GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000491-TA|BGIBMGA000491-PA|IPR008979|Galactose-binding
like, IPR000421|Coagulation factor 5/8 type, C-terminal
         (428 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1070|AAX52658.2| 1064|Drosophila melanogaster CG33531-P...   188   1e-47
AE014134-1066|AAF52356.2|  808|Drosophila melanogaster CG31640-P...   180   3e-45
AY113488-1|AAM29493.1|  435|Drosophila melanogaster RE47056p pro...    71   4e-12
X86685-1|CAA60383.1| 1283|Drosophila melanogaster neurexin IV pr...    36   0.14 
BT011472-1|AAR99130.1| 1284|Drosophila melanogaster RE18634p pro...    36   0.14 
AE014296-2104|AAF49951.1| 1284|Drosophila melanogaster CG6827-PA...    36   0.14 
AE014296-2103|AAN12252.1| 1366|Drosophila melanogaster CG6827-PB...    36   0.14 
AE014297-2733|AAF55719.1|  490|Drosophila melanogaster CG4770-PA...    29   9.3  

>AE014134-1070|AAX52658.2| 1064|Drosophila melanogaster CG33531-PA
           protein.
          Length = 1064

 Score =  188 bits (458), Expect = 1e-47
 Identities = 89/236 (37%), Positives = 137/236 (58%), Gaps = 3/236 (1%)

Query: 24  LIPGNVNTYTTKKTTLEAPFIASIVRVFPYAAHPRTACMRVELYGCRWKQALIAYSAPKG 83
           ++PGN+NTY+  +  L+    AS VR++PY+ + RT C+R E+ GC W++ +++YS PKG
Sbjct: 217 VLPGNINTYSEVENVLQPSVFASKVRLYPYSQYDRTVCLRAEIVGCAWEEGIVSYSIPKG 276

Query: 84  GDMQSMTGGAKFEDMSYDGILRKGVMIDGMGQITDSLLGPNDFELPDPMDTRGTRWVGWN 143
             MQ         D +YDG       ++G+GQ+ D   G ++F        +G  W+GW 
Sbjct: 277 --MQRGMD-IDLSDKTYDGYEEGDHYVNGLGQLVDGQRGKDNFRADINGLGKGYEWIGWR 333

Query: 144 KTMQVDEEVQIIFNFSTTRTLFFVDIHTNNMFTKDVQLFKEIEIYFSLEGERWQEDFISM 203
               +   V+IIF F T R L  V IHTNNMF+KDVQ+F   +++FS+ G  +  + +  
Sbjct: 334 NDTLLGRPVEIIFEFETVRNLSAVIIHTNNMFSKDVQVFVHAKVFFSIGGRHFSGEPVQF 393

Query: 204 EPKQDRVSEHARIIHVDLENRTAKHVMMKLYFQHEWILISEVTFKSAPTVVNASVE 259
               D V +HAR + + L +R  ++V + LYF   W++ISE+TF SAP V N + E
Sbjct: 394 SYMPDLVLDHARDVTIKLHHRLGRYVQLHLYFAARWMMISEITFISAPVVGNFTDE 449


>AE014134-1066|AAF52356.2|  808|Drosophila melanogaster CG31640-PA
           protein.
          Length = 808

 Score =  180 bits (439), Expect = 3e-45
 Identities = 84/253 (33%), Positives = 143/253 (56%), Gaps = 6/253 (2%)

Query: 9   YEKFTNRKLNFHMNSLIPGNVNTYTTKKTTLEAPFIASIVRVFPYAAHPRTACMRVELYG 68
           ++K+   K N     ++PGN+NTY+  +  L+    AS +R++PY  + RT C+R E+ G
Sbjct: 80  FDKWQRWK-NIQGKEILPGNINTYSEVENALQPIIFASKIRIYPYGQYDRTVCLRAEIVG 138

Query: 69  CRWKQALIAYSAPKGGDMQSMTGGAKFEDMSYDGILRKGVMIDGMGQITDSLLGPNDFEL 128
           C W++ +++YS PKG   + M       D +YDG  +    +DG+GQ+ D   G ++F  
Sbjct: 139 CPWEEGIVSYSIPKGVQ-RGME--VDLSDKTYDGNEQGDRYVDGLGQLVDGQKGKDNFRT 195

Query: 129 PDPMDTRGTRWVGWNKTMQ--VDEEVQIIFNFSTTRTLFFVDIHTNNMFTKDVQLFKEIE 186
                 +G  W+GW       + + V+I+F F T R    + +HTNNMFTKDVQ+F   +
Sbjct: 196 DIHGFGKGYEWIGWRNDTPGLLGKPVEIVFEFDTVRNFSAIVLHTNNMFTKDVQVFVHAK 255

