Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000488-TA|BGIBMGA000488-PA|undefined
(239 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.091
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 34 0.12
SB_7843| Best HMM Match : DUF740 (HMM E-Value=0.5) 32 0.48
SB_44364| Best HMM Match : Metallothionein (HMM E-Value=6.1) 31 0.64
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_45654| Best HMM Match : Extensin_2 (HMM E-Value=0.39) 31 0.85
SB_51494| Best HMM Match : Drf_FH1 (HMM E-Value=2.4) 31 1.1
SB_8972| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_58199| Best HMM Match : DUF1388 (HMM E-Value=0.0002) 30 1.5
SB_10182| Best HMM Match : Transformer (HMM E-Value=9.9) 30 1.5
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_50230| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_8478| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_8501| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_1953| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_29240| Best HMM Match : IncA (HMM E-Value=0.17) 29 3.4
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 29 3.4
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_55436| Best HMM Match : ig (HMM E-Value=1.2e-24) 28 6.0
SB_39455| Best HMM Match : PAN (HMM E-Value=1.5) 28 6.0
SB_55110| Best HMM Match : Squash (HMM E-Value=0.21) 28 6.0
SB_31663| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_27692| Best HMM Match : PAN (HMM E-Value=1.7) 28 6.0
SB_30968| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_23465| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.1e-07) 28 7.9
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_41869| Best HMM Match : Laminin_EGF (HMM E-Value=9.7e-23) 28 7.9
SB_21203| Best HMM Match : MFS_1 (HMM E-Value=0.0055) 28 7.9
SB_16967| Best HMM Match : Laminin_EGF (HMM E-Value=0) 28 7.9
>SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 34.3 bits (75), Expect = 0.091
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 141 PNDLTHHNPHAEAPKPKPELKLEIRNPDPLRRTNQPLNVKDLETRTSQSDKSQGATTPKT 200
P D +P PK K L EI+ +P + K RTS ++ + TTP
Sbjct: 454 PQDWNKEHPDLSTPK-KTALVAEIKKEAEEEEEKEPKSEKKKRKRTSDNESEKEETTPSK 512
Query: 201 ISTALSNRHPAEDTT 215
+ + ++ A++ T
Sbjct: 513 LKKSKKDKKKAKEAT 527
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 21 DGIRCGQLICQLDEYCSPETNRCAPCNVVCNKTH---HNYDSG 60
D CG+ C+ DE+ T+RC P + VC+ T+ NYD G
Sbjct: 118 DESTCGEGTCRPDEWHCIGTSRCIPLSRVCDGTNDCGDNYDEG 160
>SB_7843| Best HMM Match : DUF740 (HMM E-Value=0.5)
Length = 1362
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 157 KPELKLEIRNPDPLRRTNQ--PLNVKDLETRTSQSDKSQGATTPKTISTALSN 207
KP + RN P+R T+ P NVK + TR ++ +K + T T A+SN
Sbjct: 868 KPNGSVRDRNTSPIRFTSTTIPENVKLIRTRIAEREKLEFDTETNTAKHAVSN 920
>SB_44364| Best HMM Match : Metallothionein (HMM E-Value=6.1)
Length = 202
