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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000492-TA|BGIBMGA000492-PA|IPR001245|Tyrosine protein
kinase, IPR011009|Protein kinase-like, IPR000719|Protein kinase
         (153 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0148 - 1051121-1051192,1051378-1051512,1052343-1052396,105...    34   0.058
09_06_0146 + 21186889-21187178,21187321-21187435,21188595-211886...    33   0.076
06_03_0860 + 25484826-25485758,25486155-25486406                       33   0.076
01_01_0712 - 5509748-5509990,5510099-5510554,5510959-5511951           32   0.18 
02_04_0451 + 23021139-23021269,23021366-23021498,23021594-230217...    31   0.31 
06_03_0927 + 26015956-26018230,26018323-26018471,26018550-260186...    31   0.41 
02_05_0717 + 31190626-31191234,31191954-31192394,31192699-311928...    31   0.41 
03_02_0670 - 10303538-10303930,10304349-10305444,10305831-10306228     31   0.54 
02_05_0999 + 33405982-33408279,33408356-33408466,33408551-334087...    31   0.54 
12_01_0410 - 3234836-3234958,3235636-3235776,3235899-3235949,323...    30   0.71 
03_06_0447 - 33989301-33989609,33990084-33990242,33990535-339906...    30   0.71 
06_01_0569 + 4019254-4021996,4022121-4022272,4022356-4022427,402...    30   0.94 
05_07_0282 + 28934359-28936458                                         29   1.6  
07_03_0169 + 14670994-14673714,14673799-14673879,14675460-146756...    29   2.2  
02_04_0002 - 18825310-18825873                                         29   2.2  
01_05_0252 - 19959347-19959541,19960307-19960402,19961028-199611...    28   2.9  
08_01_0778 + 7548307-7549220,7551682-7552021                           28   3.8  
06_01_0721 - 5255422-5255790,5256287-5256660,5256845-5257192,525...    28   3.8  
01_01_0052 - 391398-391691,392243-392647                               28   3.8  
06_01_0952 - 7336609-7337858,7337989-7338073                           27   5.0  
04_04_1115 + 31008213-31008707,31009385-31009689,31010848-310111...    27   5.0  
01_06_0691 - 31268729-31269010,31269596-31270051,31270560-31271735     27   5.0  
10_08_0105 - 14828097-14828226,14828371-14828547,14829690-148297...    27   6.6  
07_03_0356 - 17142019-17142899,17145251-17145290,17145381-171455...    27   6.6  
03_05_0176 + 21546952-21547887,21548856-21548921,21549959-215508...    27   6.6  
12_02_0973 + 24959440-24959451,24959962-24962195,24962539-249626...    27   8.7  
11_04_0167 + 14382976-14385244,14389373-14389842                       27   8.7  
07_03_0973 + 23053441-23054295                                         27   8.7  
07_01_0300 - 2164188-2165437,2165568-2165652                           27   8.7  

>02_01_0148 -
           1051121-1051192,1051378-1051512,1052343-1052396,
           1052501-1052581,1052667-1052826,1053346-1053453,
           1053543-1053718,1053952-1054002,1054154-1054264,
           1054493-1054547,1055667-1055789,1055922-1056007,
           1056235-1056349,1056429-1056667
          Length = 521

 Score = 33.9 bits (74), Expect = 0.058
 Identities = 11/30 (36%), Positives = 20/30 (66%)

Query: 114 ELYDLMHECWRREPIQRPRFHDLHRFLERM 143
           +L +L+ +CW R+P +RP F  +   L+R+
Sbjct: 466 KLSELLQKCWHRDPAERPDFSQILEILQRL 495


>09_06_0146 +
           21186889-21187178,21187321-21187435,21188595-21188686,
           21188839-21188952,21189139-21189193,21189348-21189458,
           21190226-21190279,21190362-21190537,21190623-21190730,
           21191332-21191405,21191500-21191675,21192169-21192264,
           21192534-21192614,21192713-21192766,21193246-21193380,
           21193453-21193533
          Length = 603

 Score = 33.5 bits (73), Expect = 0.076
 Identities = 11/30 (36%), Positives = 22/30 (73%)

Query: 114 ELYDLMHECWRREPIQRPRFHDLHRFLERM 143
           +L +L+ +CW++EP +RP F ++   L+R+
Sbjct: 545 KLSELLQKCWQQEPAERPDFSEILETLQRI 574


>06_03_0860 + 25484826-25485758,25486155-25486406
          Length = 394

 Score = 33.5 bits (73), Expect = 0.076
 Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 12/143 (8%)

