BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000492-TA|BGIBMGA000492-PA|IPR001245|Tyrosine protein kinase, IPR011009|Protein kinase-like, IPR000719|Protein kinase (153 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_01_0148 - 1051121-1051192,1051378-1051512,1052343-1052396,105... 34 0.058 09_06_0146 + 21186889-21187178,21187321-21187435,21188595-211886... 33 0.076 06_03_0860 + 25484826-25485758,25486155-25486406 33 0.076 01_01_0712 - 5509748-5509990,5510099-5510554,5510959-5511951 32 0.18 02_04_0451 + 23021139-23021269,23021366-23021498,23021594-230217... 31 0.31 06_03_0927 + 26015956-26018230,26018323-26018471,26018550-260186... 31 0.41 02_05_0717 + 31190626-31191234,31191954-31192394,31192699-311928... 31 0.41 03_02_0670 - 10303538-10303930,10304349-10305444,10305831-10306228 31 0.54 02_05_0999 + 33405982-33408279,33408356-33408466,33408551-334087... 31 0.54 12_01_0410 - 3234836-3234958,3235636-3235776,3235899-3235949,323... 30 0.71 03_06_0447 - 33989301-33989609,33990084-33990242,33990535-339906... 30 0.71 06_01_0569 + 4019254-4021996,4022121-4022272,4022356-4022427,402... 30 0.94 05_07_0282 + 28934359-28936458 29 1.6 07_03_0169 + 14670994-14673714,14673799-14673879,14675460-146756... 29 2.2 02_04_0002 - 18825310-18825873 29 2.2 01_05_0252 - 19959347-19959541,19960307-19960402,19961028-199611... 28 2.9 08_01_0778 + 7548307-7549220,7551682-7552021 28 3.8 06_01_0721 - 5255422-5255790,5256287-5256660,5256845-5257192,525... 28 3.8 01_01_0052 - 391398-391691,392243-392647 28 3.8 06_01_0952 - 7336609-7337858,7337989-7338073 27 5.0 04_04_1115 + 31008213-31008707,31009385-31009689,31010848-310111... 27 5.0 01_06_0691 - 31268729-31269010,31269596-31270051,31270560-31271735 27 5.0 10_08_0105 - 14828097-14828226,14828371-14828547,14829690-148297... 27 6.6 07_03_0356 - 17142019-17142899,17145251-17145290,17145381-171455... 27 6.6 03_05_0176 + 21546952-21547887,21548856-21548921,21549959-215508... 27 6.6 12_02_0973 + 24959440-24959451,24959962-24962195,24962539-249626... 27 8.7 11_04_0167 + 14382976-14385244,14389373-14389842 27 8.7 07_03_0973 + 23053441-23054295 27 8.7 07_01_0300 - 2164188-2165437,2165568-2165652 27 8.7 >02_01_0148 - 1051121-1051192,1051378-1051512,1052343-1052396, 1052501-1052581,1052667-1052826,1053346-1053453, 1053543-1053718,1053952-1054002,1054154-1054264, 1054493-1054547,1055667-1055789,1055922-1056007, 1056235-1056349,1056429-1056667 Length = 521 Score = 33.9 bits (74), Expect = 0.058 Identities = 11/30 (36%), Positives = 20/30 (66%) Query: 114 ELYDLMHECWRREPIQRPRFHDLHRFLERM 143 +L +L+ +CW R+P +RP F + L+R+ Sbjct: 466 KLSELLQKCWHRDPAERPDFSQILEILQRL 495 >09_06_0146 + 21186889-21187178,21187321-21187435,21188595-21188686, 