEAKRRKKEREKEKLLKKKQEGKLLTGKQKE 498
Query: 553 ECGEMHRMRKALLTLSEKR--KDALIKTKKNIELKLKNNVDVEHLIEKKKL 601
E + MR+ L SE + A+ +TKK K + +E K+
Sbjct: 499 EAKRLEAMRRQFLEQSELQVADGAVPETKKRPIYDSKKKKGQQKTLETAKV 549
>05_03_0194 +
9547626-9547715,9549235-9549311,9549493-9549564,
9549648-9549719,9550047-9550118,9550199-9550225,
9550226-9550297,9550382-9550453,9550897-9550968,
9551047-9551121,9551226-9551297,9551384-9551449,
9551544-9551609,9551683-9551727,9551822-9551886,
9551971-9552350,9552419-9552545,9552688-9552846,
9552929-9553047,9553182-9553392,9553582-9553762,
9553845-9553995,9554086-9554448
Length = 901
Score = 32.3 bits (70), Expect = 2.1
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 424 QYLENCSLSNKCLST-NKVENLIKNPILYDSDFDIKATEYLELLPKFEN---GTSLENGQ 479
+Y+++C S ST +K++NL K D+DF K +YL ++PK E+ G +
Sbjct: 137 RYIDSCGFSGPFPSTFSKLQNL-KILRSSDNDFTGKIPDYLGIMPKLEDIRIGDIVNGSS 195
Query: 480 TMA--TKSLCLLNLLIRD 495
++A + L NL++R+
Sbjct: 196 SLAFISNLTSLSNLILRN 213
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 32.3 bits (70), Expect = 2.1
Identities = 31/153 (20%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 628 TSRSTSEIAIRNTDIANVTSVSIKSAEKSIQTGDSILETLMTAPTDAAAE-NFVVVDGGY 686
+S+ IA N ++ + T +++ ++++ L++ A TD+ +E + + V+
Sbjct: 472 SSKDRENIAALNKEL-DATKAMLENEVAAVKSLRESLQSTEEALTDSRSEVSKLSVELDE 530
Query: 687 LNIIFHNLTLPQIFSNGKQYEVNEEALRNIVNSSNQNQLSGNEVVNNLMEQIQKGDIEMT 746
N + +L L QI ++ +E L N + + ++ + ++ E + KG E+
Sbjct: 531 ANRMNQDLVL-QISKLQDEFNEMQEGLTNKLGEVESVSKALSDELVSVKEMVHKGQEELE 589
Query: 747 STPSTARSLVEEFDQYYKSFVEEEIQLNRPERE 779
+T + S+VE D K ++ +L +E
Sbjct: 590 ATSNELASIVEARDNLKKELLDVFKKLESTSQE 622
>03_05_0432 -
24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/57 (28%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 559 RMRKALLTLSEKRKDALIKTKKNIELKLKNNVDVEHLIEKKKLKRNGSDRNIVPLKC 615
R++K L +LSE+ KD +K++ + L+ N ++E + K+ L + +++ + L+C
Sbjct: 122 RLQKELESLSEENKD--LKSRISSLLEQTNKAELEVVCLKEALAQQNTEKEAIVLQC 176
>01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819
Length = 539
Score = 30.7 bits (66), Expect = 6.4
Identities = 32/156 (20%), Positives = 66/156 (42%), Gaps = 3/156 (1%)
Query: 605 GSDRNIVPLKCFDLSSSGCEETLTSRSTSEIAIRNTDIANVTSVSIKSAEKSIQTGDSIL 664
GSD ++V L FD + + + + +NT I + + S + + + G +
Sbjct: 385 GSDDSLVDLFLFDATPHSLGVAAAGGAMAVMIPKNTPIPVMARENTISIQPNHKKGHKQV 444
Query: 665 ETLMTAPTDAAAENFVVVDGGYLNI-IFHNLTLPQIFSNGKQYEVNEEALRNIVNSSNQN 723
TL +A + + G L++ + ++ + + + +VN +N + Q+
Sbjct: 445 RTLSSARSKLPGAHSKAKPGVKLSVSVCFSIDADGVLTVSARDKVNGH--KNQMRVMEQS 502
Query: 724 QLSGNEVVNNLMEQIQKGDIEMTSTPSTARSLVEEF 759
QLS E+ ME + + A++L+EEF
Sbjct: 503 QLSKEEIERMTMEAKEYMAADEEKERIKAKNLLEEF 538
>10_08_0875 + 21212413-21212758,21215931-21217357
Length = 590
Score = 30.3 bits (65), Expect = 8.5
Identities = 48/245 (19%), Positives = 95/245 (38%), Gaps = 14/245 (5%)
Query: 618 LSSSGCEETLTSRSTSEIAIRNTDIANVTSVSIKSAEKSIQTGDSI----LETLMTAPTD 673
L SG +A+ +T++ + TS+ I S E+ + ++ ++ T ++
Sbjct: 275 LQKSGDNHVACQSGQPPLAV-HTELQHDTSIVISSGEEKVLFDLNVPAESIDMESTITSN 333
Query: 674 AAAENFVVVDGGYLNIIFHNLTLPQIFSNGKQYEVNEEALRNIVNSSNQNQLSGNEVVNN 733
+ + V DG + H+ + E +I S + N E +NN
Sbjct: 334 SFRDKLVKNDGSEETVTDHSFSKRNGVHAETSIEERTVGEHHISVSKDGNTTFFQESINN 393
Query: 734 LMEQIQKGDIEMTSTPSTARSLVEEFDQYYKSFVEEEIQLNRPEREYKPPVVCEIEDKYV 793
+++ Q D+ S+ + L+ E + + V E++ + + DK V
Sbjct: 394 EIDKAQSSDLISVSS----KHLIAE-TPHVDNIVCPELRASPDGASSPQETLIGNCDKMV 448
Query: 794 QVSLPKLAPIEPRSYQSASTMTCDSS----DDNDDILENLCTYDMVPINKPEYPELEETI 849
++ L I S + DS D ND+ +L +Y+ + +N E + E+I
Sbjct: 449 CIAAETLVSIFSSSACTTDCPGTDSQTAAEDVNDEPQHSLDSYEEIVLNVEEIRDDGESI 508
Query: 850 PQTGP 854
P P
Sbjct: 509 PVIPP 513
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.129 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,666,808
Number of Sequences: 37544
Number of extensions: 1064351
Number of successful extensions: 2210
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2208
Number of HSP's gapped (non-prelim): 12
length of query: 1054
length of database: 14,793,348
effective HSP length: 90
effective length of query: 964
effective length of database: 11,414,388
effective search space: 11003470032
effective search space used: 11003470032
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 65 (30.3 bits)
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