Query: 8   RNVTVSEELNVKVSDYAMFCEEFVGDYHVMADGTRIPLRWMAWEWYVLSSQ-RCMVIRSY 66
           +N+ +++E+ VKV+D+   C E          G +   RWMA E        R + + S+
Sbjct: 226 QNLLLNDEMRVKVADFGTSCLETACQ---ATKGNKGTYRWMAPEMTKEKPYTRKVDVYSF 282

Query: 67  CLGGPHYCT-VRPFEEMNDDQVVGNASEWRCGGRNXXXXXXXXXXXXXELYDLMHECWRR 125
            +      T + PF+ M   Q    ASE     +N              L +L+  CW  
Sbjct: 283 GIVLWELTTCLLPFQGMTPVQAAYAASE-----KNLRPPLSTSCSPV--LNNLIKRCWSA 335

Query: 126 EPIQRPRFHDLHRFLERMTHGYK 148
            P +RP F  +   LE+  H  K
Sbjct: 336 NPARRPEFSYIVSVLEKYDHCVK 358


>01_01_0712 - 5509748-5509990,5510099-5510554,5510959-5511951
          Length = 563

 Score = 32.3 bits (70), Expect = 0.18
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)

Query: 9   NVTVSEELNVKVSDYAMFCEEFVGDYHVMADGTRIPLRWMAWE 51
           N+   E   VK++D+ + CEE + D  V  +GT    RWMA E
Sbjct: 399 NILFDENFCVKIADFGIACEESMCDVLVEDEGT---YRWMAPE 438


>02_04_0451 +
           23021139-23021269,23021366-23021498,23021594-23021789,
           23023376-23023737,23024049-23024363
          Length = 378

 Score = 31.5 bits (68), Expect = 0.31
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 114 ELYDLMHECWRREPIQRPRFHDLHRFLERMTHGYKPP 150
           EL +++  CW+ EP +RP F  + + L        PP
Sbjct: 286 ELSEILTTCWKEEPNERPNFTQIVQMLLHYLSTLSPP 322


>06_03_0927 + 26015956-26018230,26018323-26018471,26018550-26018618,
            26018701-26018853,26018927-26019090,26019207-26019354,
            26020348-26020470,26020560-26020647,26020781-26020950
          Length = 1112

 Score = 31.1 bits (67), Expect = 0.41
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 114  ELYDLMHECWRREPIQRPRFHDLHRFLERMTHGYK 148
            E   LM +CW  EP +RP F ++   L  M   +K
Sbjct: 1075 EWRSLMEQCWSTEPSERPTFTEIAGRLRSMAASHK 1109


>02_05_0717 + 31190626-31191234,31191954-31192394,31192699-31192802,
            31193000-31194384,31194508-31194548,31195065-31195133,
            31195335-31195435,31195747-31195825,31195939-31196037,
            31196119-31196187,31197609-31197658,31197749-31197925,
            31198045-31198152,31198224-31198290
          Length = 1132

 Score = 31.1 bits (67), Expect = 0.41
 Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 13/148 (8%)

Query: 9    NVTVSEELNVKVSDYAMFCEEFVGDYHVMADGTRIPLRWMAWEWY--VLSSQRCMVIRSY 66
            N+ V +   VKV D+ +   +      + +  T     WMA E      S ++C V  SY
Sbjct: 966  NLLVDKNWVVKVCDFGL--SKMKNKTFLSSRSTAGTAEWMAPEVLRNEPSDEKCDVF-SY 1022

Query: 67   CLGGPHYCTV-RPFEEMNDDQVVGNASEWRCGGRNXXXXXXXXXXXXXELYDLMHECWRR 125
             +     CT+ +P+E MN  QVVG       G +N              + +++ +CW+ 
Sbjct: 1023 GVILWELCTLLQPWEGMNAMQVVGAV-----GFQNRRLDIPDNTDPA--IAEIIAKCWQT 1075

Query: 126  EPIQRPRFHDLHRFLERMTHGYKPPANR 153
            +P  RP F D+   L+ +       A R
Sbjct: 1076 DPKLRPSFADIMASLKPLLKNMTAQAPR 1103


>03_02_0670 - 10303538-10303930,10304349-10305444,10305831-10306228
          Length = 628

 Score = 30.7 bits (66), Expect = 0.54
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 115 LYDLMHECWRREPIQRPRFHDLHRFLER 142
           L  LM  CW   P++RP+F ++   L+R
Sbjct: 597 LRSLMTRCWDNNPLKRPQFSEIISMLQR 624