21188839-21188952,21189139-21189193,21189348-21189458, 21190226-21190279,21190362-21190537,21190623-21190730, 21191332-21191405,21191500-21191675,21192169-21192264, 21192534-21192614,21192713-21192766,21193246-21193380, 21193453-21193533 Length = 603 Score = 33.5 bits (73), Expect = 0.076 Identities = 11/30 (36%), Positives = 22/30 (73%) Query: 114 ELYDLMHECWRREPIQRPRFHDLHRFLERM 143 +L +L+ +CW++EP +RP F ++ L+R+ Sbjct: 545 KLSELLQKCWQQEPAERPDFSEILETLQRI 574 >06_03_0860 + 25484826-25485758,25486155-25486406 Length = 394 Score = 33.5 bits (73), Expect = 0.076 Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 12/143 (8%) Query: 8 RNVTVSEELNVKVSDYAMFCEEFVGDYHVMADGTRIPLRWMAWEWYVLSSQ-RCMVIRSY 66 +N+ +++E+ VKV+D+ C E G + RWMA E R + + S+ Sbjct: 226 QNLLLNDEMRVKVADFGTSCLETACQ---ATKGNKGTYRWMAPEMTKEKPYTRKVDVYSF 282 Query: 67 CLGGPHYCT-VRPFEEMNDDQVVGNASEWRCGGRNXXXXXXXXXXXXXELYDLMHECWRR 125 + T + PF+ M Q ASE +N L +L+ CW Sbjct: 283 GIVLWELTTCLLPFQGMTPVQAAYAASE-----KNLRPPLSTSCSPV--LNNLIKRCWSA 335 Query: 126 EPIQRPRFHDLHRFLERMTHGYK 148 P +RP F + LE+ H K Sbjct: 336 NPARRPEFSYIVSVLEKYDHCVK 358 >01_01_0712 - 5509748-5509990,5510099-5510554,5510959-5511951 Length = 563 Score = 32.3 bits (70), Expect = 0.18 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%) Query: 9 NVTVSEELNVKVSDYAMFCEEFVGDYHVMADGTRIPLRWMAWE 51 N+ E VK++D+ + CEE + D V +GT RWMA E Sbjct: 399 NILFDENFCVKIADFGIACEESMCDVLVEDEGT---YRWMAPE 438 >02_04_0451 + 23021139-23021269,23021366-23021498,23021594-23021789, 23023376-23023737,23024049-23024363 Length = 378 Score = 31.5 bits (68), Expect = 0.31 Identities = 12/37 (32%), Positives = 19/37 (51%) Query: 114 ELYDLMHECWRREPIQRPRFHDLHRFLERMTHGYKPP 150 EL +++ CW+ EP +RP F + + L PP Sbjct: 286 ELSEILTTCWKEEPNERPNFTQIVQMLLHYLSTLSPP 322 >06_03_0927 + 26015956-26018230,26018323-26018471,26018550-26018618, 26018701-26018853,26018927-26019090,26019207-26019354, 26020348-26020470,26020560-26020647,26020781-26020950 Length = 1112 Score = 31.1 bits (67), Expect = 0.41 Identities = 13/35 (37%), Positives = 18/35 (51%) Query: 114 ELYDLMHECWRREPIQRPRFHDLHRFLERMTHGYK 148 E LM +CW EP +RP F ++ L M +K Sbjct: 1075 EWRSLMEQCWSTEPSERPTFTEIAGRLRSMAASHK 1109 >02_05_0717 + 31190626-31191234,31191954-31192394,31192699-31192802, 31193000-31194384,31194508-31194548,31195065-31195133, 31195335-31195435,31195747-31195825,31195939-31196037, 31196119-31196187,31197609-31197658,31197749-31197925, 31198045-31198152,31198224-31198290 Length = 1132 Score = 31.1 bits (67), Expect = 0.41 Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 13/148 (8%) Query: 9 NVTVSEELNVKVSDYAMFCEEFVGDYHVMADGTRIPLRWMAWEWY--VLSSQRCMVIRSY 66 N+ V + VKV D+ + + + + T WMA E S ++C V