Query: 187 IYFSLEGERWQEDFISMEPKQDRVSEHARIIHVDLENRTAKHVMMKLYFQHEWILISEVT 246
           ++FS+ G  +  + +      D + +HAR + + L +R  K++ + LYF  +WI++SE++
Sbjct: 256 VFFSIGGRYFSGEPVQFSYMPDTIMDHARDVTIKLHHRVGKYLKINLYFAVKWIMLSEIS 315

Query: 247 FKSAPTVVNASVE 259
           F S P + N + E
Sbjct: 316 FISVPAMGNFTDE 328


>AY113488-1|AAM29493.1|  435|Drosophila melanogaster RE47056p
           protein.
          Length = 435

 Score = 70.5 bits (165), Expect = 4e-12
 Identities = 30/86 (34%), Positives = 53/86 (61%)

Query: 174 MFTKDVQLFKEIEIYFSLEGERWQEDFISMEPKQDRVSEHARIIHVDLENRTAKHVMMKL 233
           MFTKDVQ+F   +++FS+ G  +  + +      D + +HAR + + L +R  K++ + L
Sbjct: 1   MFTKDVQVFVHAKVFFSIGGRYFSGEPVQFSYMPDTIMDHARDVTIKLHHRVGKYLKINL 60

Query: 234 YFQHEWILISEVTFKSAPTVVNASVE 259
           YF  +WI++SE++F S P + N + E
Sbjct: 61  YFAVKWIMLSEISFISVPAMGNFTDE 86


>X86685-1|CAA60383.1| 1283|Drosophila melanogaster neurexin IV
           protein.
          Length = 1283

 Score = 35.5 bits (78), Expect = 0.14
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 24  LIPGNVNTYTTKKTTLEAPFIASIVRVFPYAAHPRTACMRVELYGC 69
           +  GN +  +      E P IA  VR+ P   H R + MRVELYGC
Sbjct: 140 MFKGNSDGNSIHYNVFEVPIIAQWVRINPTRWHDRIS-MRVELYGC 184


>BT011472-1|AAR99130.1| 1284|Drosophila melanogaster RE18634p
           protein.
          Length = 1284

 Score = 35.5 bits (78), Expect = 0.14
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 24  LIPGNVNTYTTKKTTLEAPFIASIVRVFPYAAHPRTACMRVELYGC 69
           +  GN +  +      E P IA  VR+ P   H R + MRVELYGC
Sbjct: 141 MFKGNSDGNSIHYNVFEVPIIAQWVRINPTRWHDRIS-MRVELYGC 185


>AE014296-2104|AAF49951.1| 1284|Drosophila melanogaster CG6827-PA,
           isoform A protein.
          Length = 1284

 Score = 35.5 bits (78), Expect = 0.14
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 24  LIPGNVNTYTTKKTTLEAPFIASIVRVFPYAAHPRTACMRVELYGC 69
           +  GN +  +      E P IA  VR+ P   H R + MRVELYGC
Sbjct: 141 MFKGNSDGNSIHYNVFEVPIIAQWVRINPTRWHDRIS-MRVELYGC 185


>AE014296-2103|AAN12252.1| 1366|Drosophila melanogaster CG6827-PB,
           isoform B protein.
          Length = 1366

 Score = 35.5 bits (78), Expect = 0.14
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 24  LIPGNVNTYTTKKTTLEAPFIASIVRVFPYAAHPRTACMRVELYGC 69
           +  GN +  +      E P IA  VR+ P   H R + MRVELYGC
Sbjct: 223 MFKGNSDGNSIHYNVFEVPIIAQWVRINPTRWHDRIS-MRVELYGC 267


>AE014297-2733|AAF55719.1|  490|Drosophila melanogaster CG4770-PA
           protein.
          Length = 490

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 351 PIHMLRPAVVDEDYREPYNIWRETL 375
           PI ++RP++V   YREPY  W + +
Sbjct: 233 PIVIVRPSIVTAAYREPYPGWIDNI 257


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.322    0.136    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,890,665
Number of Sequences: 52641
Number of extensions: 788123
Number of successful extensions: 1760
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1748
Number of HSP's gapped (non-prelim): 8
length of query: 428
length of database: 24,830,863
effective HSP length: 87
effective length of query: 341
effective length of database: 20,251,096
effective search space: 6905623736
effective search space used: 6905623736
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 63 (29.5 bits)