>02_05_0999 + 33405982-33408279,33408356-33408466,33408551-33408703,
            33408870-33409033,33409113-33409210,33409296-33409474,
            33409588-33409675,33410285-33410451
          Length = 1085

 Score = 30.7 bits (66), Expect = 0.54
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 114  ELYDLMHECWRREPIQRPRFHDLHRFLERM 143
            E   LM  CW  EP  RP F ++ + L +M
Sbjct: 1049 EWKSLMENCWASEPADRPSFTEISQRLRKM 1078


>12_01_0410 -
           3234836-3234958,3235636-3235776,3235899-3235949,
           3236045-3236125,3236427-3236483,3236898-3236993,
           3237204-3237379,3237630-3237703,3237909-3238016,
           3238100-3238236,3238396-3238446,3239032-3239142,
           3239291-3239363,3240322-3240398,3240641-3240706,
           3241349-3241463,3242255-3242511
          Length = 597

 Score = 30.3 bits (65), Expect = 0.71
 Identities = 13/28 (46%), Positives = 15/28 (53%)

Query: 114 ELYDLMHECWRREPIQRPRFHDLHRFLE 141
           +L DLM  CW   P  RP F D+   LE
Sbjct: 523 QLLDLMRRCWEGIPSNRPPFSDILAELE 550


>03_06_0447 -
           33989301-33989609,33990084-33990242,33990535-33990659,
           33991141-33991336,33991490-33991622,33992246-33992475
          Length = 383

 Score = 30.3 bits (65), Expect = 0.71
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 114 ELYDLMHECWRREPIQRPRFHDLHRFLERMTHGYKPP 150
           EL  ++  CW  +P  RP F  + R L+       PP
Sbjct: 294 ELVFIVQSCWVEDPAMRPSFSQIIRMLDAFLMTIPPP 330


>06_01_0569 + 4019254-4021996,4022121-4022272,4022356-4022427,
            4022521-4022673,4022749-4022912,4022990-4023137,
            4023530-4023652,4023774-4023861,4023951-4024129
          Length = 1273

 Score = 29.9 bits (64), Expect = 0.94
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 118  LMHECWRREPIQRPRFHDLHRFLERM 143
            LM +CW  EP +RP F ++ + L  M
Sbjct: 1237 LMEQCWSSEPSERPSFTEVGKRLRAM 1262


>05_07_0282 + 28934359-28936458
          Length = 699

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 115 LYDLMHECWRREPIQRPRFHDLHRFL 140
           L  L   CW  E  QRP FH + R L
Sbjct: 464 LTSLTRRCWHGEAAQRPPFHSICRVL 489


>07_03_0169 + 14670994-14673714,14673799-14673879,14675460-14675612,
            14675910-14676073,14676162-14676309,14676426-14676548,
            14676754-14676841,14677493-14677674
          Length = 1219

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 118  LMHECWRREPIQRPRFHDLHRFLERMT 144
            LM +CW  +P QRP F ++   L  M+
Sbjct: 1182 LMEQCWAPDPSQRPAFTEIAGRLRAMS 1208


>02_04_0002 - 18825310-18825873
          Length = 187

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 63  IRSYCLGGPHYCTVRPFEEMNDDQVVGNASEWRCGG 98
           +RS C  GP        EE  +D+ V     W CGG
Sbjct: 115 LRSPCGCGPSATEAADQEEEEEDEEVDQYGAWECGG 150


>01_05_0252 -
           19959347-19959541,19960307-19960402,19961028-19961132,
           19961220-19961439,19961515-19961584,19961659-19962181,
           19962621-19962672,19963644-19963867,19963955-19964022,
           19965005-19965231,19965747-19965864,19965938-19966058
          Length = 672

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 115 LYDLMHECWRREPIQRPRFHDL 136
           L  L+  CW  +P QRP F D+
Sbjct: 308 LLSLIQRCWDSDPQQRPSFKDI 329


>08_01_0778 + 7548307-7549220,7551682-7552021
          Length = 417

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 115 LYDLMHECWRREPIQRPRFHDLHRFLERM 143
           L ++M  CW   P  RP F ++ R LE++
Sbjct: 365 LAEIMTRCWDANPDARPPFTEVVRMLEQV 393