SY Sbjct: 966 NLLVDKNWVVKVCDFGL--SKMKNKTFLSSRSTAGTAEWMAPEVLRNEPSDEKCDVF-SY 1022 Query: 67 CLGGPHYCTV-RPFEEMNDDQVVGNASEWRCGGRNXXXXXXXXXXXXXELYDLMHECWRR 125 + CT+ +P+E MN QVVG G +N + +++ +CW+ Sbjct: 1023 GVILWELCTLLQPWEGMNAMQVVGAV-----GFQNRRLDIPDNTDPA--IAEIIAKCWQT 1075 Query: 126 EPIQRPRFHDLHRFLERMTHGYKPPANR 153 +P RP F D+ L+ + A R Sbjct: 1076 DPKLRPSFADIMASLKPLLKNMTAQAPR 1103 >03_02_0670 - 10303538-10303930,10304349-10305444,10305831-10306228 Length = 628 Score = 30.7 bits (66), Expect = 0.54 Identities = 11/28 (39%), Positives = 17/28 (60%) Query: 115 LYDLMHECWRREPIQRPRFHDLHRFLER 142 L LM CW P++RP+F ++ L+R Sbjct: 597 LRSLMTRCWDNNPLKRPQFSEIISMLQR 624 >02_05_0999 + 33405982-33408279,33408356-33408466,33408551-33408703, 33408870-33409033,33409113-33409210,33409296-33409474, 33409588-33409675,33410285-33410451 Length = 1085 Score = 30.7 bits (66), Expect = 0.54 Identities = 12/30 (40%), Positives = 16/30 (53%) Query: 114 ELYDLMHECWRREPIQRPRFHDLHRFLERM 143 E LM CW EP RP F ++ + L +M Sbjct: 1049 EWKSLMENCWASEPADRPSFTEISQRLRKM 1078 >12_01_0410 - 3234836-3234958,3235636-3235776,3235899-3235949, 3236045-3236125,3236427-3236483,3236898-3236993, 3237204-3237379,3237630-3237703,3237909-3238016, 3238100-3238236,3238396-3238446,3239032-3239142, 3239291-3239363,3240322-3240398,3240641-3240706, 3241349-3241463,3242255-3242511 Length = 597 Score = 30.3 bits (65), Expect = 0.71 Identities = 13/28 (46%), Positives = 15/28 (53%) Query: 114 ELYDLMHECWRREPIQRPRFHDLHRFLE 141 +L DLM CW P RP F D+ LE Sbjct: 523 QLLDLMRRCWEGIPSNRPPFSDILAELE 550 >03_06_0447 - 33989301-33989609,33990084-33990242,33990535-33990659, 33991141-33991336,33991490-33991622,33992246-33992475 Length = 383 Score = 30.3 bits (65), Expect = 0.71 Identities = 12/37 (32%), Positives = 17/37 (45%) Query: 114 ELYDLMHECWRREPIQRPRFHDLHRFLERMTHGYKPP 150 EL ++ CW +P RP F + R L+ PP Sbjct: 294 ELVFIVQSCWVEDPAMRPSFSQIIRMLDAFLMTIPPP 330 >06_01_0569 + 4019254-4021996,4022121-4022272,4022356-4022427, 4022521-4022673,4022749-4022912,4022990-4023137, 4023530-4023652,4023774-4023861,4023951-4024129 Length = 1273 Score = 29.9 bits (64), Expect = 0.94 Identities = 11/26 (42%), Positives = 16/26 (61%) Query: 118 LMHECWRREPIQRPRFHDLHRFLERM 143 LM +CW EP +RP F ++ + L M Sbjct: 1237 LMEQCWSSEPSERPSFTEVGKRLRAM 1262 >05_07_0282 + 28934359-28936458 Length = 699 Score = 29.1 bits (62), Expect = 1.6 Identities = 12/26 (46%), Positives = 13/26 (50%) Query: 115 LYDLMHECWRREPIQRPRFHDLHRFL 140 L L CW E QRP FH + R L Sbjct: 464 LTSLTRRCWHGEAAQRPPFHSICRVL 489 >07_03_0169 + 14670994-14673714,14673799-14673879,14675460-14675612, 14675910-14676073,14676162-14676309,14676426-14676548, 14676754-14676841,14677493-14677674 Length = 1219 