GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000489-TA|BGIBMGA000489-PA|IPR002490|ATPase, V0/A0
complex, 116-kDa subunit
         (380 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...   321   2e-89
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...   293   4e-81
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            26   2.0  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   6.0  
AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    24   8.0  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score =  321 bits (789), Expect = 2e-89
 Identities = 161/355 (45%), Positives = 233/355 (65%), Gaps = 7/355 (1%)

Query: 1   MNPDVQAFQRNYITEVCRCAEMERKLRYVEAELLKDNIYVPD-SVQE-PKALQPNEMIAY 58
           +N DV AFQR +++EV RC EMERKLRYVE E+ KD++ +P+ SV + P+A  P E+I  
Sbjct: 40  LNADVNAFQRKFVSEVRRCDEMERKLRYVEGEVKKDSVQIPECSVDDWPRAPNPREIIDL 99

Query: 59  ENILEKWKNDITVMSENHTKLNKSYLELNEMLYVLNQIGPLLGDNDM--RRDSKFPNLRG 116
           E  LEK +N+I  +S+N   L  +YLEL E+ +VL +      + ++    D+   NL  
Sbjct: 100 EARLEKTENEILELSQNAVNLKSNYLELTELKHVLERTQSFFFEQEVIVSTDAAKSNLIA 159

Query: 117 ADILPG---GHLIVMPGVVRRSKSYHFEMMLWRVSRGNIYYRQATEDKILKDPFTGMEIR 173
            D       G L  + GV++R K   FE MLWR+SRGNI+ RQ   ++ L+DP TG EI 
Sbjct: 160 EDPTAAQSRGRLGFVAGVIQREKMPGFERMLWRISRGNIFLRQVELEEPLEDPATGNEIF 219

Query: 174 KVAFLAVCQGEELSTRMEKIFSGFRVNSYPCPESAKERLEMISQLETRMSDLEEILSKSK 233
           K  F+A  QGE+L  R++K+ +G+ V+ YPCP S  ER +M+  + TR+ DL  +L++++
Sbjct: 220 KTVFVAFFQGEQLKARIKKVCTGYHVSLYPCPSSGSERTDMVKGVCTRLEDLRMVLNQTQ 279

Query: 234 YIRCKTLRTVGKQWQNGIVQVKKAKAIYHTMNLFSLDITKKCLIGQCWIPERDLMRVQDI 293
             R   L +V K+  +  + VKK KAIYHT+NLF++D+TKKCLIG+CW+P  DL +VQ  
Sbjct: 280 DHRAIVLASVAKELFSWRIMVKKMKAIYHTLNLFNMDVTKKCLIGECWVPVPDLPKVQKA 339

Query: 294 LVECSETIGTNVPSFISKTTFSMSPPTFNRTNKYTHGFQVLINAYGDSMYRELNP 348
           L + S  +G+ +PSF++    + +PPT+NRTNK+T GFQ LI+AYG + YRE NP
Sbjct: 340 LSDGSAAVGSTIPSFLNVIDTNEAPPTYNRTNKFTRGFQNLIDAYGIASYREANP 394


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score =  293 bits (720), Expect = 4e-81
 Identities = 143/349 (40%), Positives = 217/349 (62%), Gaps = 3/349 (0%)

Query: 1   MNPDVQAFQRNYITEVCRCAEMERKLRYVEAELLKDNIYVPDSVQE-PKALQPNEMIAYE 59
           +N D+  FQR Y +E+ RC EMERK+ Y+  E++KD++ +PD  +  P+     E+I  E
Sbjct: 40  LNTDINMFQRKYTSEIRRCEEMERKIGYIRREIVKDSVAIPDMPEVIPRTPNSREIIDLE 99

Query: 60  NILEKWKNDITVMSENHTKLNKSYLELNEMLYVLNQIGPLLGDNDMRRDSKFPNLRGADI 119
             LEK +N+I  +SEN+  L ++++EL E+ +VL +      D    ++ +      A+ 
Sbjct: 100 AQLEKTENEIVELSENNNALLQNFMELTELKHVLEKTQVFFSDKSNVQNLEATGGEAAN- 158

Query: 120 LPGGHLIVMPGVVRRSKSYHFEMMLWRVSRGNIYYRQATEDKILKDPFTGMEIRKVAFLA 179
             G  L  + GV+ R +   FE MLWRVSRGNI+ RQAT ++ L DP TG  + K+ F+A
Sbjct: 159 -DGKPLGFVAGVISRERIIGFERMLWRVSRGNIFLRQATLEESLVDPKTGDSVHKIVFVA 217

Query: 180 VCQGEELSTRMEKIFSGFRVNSYPCPESAKERLEMISQLETRMSDLEEILSKSKYIRCKT 239
             QGE+L  R++K+ +G+  + YPCP    ER EM+  + TR+ DL+ +L +++  R + 
Sbjct: 218 FFQGEQLKARVKKVCAGYHASLYPCPNEYNEREEMLRGVRTRIEDLKMVLGQTQDQRQRV 277

Query: 240 LRTVGKQWQNGIVQVKKAKAIYHTMNLFSLDITKKCLIGQCWIPERDLMRVQDILVECSE 299
           L  V K+  N  + VKK KAIYHT+N+F++D++KKCL G+ W+P   L  V+  LV  S 
Sbjct: 278 LLNVAKEVPNWEIIVKKVKAIYHTLNMFNVDVSKKCLFGEAWVPTAGLQDVKTALVNGSA 337

Query: 300 TIGTNVPSFISKTTFSMSPPTFNRTNKYTHGFQVLINAYGDSMYRELNP 348
            +G+ VPSF++       PPT+N+TNK+T GFQ LI +YG + YRE NP
Sbjct: 338 AVGSAVPSFLNIIATDEDPPTYNKTNKFTRGFQNLIESYGIATYREANP 386


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 266 LFSLDITKKCLIGQCWIPERDLMRVQD--ILVECSETIGTNVPSFISKTTF 314
           L  LD T    I  C  P R  +R +D  ++++CS    T VP     TTF
Sbjct: 654 LCELD-TPSTAIRHCPAPCRCYIRPEDTGVIIDCSGQALTEVPELPRPTTF 703


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.2 bits (50), Expect = 6.0
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 207 SAKERLEMISQLETRMSDLEEILSKSKYIRCKTLR 241
           S KE  E  ++L  +  DL+E LSK +  + K  R
Sbjct: 641 SIKELQERCAELREQKRDLQEQLSKYQQTKMKVKR 675


>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 23.8 bits (49), Expect = 8.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 150 GNIYYRQATEDKILKDPFTGMEIRKV 175
           G IY+    ED I++    GM I+++
Sbjct: 89  GEIYWADTIEDVIMRSTPDGMRIKQI 114


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.135    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 397,788
Number of Sequences: 2123
Number of extensions: 15794
Number of successful extensions: 45
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 37
Number of HSP's gapped (non-prelim): 5
length of query: 380
length of database: 516,269
effective HSP length: 65
effective length of query: 315
effective length of database: 378,274
effective search space: 119156310
effective search space used: 119156310
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)