>06_01_0721 -
           5255422-5255790,5256287-5256660,5256845-5257192,
           5257369-5257497,5257585-5257658,5257745-5257816,
           5257901-5257969,5258059-5258130,5258208-5258279,
           5258512-5258583,5258735-5258806,5258887-5258958,
           5259050-5259121,5259203-5259274,5259427-5259498,
           5259599-5259670,5259764-5259832,5260072-5260143,
           5260428-5260499,5260579-5260650,5260919-5260990,
           5261015-5261161,5261249-5261378,5262212-5262290
          Length = 931

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 11/37 (29%), Positives = 20/37 (54%)

Query: 114 ELYDLMHECWRREPIQRPRFHDLHRFLERMTHGYKPP 150
           +++ L   C +R+P  RP  H++ R L+ +     PP
Sbjct: 839 KVFQLALLCTKRQPSDRPTMHEVVRVLDCLVRPDPPP 875


>01_01_0052 - 391398-391691,392243-392647
          Length = 232

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 118 LMHECWRREPIQRPRFHDLHRFLE 141
           L+ +CW   P +RP+F D+   LE
Sbjct: 152 LITQCWATNPDRRPQFDDIVAILE 175


>06_01_0952 - 7336609-7337858,7337989-7338073
          Length = 444

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 5/88 (5%)

Query: 9   NVTVSEELNVKVSDYAMFCEEFVGDYHVMADGTRIPLRWMAWEWYVLS--SQRCMVIRSY 66
           NV +   L  KV+D+ +      GD HV   G R    + A E ++ +  +++C V   Y
Sbjct: 241 NVLLDGGLTPKVADFGLARLASRGDTHVSVSGMRGTPGYAAPEMWMQAGVTEKCDV---Y 297

Query: 67  CLGGPHYCTVRPFEEMNDDQVVGNASEW 94
             G   +  VR    ++D    G+  +W
Sbjct: 298 SFGVLLFEIVRRRRNLDDGGAPGSQQQW 325


>04_04_1115 +
           31008213-31008707,31009385-31009689,31010848-31011108,
           31011193-31011401,31011490-31011783,31011861-31011901,
           31011987-31012055,31012164-31012264,31012351-31012435,
           31012539-31012637,31012731-31012799,31012909-31013040,
           31013128-31013222,31013340-31013421
          Length = 778

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 11/137 (8%)

Query: 9   NVTVSEELNVKVSDYAMFCEEFVGDYHVMADGTRIPLRWMAWEWY--VLSSQRCMVIRSY 66
           N+ V +  +VKV D+ +    F  +  + +        WMA E+     S+++C V    
Sbjct: 643 NMLVDKNWSVKVGDFGL--SRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKCDVYSFG 700

Query: 67  CLGGPHYCTVRPFEEMNDDQVVGNASEWRCGGRNXXXXXXXXXXXXXELYDLMHECWRRE 126
            +        +P+  ++  QVVG  +                     EL  L+  CW  +
Sbjct: 701 VILWELMTMQQPWNGLSPAQVVGAVAFQN-------RRLPIPQETVPELAALVESCWDDD 753

Query: 127 PIQRPRFHDLHRFLERM 143
           P QRP F  +   L+++
Sbjct: 754 PRQRPSFSSIVDTLKKL 770


>01_06_0691 - 31268729-31269010,31269596-31270051,31270560-31271735
          Length = 637

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 12/136 (8%)

Query: 9   NVTVSEELNVKVSDYAMFCEEFVGDYHVMADGTRIPLRWMAWEWYVLSSQ-RCMVIRSYC 67
           N+    E   K+ D+ + CEE   D      GT    RWMA E        R + + S+ 
Sbjct: 460 NIIFDSEFCAKIVDFGISCEEAECDPLANDTGT---FRWMAPEMMKHKPYGRKVDVYSFG 516

Query: 68  LGGPHYCTVR-PFEEMNDDQVVGNASEWRCGGRNXXXXXXXXXXXXXELYDLMHECWRRE 126
           L      T   P+E++N  Q      +     +N              L  L+ +CW  +
Sbjct: 517 LILWEMFTGSVPYEDLNPFQAAFAVFD-----KNERPVIPSSCPAPLRL--LIEQCWASQ 569

Query: 127 PIQRPRFHDLHRFLER 142
           P +RP F  + + L++
Sbjct: 570 PDKRPEFWQIVQILDK 585


>10_08_0105 -
           14828097-14828226,14828371-14828547,14829690-14829739,
           14829841-14829909,14829976-14830074,14830148-14830226,
           14830587-14830687,14830794-14830862,14831019-14831059,
           14831313-14831663,14831676-14832511,14832674-14832777,
           14833587-14834003,14836108-14836491
          Length = 968

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 8/26 (30%), Positives = 16/26 (61%)