Score = 28.7 bits (61), Expect = 2.2 Identities = 11/27 (40%), Positives = 16/27 (59%) Query: 118 LMHECWRREPIQRPRFHDLHRFLERMT 144 LM +CW +P QRP F ++ L M+ Sbjct: 1182 LMEQCWAPDPSQRPAFTEIAGRLRAMS 1208 >02_04_0002 - 18825310-18825873 Length = 187 Score = 28.7 bits (61), Expect = 2.2 Identities = 13/36 (36%), Positives = 16/36 (44%) Query: 63 IRSYCLGGPHYCTVRPFEEMNDDQVVGNASEWRCGG 98 +RS C GP EE +D+ V W CGG Sbjct: 115 LRSPCGCGPSATEAADQEEEEEDEEVDQYGAWECGG 150 >01_05_0252 - 19959347-19959541,19960307-19960402,19961028-19961132, 19961220-19961439,19961515-19961584,19961659-19962181, 19962621-19962672,19963644-19963867,19963955-19964022, 19965005-19965231,19965747-19965864,19965938-19966058 Length = 672 Score = 28.3 bits (60), Expect = 2.9 Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 115 LYDLMHECWRREPIQRPRFHDL 136 L L+ CW +P QRP F D+ Sbjct: 308 LLSLIQRCWDSDPQQRPSFKDI 329 >08_01_0778 + 7548307-7549220,7551682-7552021 Length = 417 Score = 27.9 bits (59), Expect = 3.8 Identities = 11/29 (37%), Positives = 17/29 (58%) Query: 115 LYDLMHECWRREPIQRPRFHDLHRFLERM 143 L ++M CW P RP F ++ R LE++ Sbjct: 365 LAEIMTRCWDANPDARPPFTEVVRMLEQV 393 >06_01_0721 - 5255422-5255790,5256287-5256660,5256845-5257192, 5257369-5257497,5257585-5257658,5257745-5257816, 5257901-5257969,5258059-5258130,5258208-5258279, 5258512-5258583,5258735-5258806,5258887-5258958, 5259050-5259121,5259203-5259274,5259427-5259498, 5259599-5259670,5259764-5259832,5260072-5260143, 5260428-5260499,5260579-5260650,5260919-5260990, 5261015-5261161,5261249-5261378,5262212-5262290 Length = 931 Score = 27.9 bits (59), Expect = 3.8 Identities = 11/37 (29%), Positives = 20/37 (54%) Query: 114 ELYDLMHECWRREPIQRPRFHDLHRFLERMTHGYKPP 150 +++ L C +R+P RP H++ R L+ + PP Sbjct: 839 KVFQLALLCTKRQPSDRPTMHEVVRVLDCLVRPDPPP 875 >01_01_0052 - 391398-391691,392243-392647 Length = 232 Score = 27.9 bits (59), Expect = 3.8 Identities = 10/24 (41%), Positives = 15/24 (62%) Query: 118 LMHECWRREPIQRPRFHDLHRFLE 141 L+ +CW P +RP+F D+ LE Sbjct: 152 LITQCWATNPDRRPQFDDIVAILE 175 >06_01_0952 - 7336609-7337858,7337989-7338073 Length = 444 Score = 27.5 bits (58), Expect = 5.0 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 5/88 (5%) Query: 9 NVTVSEELNVKVSDYAMFCEEFVGDYHVMADGTRIPLRWMAWEWYVLS--SQRCMVIRSY 66 NV + L KV+D+ + GD HV G R + A E ++ + +++C V Y Sbjct: 241 NVLLDGGLTPKVADFGLARLASRGDTHVSVSGMRGTPGYAAPEMWMQAGVTEKCDV---Y 297 Query: 67 CLGGPHYCTVRPFEEMNDDQVVGNASEW 94 G + VR ++D G+ +W Sbjct: 298 SFGVLLFEIVRRRRNLDDGGAPGSQQQW 325 >04_04_1115 + 31008213-31008707,31009385-31009689,31010848-31011108, 31011193-31011401,31011490-31011783,31011861-31011901, 31011987-31012055,31012164-31012264,31012351-31012435, 