GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000494-TA|BGIBMGA000494-PA|undefined
         (1054 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8...    28   1.5  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    27   2.6  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    27   3.4  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    27   3.4  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     26   6.0  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    26   6.0  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    25   7.9  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   7.9  

>AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8
            protein.
          Length = 700

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 980  SGVKPTVVSGRRSDHIDDILFAEW 1003
            +GV PTVV+ +  D + D+ FA W
Sbjct: 66   TGVPPTVVTIKDLDELPDLTFATW 89


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 29/142 (20%), Positives = 63/142 (44%), Gaps = 15/142 (10%)

Query: 389 EIISSIKVNSLAQSDFMCEQFQREFNFIDSFFESLQYLENCSLSNKCLSTNKVENLIKNP 448
           E++S + V    + D + ++ +R        F S   LE        ++ NK+ENL+ N 
Sbjct: 784 ELMSQLSVQDQHEVDSLNDEIRRLNQENKEAFTSRMSLE--------VTKNKLENLLTNN 835

Query: 449 ILYDSDFDIKATEYLELLPKFENGTSLENGQTMATKSLCLLNLLIRDEQRRARNLLYVLK 508
           +    D  ++A + + +  +    T+  N + +AT+    +  ++ D +   R L   LK
Sbjct: 836 LFRRKDELVQALQEISVEDRKRQLTNCRN-EVVATEK--RIKKVLTDTEEVDRKLSEALK 892

Query: 509 MREDALKDFTKSQILWLENKKK 530
            ++   K+       W++ +K+
Sbjct: 893 QQKTLQKELES----WIQKEKE 910


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 12/103 (11%)

Query: 508 KMREDALKDFTKSQILWLENKKKHENTDVSTLKKKQRG----ALLKLQHECGEMHRMRKA 563
           +++ED +   +K Q L +  K+K E  +V   KKK+ G     + K + E  E+      
Sbjct: 247 RLKEDQI---SKQQELNIIEKRKEEADEVLKEKKKEVGKMTREMAKKEQEIREVEAEMSK 303

Query: 564 LLTLSEKRKDALIKTKKNIELKLK-----NNVDVEHLIEKKKL 601
              +  K K+ +  T+K ++  LK        D  H  + KKL
Sbjct: 304 RHPMFIKAKEKVAHTQKKLDGALKTLEQARRADEAHQADIKKL 346


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 6/85 (7%)

Query: 687  LNIIFHNLTLPQIFSNGKQYEVNEE-ALRNIVNSSNQNQ--LSGNEVVNNLME-QIQKGD 742
            ++II H   LP ++ NGK  +++E+ A+    N    +Q  +    +  N +E   +  D
Sbjct: 1750 IDIIPHGHELPMVYINGKPQQIHEKYAVEMYTNDDGGDQPLIRVYALPGNELEISFRDDD 1809

Query: 743  IEMTSTPSTARSLVEEFDQYYKSFV 767
            I++      AR   ++   Y+ +FV
Sbjct: 1810 IKIVFDGYRARFFADQ--SYFNNFV 1832


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 256 SESLPNMKIPSMKTTSDQDDDSFVRKTGSYI 286
           S SLP   + S KT+S Q   S +  TG Y+
Sbjct: 14  SSSLPFASLGSGKTSSKQSSGSAIIDTGMYL 44


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 224 STDAQTELIKATFDSLEIPNVTLTKEHNKYQQSESLPNM 262
           ST  + EL+KAT   LE  N+ + KE N ++ +E +  M
Sbjct: 88  STTPELELLKATIQQLEEQNLEM-KEQN-FRLAEQITRM 124


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 9/30 (30%), Positives = 21/30 (70%)

Query: 699 IFSNGKQYEVNEEALRNIVNSSNQNQLSGN 728
           +F  GK+ + NE+   + +N+++ +QL+G+
Sbjct: 745 VFYGGKREDENEDTKADNMNNNHSDQLTGD 774


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 686 YLNIIFHNLTLPQIFSNGKQYE 707
           YL I+  NL +PQ+F+   QYE
Sbjct: 271 YLAIVCMNLVVPQLFNYLVQYE 292


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.129    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 984,957
Number of Sequences: 2123
Number of extensions: 39254
Number of successful extensions: 52
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 47
Number of HSP's gapped (non-prelim): 9
length of query: 1054
length of database: 516,269
effective HSP length: 71
effective length of query: 983
effective length of database: 365,536
effective search space: 359321888
effective search space used: 359321888
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 53 (25.4 bits)