Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000494-TA|BGIBMGA000494-PA|undefined
(1054 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 30 0.086
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 27 0.61
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 27 1.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 27 1.1
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 25 4.3
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 25 4.3
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 25 4.3
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 25 4.3
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 25 4.3
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 25 4.3
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 25 4.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 25 4.3
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 24 5.6
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 24 5.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 5.6
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 30.3 bits (65), Expect = 0.086
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 521 QILWLENKKKHENTDVSTLKKKQRGALLKLQHECGEMHRMRKALLTLSEKRKDALIKTKK 580
+IL +EN K + +V ++KQR +L +H+ ++ K L+ E +K IK
Sbjct: 395 EILEVENDKILQ--EVIKFRQKQRAEILAKEHKAAADQKLEKHLI---EYKKMLKIKRLF 449
Query: 581 NIELKLKNNVDVEHLIEKKKLKRNGSDRNIVP 612
+ K+ + V E +IE+K+ +N +N+ P
Sbjct: 450 GKDRKIMDMVR-EKIIEEKRKNKN---KNLTP 477
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 27.5 bits (58), Expect = 0.61
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 795 VSLPKLAPIEPRSYQSASTMTCDSSDDN---DDILENLCTYDMVPINKPEYPELEETIPQ 851
V P+ +PIEP S ++++ S +N ++ + + TYD P + P Y E Q
Sbjct: 288 VGSPRDSPIEPEIEISQNSVSTGSDKENHKTEEPNDEVATYDNTPRDFPYYMYSREQYSQ 347
Query: 852 T 852
+
Sbjct: 348 S 348
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 26.6 bits (56), Expect = 1.1
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 132 KNNVKILKQTQNKPITIIHVPFEEKCETRRNEHKNVAPKRIQKTNTI 178
KN +K+L+ +I + EE +RN N A K KTN I
Sbjct: 242 KNQIKLLEIIHGLTKKVIQLKKEEYKSGKRNIIDNSAQKTESKTNNI 288
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 26.6 bits (56), Expect = 1.1
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 42 SKKSNTKEKQSFDTTESNIKMRNLKDKDNIYNNRSTYS 79
+++ +KE + + +N K N + +N YNN + Y+
Sbjct: 304 TERERSKEPKIISSLSNNYKYSNYNNYNNNYNNYNNYN 341
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 4.3
Identities = 17/74 (22%), Positives = 25/74 (33%)
Query: 24 RFCNXXXXXXXXXXNLYNSKKSNTKEKQSFDTTESNIKMRNLKDKDNIYNNRSTYSPVKI 83
R C+ N K N KEK + T N R+ + + N Y N Y +
Sbjct: 2 RSCSRDRNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRE 61
Query: 84 NLSKNIVDTDENSK 97
+ D E +
Sbjct: 62 TSKERSRDRTERER 75
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 4.3
Identities = 17/74 (22%), Positives = 25/74 (33%)
Query: 24 RFCNXXXXXXXXXXNLYNSKKSNTKEKQSFDTTESNIKMRNLKDKDNIYNNRSTYSPVKI 83
R C+ N K N KEK + T N R+ + + N Y N Y +
Sbjct: 2 RSCSRDRNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRE 61
Query: 84 NLSKNIVDTDENSK 97
+ D E +
Sbjct: 62 TSKERSRDRTERER 75
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 4.3
Identities = 17/74 (22%), Positives = 25/74 (33%)
Query: 24 RFCNXXXXXXXXXXNLYNSKKSNTKEKQSFDTTESNIKMRNLKDKDNIYNNRSTYSPVKI 83
R C+ N K N KEK + T N R+ + + N Y N Y +
Sbjct: 2 RSCSRDRNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRE 61
Query: 84 NLSKNIVDTDENSK 97
+ D E +
Sbjct: 62 TSKERSRDRTERER 75
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 4.3
Identities = 17/74 (22%), Positives = 25/74 (33%)
Query: 24 RFCNXXXXXXXXXXNLYNSKKSNTKEKQSFDTTESNIKMRNLKDKDNIYNNRSTYSPVKI 83
R C+ N K N KEK + T N R+ + + N Y N Y +
Sbjct: 2 RSCSRDRNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRE 61
Query: 84 NLSKNIVDTDENSK 97
+ D E +
Sbjct: 62 TSKERSRDRTERER 75
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 4.3
Identities = 17/74 (22%), Positives = 25/74 (33%)
Query: 24 RFCNXXXXXXXXXXNLYNSKKSNTKEKQSFDTTESNIKMRNLKDKDNIYNNRSTYSPVKI 83
R C+ N K N KEK + T N R+ + + N Y N Y +
Sbjct: 2 RSCSRDRNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRE 61
Query: 84 NLSKNIVDTDENSK 97
+ D E +
Sbjct: 62 TSKERSRDRTERER 75
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 4.3
Identities = 17/74 (22%), Positives = 25/74 (33%)
Query: 24 RFCNXXXXXXXXXXNLYNSKKSNTKEKQSFDTTESNIKMRNLKDKDNIYNNRSTYSPVKI 83
R C+ N K N KEK + T N R+ + + N Y N Y +
Sbjct: 2 RSCSRDRNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRE 61
Query: 84 NLSKNIVDTDENSK 97
+ D E +
Sbjct: 62 TSKERSRDRTERER 75
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 4.3
Identities = 17/74 (22%), Positives = 25/74 (33%)
Query: 24 RFCNXXXXXXXXXXNLYNSKKSNTKEKQSFDTTESNIKMRNLKDKDNIYNNRSTYSPVKI 83
R C+ N K N KEK + T N R+ + + N Y N Y +
Sbjct: 2 RSCSRDRNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRE 61
Query: 84 NLSKNIVDTDENSK 97
+ D E +
Sbjct: 62 TSKERSRDRTERER 75
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 24.6 bits (51), Expect = 4.3
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 132 KNNVKILKQTQNKPITIIHVPFEEKCETRRNEHKNVAPKRIQKTNT 177
KN + ++NK + + P E N K PK+ +KT T
Sbjct: 754 KNKKNVGSMSRNKALLPVIKPANVNKEQSPNSTKETTPKKERKTAT 799
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 24.2 bits (50), Expect = 5.6
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 42 SKKSNTKEKQSFDTTESNIKMRNLKDKDNIYNN--RSTYSPVKINLSKNIV 90
+++ +KE + + +N K N + +N YNN + Y+ L KN +
Sbjct: 71 TERETSKEPKIISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLYKNYI 121
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 24.2 bits (50), Expect = 5.6
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 42 SKKSNTKEKQSFDTTESNIKMRNLKDKDNIYNN--RSTYSPVKINLSKNIV 90
+++ +KE + + +N K N + +N YNN + Y+ L KN +
Sbjct: 71 TERETSKEPKIISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLYKNYI 121
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 24.2 bits (50), Expect = 5.6
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 558 HRMRKALLTLSEKRKDALIKTKKNIELKLKNNVDVEHLIEKKKLKRNGS 606
HR ++ + S+K KD+ IKT + + + V + +KR+GS
Sbjct: 659 HREFRSSIKASDKLKDSRIKTTEKLSTDPNTHFQVN---QSHGIKRSGS 704
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.313 0.129 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 283,891
Number of Sequences: 429
Number of extensions: 12781
Number of successful extensions: 28
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 15
length of query: 1054
length of database: 140,377
effective HSP length: 65
effective length of query: 989
effective length of database: 112,492
effective search space: 111254588
effective search space used: 111254588
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 48 (23.4 bits)
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