31012539-31012637,31012731-31012799,31012909-31013040, 31013128-31013222,31013340-31013421 Length = 778 Score = 27.5 bits (58), Expect = 5.0 Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 11/137 (8%) Query: 9 NVTVSEELNVKVSDYAMFCEEFVGDYHVMADGTRIPLRWMAWEWY--VLSSQRCMVIRSY 66 N+ V + +VKV D+ + F + + + WMA E+ S+++C V Sbjct: 643 NMLVDKNWSVKVGDFGL--SRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKCDVYSFG 700 Query: 67 CLGGPHYCTVRPFEEMNDDQVVGNASEWRCGGRNXXXXXXXXXXXXXELYDLMHECWRRE 126 + +P+ ++ QVVG + EL L+ CW + Sbjct: 701 VILWELMTMQQPWNGLSPAQVVGAVAFQN-------RRLPIPQETVPELAALVESCWDDD 753 Query: 127 PIQRPRFHDLHRFLERM 143 P QRP F + L+++ Sbjct: 754 PRQRPSFSSIVDTLKKL 770 >01_06_0691 - 31268729-31269010,31269596-31270051,31270560-31271735 Length = 637 Score = 27.5 bits (58), Expect = 5.0 Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 12/136 (8%) Query: 9 NVTVSEELNVKVSDYAMFCEEFVGDYHVMADGTRIPLRWMAWEWYVLSSQ-RCMVIRSYC 67 N+ E K+ D+ + CEE D GT RWMA E R + + S+ Sbjct: 460 NIIFDSEFCAKIVDFGISCEEAECDPLANDTGT---FRWMAPEMMKHKPYGRKVDVYSFG 516 Query: 68 LGGPHYCTVR-PFEEMNDDQVVGNASEWRCGGRNXXXXXXXXXXXXXELYDLMHECWRRE 126 L T P+E++N Q + +N L L+ +CW + Sbjct: 517 LILWEMFTGSVPYEDLNPFQAAFAVFD-----KNERPVIPSSCPAPLRL--LIEQCWASQ 569 Query: 127 PIQRPRFHDLHRFLER 142 P +RP F + + L++ Sbjct: 570 PDKRPEFWQIVQILDK 585 >10_08_0105 - 14828097-14828226,14828371-14828547,14829690-14829739, 14829841-14829909,14829976-14830074,14830148-14830226, 14830587-14830687,14830794-14830862,14831019-14831059, 14831313-14831663,14831676-14832511,14832674-14832777, 14833587-14834003,14836108-14836491 Length = 968 Score = 27.1 bits (57), Expect = 6.6 Identities = 8/26 (30%), Positives = 16/26 (61%) Query: 118 LMHECWRREPIQRPRFHDLHRFLERM 143 ++ +CW+++P RP F L +L + Sbjct: 919 IIQDCWQKDPNLRPSFSQLTSYLNTL 944 >07_03_0356 - 17142019-17142899,17145251-17145290,17145381-17145512, 17145762-17145815,17145913-17145993,17146860-17146955, 17147439-17147611,17147750-17147823,17148515-17148622, 17148693-17148868,17149305-17149352,17150665-17150775, 17152172-17152226,17153434-17153534,17154176-17154290, 17155505-17155698 Length = 812 Score = 27.1 bits (57), Expect = 6.6 Identities = 8/22 (36%), Positives = 15/22 (68%) Query: 115 LYDLMHECWRREPIQRPRFHDL 136 L L+ +CW+++P RP F ++ Sbjct: 476 LAGLLQKCWQKDPALRPTFSEI 497 >03_05_0176 + 21546952-21547887,21548856-21548921,21549959-21550877, 21551277-21551449,21551927-21552475 Length = 880 Score = 27.1 bits (57), Expect = 6.6 Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 118 LMHECWRREPIQRPRFHDLHRFLE 141 L+ CW EP +RP F + LE Sbjct: 277 LIKRCWSTEPARRPEFKQIVSVLE 300 >12_02_0973 + 24959440-24959451,24959962-24962195,24962539-24962653, 24963146-24963943,24964140-24964422,24964500-24964951, 