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 17 QITLDGIRCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNYDSGLCVKECQ 67
++ L I CG C ++ C PET C + C + N+ + CQ
Sbjct: 114 ELRLSRILCG---CSCEDECYPETCECILNGIGCQVDYGNFPCSCSISNCQ 161
>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1850
Score = 31.5 bits (68), Expect = 0.64
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 169 PLRRTNQPLNVKDLETRTSQSDKSQGATTPKTISTALSNRHPAEDTTLDF 218
PLR T+ PL ++++ ++ +++ P++ + R P E+ ++ F
Sbjct: 1620 PLRNTSAPLPIRNISVNFNREQQAKTFNVPESTTRGWGGREPQENVSVSF 1669
>SB_45654| Best HMM Match : Extensin_2 (HMM E-Value=0.39)
Length = 301
Score = 31.1 bits (67), Expect = 0.85
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 156 PKPELKLEIRNPDPLRRTNQPLNVKDLETRTSQSDKSQGATTPKTISTALSNRHPAEDTT 215
P +L + + P R + P++ +D T+ QG T P + T L H T
Sbjct: 95 PPTKLMYDTNDQGPTRPPSFPIDHEDPPTKLMYDTNDQGPTGPPSFPT-LEKDHEDPPTK 153
Query: 216 LDFSYDNMGMNVTPPGQP 233
L + ++ G + PP P
Sbjct: 154 LMYDANDQGPTI-PPSFP 170
>SB_51494| Best HMM Match : Drf_FH1 (HMM E-Value=2.4)
Length = 157
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 133 AKNRVKQYPNDLTHHNPHAEAPKPKPELKLEIRNPDPLRRTNQPLNV-KDLETRTSQSDK 191
A R+ Q P + P P+P+PE L++ P P T +P K R +++D+
Sbjct: 75 AMGRLAQLPG-ASRAAPPPPVPEPEPEPDLDLDLPVPPLETPRPKKTGKRQPMRKAKADR 133
Query: 192 SQGATTPKTISTALSNRHPAED 213
G + P + L++ P+ D
Sbjct: 134 PLGPSPPSALPD-LADFSPSRD 154
>SB_8972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 127 KQKFQPAKNRVKQYPNDLTHHNPHAEAPKPKPELKLEIRNPDPLRRTNQPLNV-KDLETR 185
K+ F+P KQ P D HN + P+ KL R D + NQP+N+ K E
Sbjct: 18 KKSFEPDS---KQRPRD---HNYKSTVPR---STKLSYRRMDVHGKDNQPVNIKKSFEPD 68
Query: 186 TSQ--SDKSQGATTPKTISTALSNRHPAEDT 214
++Q D + +T P+ + AL E T
Sbjct: 69 SNQRPGDHNYKSTVPRFTNCALEGLMYVERT 99
>SB_58199| Best HMM Match : DUF1388 (HMM E-Value=0.0002)
Length = 638
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 156 PKPELKLEIRNPDPLRRTN--QPLNVKDLETRTSQSDKSQGATTPKTISTA 204
P ++R P ++ T P VK + RTS + KS TP T+ +A
Sbjct: 213 PSTVKSAQVRTPSTVKSTQVRTPSTVKSTQVRTSSTVKSAQVRTPGTVKSA 263
>SB_10182| Best HMM Match : Transformer (HMM E-Value=9.9)
Length = 245
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 151 AEAPKPKPELKLEIRNPDPLRRTNQPLNVKDLETRTSQSDKSQGATTPKTISTALS---N 207
AE K +P+L +I P Q LN K E RT + ++GA+ P + + N
Sbjct: 149 AECEKKRPDL-WDIEIPPKQNAVWQNLNAKMSEKRTKSQNAAKGASPPSLVQRLAAEPDN 207
Query: 208 R---HPAEDTT-LDFSYDNM 223
+ P E +DF YD +
Sbjct: 208 KQTYRPVEPRKFVDFEYDEL 227
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 145 THHNPHAEAPKPKPELKLEIRNPDPLRRTNQPLNVKDLETRTSQSDKSQGATTPKTISTA 204
T+H+P K +LK+ D + TN+ + K+ TS S G +TP + +
Sbjct: 816 TNHHPAVHGESDKADLKINTETTDDNKMTNR-VKTKEESLGTSPRRSSIGGSTPTSKPSN 874
Query: 205 LSNRHPAEDTTLD 217
+N+ T D
Sbjct: 875 NNNQGTKASYTND 887
>SB_50230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 133 AKNRVKQYPNDLTHHNPHAEAPKPKPELKLEIRNPDPLRRTNQPLNV-KDLETRTSQSDK 191