Query: 118 LMHECWRREPIQRPRFHDLHRFLERM 143
           ++ +CW+++P  RP F  L  +L  +
Sbjct: 919 IIQDCWQKDPNLRPSFSQLTSYLNTL 944


>07_03_0356 -
           17142019-17142899,17145251-17145290,17145381-17145512,
           17145762-17145815,17145913-17145993,17146860-17146955,
           17147439-17147611,17147750-17147823,17148515-17148622,
           17148693-17148868,17149305-17149352,17150665-17150775,
           17152172-17152226,17153434-17153534,17154176-17154290,
           17155505-17155698
          Length = 812

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 8/22 (36%), Positives = 15/22 (68%)

Query: 115 LYDLMHECWRREPIQRPRFHDL 136
           L  L+ +CW+++P  RP F ++
Sbjct: 476 LAGLLQKCWQKDPALRPTFSEI 497


>03_05_0176 +
           21546952-21547887,21548856-21548921,21549959-21550877,
           21551277-21551449,21551927-21552475
          Length = 880

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 118 LMHECWRREPIQRPRFHDLHRFLE 141
           L+  CW  EP +RP F  +   LE
Sbjct: 277 LIKRCWSTEPARRPEFKQIVSVLE 300


>12_02_0973 + 24959440-24959451,24959962-24962195,24962539-24962653,
            24963146-24963943,24964140-24964422,24964500-24964951,
            24965744-24965870,24965950-24966074,24966188-24966858,
            24966976-24967093,24967177-24967293,24967564-24967658,
            24968152-24968303,24968858-24968913,24969001-24969218,
            24969842-24970239,24970345-24970628,24970730-24970836,
            24970882-24970968,24971729-24971990,24972228-24972503,
            24973197-24973254,24973437-24973756,24973889-24973999,
            24974183-24974350,24974494-24974622,24974731-24974820,
            24974934-24975040,24975133-24975281,24975584-24975666,
            24975749-24975844,24975957-24976079,24976180-24976263,
            24976371-24976511,24976652-24976951,24977386-24977453,
            24977540-24977642,24979363-24979524,24979613-24981230,
            24981270-24981661,24981689-24981991,24982078-24982161,
            24982296-24982448,24982678-24982841,24982915-24983062,
            24983209-24983331,24983409-24983496,24983686-24983867
          Length = 4177

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 114  ELYDLMHECWRREPIQRPRFHDLHRFLERMTHGYK 148
            E   LM +CW  +P  RP F ++   L  M+   K
Sbjct: 4136 EWRQLMEQCWSADPDIRPSFTEVTDRLRAMSSALK 4170


>11_04_0167 + 14382976-14385244,14389373-14389842
          Length = 912

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 114 ELYDLMHECWRREPIQRPRF-HDLHRFLERMTHGYKP 149
           E+ DL   C  REP QRP   H ++R L  +   +KP
Sbjct: 829 EVADLARHCTAREPYQRPDMCHCVNR-LSSLVDQWKP 864


>07_03_0973 + 23053441-23054295
          Length = 284

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 29  EFVGDYHVMADGTRIPLRWMAWEWYVLSSQRCMV 62
           +F G+  V  DG  + + W   +W   SS +C V
Sbjct: 210 KFRGNQTVYVDGLPVEVLWDVHDWLFGSSNKCAV 243


>07_01_0300 - 2164188-2165437,2165568-2165652
          Length = 444

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 5/88 (5%)

Query: 9   NVTVSEELNVKVSDYAMFCEEFVGDYHVMADGTRIPLRWMAWEWYVLS--SQRCMVIRSY 66
           NV +   L  KV+D+ +      GD HV   G R    + A E ++ +  +++C V   Y
Sbjct: 241 NVLLDGGLTPKVADFGLARLASRGDTHVSVSGMRGTPGYAAPEMWMQAGVTEKCDV---Y 297

Query: 67  CLGGPHYCTVRPFEEMNDDQVVGNASEW 94
             G   +  VR    ++D    G+  +W
Sbjct: 298 SFGVHLFEIVRRRRNLDDGGEPGSQHQW 325


  Database: rice
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.326    0.140    0.485 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,862,641
Number of Sequences: 37544
Number of extensions: 178937
Number of successful extensions: 475
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 447
Number of HSP's gapped (non-prelim): 32
length of query: 153
length of database: 14,793,348
effective HSP length: 76
effective length of query: 77
effective length of database: 11,940,004
effective search space: 919380308
effective search space used: 919380308
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 56 (26.6 bits)

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