24965744-24965870,24965950-24966074,24966188-24966858, 24966976-24967093,24967177-24967293,24967564-24967658, 24968152-24968303,24968858-24968913,24969001-24969218, 24969842-24970239,24970345-24970628,24970730-24970836, 24970882-24970968,24971729-24971990,24972228-24972503, 24973197-24973254,24973437-24973756,24973889-24973999, 24974183-24974350,24974494-24974622,24974731-24974820, 24974934-24975040,24975133-24975281,24975584-24975666, 24975749-24975844,24975957-24976079,24976180-24976263, 24976371-24976511,24976652-24976951,24977386-24977453, 24977540-24977642,24979363-24979524,24979613-24981230, 24981270-24981661,24981689-24981991,24982078-24982161, 24982296-24982448,24982678-24982841,24982915-24983062, 24983209-24983331,24983409-24983496,24983686-24983867 Length = 4177 Score = 26.6 bits (56), Expect = 8.7 Identities = 12/35 (34%), Positives = 17/35 (48%) Query: 114 ELYDLMHECWRREPIQRPRFHDLHRFLERMTHGYK 148 E LM +CW +P RP F ++ L M+ K Sbjct: 4136 EWRQLMEQCWSADPDIRPSFTEVTDRLRAMSSALK 4170 >11_04_0167 + 14382976-14385244,14389373-14389842 Length = 912 Score = 26.6 bits (56), Expect = 8.7 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Query: 114 ELYDLMHECWRREPIQRPRF-HDLHRFLERMTHGYKP 149 E+ DL C REP QRP H ++R L + +KP Sbjct: 829 EVADLARHCTAREPYQRPDMCHCVNR-LSSLVDQWKP 864 >07_03_0973 + 23053441-23054295 Length = 284 Score = 26.6 bits (56), Expect = 8.7 Identities = 11/34 (32%), Positives = 17/34 (50%) Query: 29 EFVGDYHVMADGTRIPLRWMAWEWYVLSSQRCMV 62 +F G+ V DG + + W +W SS +C V Sbjct: 210 KFRGNQTVYVDGLPVEVLWDVHDWLFGSSNKCAV 243 >07_01_0300 - 2164188-2165437,2165568-2165652 Length = 444 Score = 26.6 bits (56), Expect = 8.7 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 5/88 (5%) Query: 9 NVTVSEELNVKVSDYAMFCEEFVGDYHVMADGTRIPLRWMAWEWYVLS--SQRCMVIRSY 66 NV + L KV+D+ + GD HV G R + A E ++ + +++C V Y Sbjct: 241 NVLLDGGLTPKVADFGLARLASRGDTHVSVSGMRGTPGYAAPEMWMQAGVTEKCDV---Y 297 Query: 67 CLGGPHYCTVRPFEEMNDDQVVGNASEW 94 G + VR ++D G+ +W Sbjct: 298 SFGVHLFEIVRRRRNLDDGGEPGSQHQW 325 Database: rice Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.326 0.140 0.485 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 4,862,641 Number of Sequences: 37544 Number of extensions: 178937 Number of successful extensions: 475 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 447 Number of HSP's gapped (non-prelim): 32 length of query: 153 length of database: 14,793,348 effective HSP length: 76 effective length of query: 77 effective length of database: 11,940,004 effective search space: 919380308 effective search space used: 919380308 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.7 bits) S2: 56 (26.6 bits)
- SilkBase 1999-2023 -