A R+ Q P + P P+P+PE L++ P P T +P K R +++D+
Sbjct: 35 AMGRLAQLPG-ASRAAPPPPVPEPEPEPDLDLDLPVPPHETPRPKKTGKRQPMRKAKADR 93
Query: 192 SQGATTPKTI 201
G + P +
Sbjct: 94 PLGPSPPSAL 103
>SB_8478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 12 GVASAQITLDGIRCGQLICQLDEY-CSPETNRCAPCNVVCN---KTHHNYDSGLC 62
GV + LD +RCG +C L+ C + + + C K ++DSGLC
Sbjct: 251 GVKDCEHGLDELRCGSSVCPLNSLNCKDKHKQKSQSGEKCRFSFKGRCDFDSGLC 305
>SB_8501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 543
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/108 (18%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Query: 134 KNRVKQYPNDLTHHNPHAEAPKPKPELKLEIRNPDPLRRTNQPLNVKDLETRTSQSDKSQ 193
+NR + ++ +P A + KP +++ P + + ++ +++ +SQ
Sbjct: 144 RNRYRNETSNKPSPSPGARSGVAKPTRTPQVQAPPQRAAAQRATRNLNADSNANEASQSQ 203
Query: 194 GATTPKTI----STALSNRHPAEDTTLDFSYDNMGMNVTPPGQPAASH 237
G P T+ S++ ED +++S D+ ++V P + H
Sbjct: 204 GQKRPLTLPVKQEAQSSSKRKKEDPNMEWSSDS-ELSVASPAPSPSQH 250
>SB_1953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 153 APKPKPELKLEI-RNPDPLRRTNQPLNVKDLETRTSQSDKSQGATTPKTISTALSNRHPA 211
A + +P L++ + R LR N+ V DLE T+ S+G TT S + +HP
Sbjct: 64 AHEVRPSLRVAVTRGTSHLRGANE---VVDLEATTTHH-MSKGGTTANQFSDENTRKHPN 119
Query: 212 EDTTLD 217
+T D
Sbjct: 120 ATSTFD 125
>SB_29240| Best HMM Match : IncA (HMM E-Value=0.17)
Length = 555
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 12/62 (19%)
Query: 126 LKQKFQPAKNRVKQYPNDLTHHN----PHAE---APKPKPELKLEIRNPDPLRRTNQPLN 178
+K P N +K P H+ PH E A KPKPE K NP P +PLN
Sbjct: 478 MKLGLNPINNEIKTIPKHNMGHSKILLPHTESVTAHKPKPEAK---TNPKP--EVTKPLN 532
Query: 179 VK 180
+
Sbjct: 533 TQ 534
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 143 DLTHHNPHAEAPKPKPELKLEIRNPDPLRRTNQPLNVKDLETRTSQSDKSQGATTPKTIS 202
D +HH+ H + P P ++ P T N+ +L++ K Q +T I
Sbjct: 68 DNSHHHHHGKEELPPPPPLPDLTTPSNTTSTVLAANLSELDSLLEDLGKPQYPSTESPID 127
Query: 203 TALSN 207
LS+
Sbjct: 128 AMLSD 132
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 160 LKLEIRNPDPLRRTNQPLNVKDLETRTSQS--DKSQGATTPKTISTA-LSNRHPAEDTTL 216
L+++ R P R + + + L T+ S S D SQG TP+T ST S H T +
Sbjct: 295 LEIDKRIPRTKRHSAGSFDHRRLGTKMSDSTPDDSQGRNTPRTPSTPYYSTTHTTATTPV 354
Query: 217 D 217
D
Sbjct: 355 D 355
>SB_55436| Best HMM Match : ig (HMM E-Value=1.2e-24)
Length = 703
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 37 SPETNRCAPCNVVCNKTHHNY 57
S ETN +P N++CN H +Y
Sbjct: 640 SLETNTASPPNIICNSGHASY 660
>SB_39455| Best HMM Match : PAN (HMM E-Value=1.5)
Length = 109
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 39 ETNRCAPCNVVCNKTHHNYDSGLCVK--ECQGYLLDLRYMRR 78
+ NR A C V + H +Y VK EC YL ++ Y R
Sbjct: 49 KVNRVAQCAVKSMRDHKSYSFNFAVKPEECGTYLCEVLYTDR 90
>SB_55110| Best HMM Match : Squash (HMM E-Value=0.21)
Length = 573
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 29 ICQLDEYCSPETNRCAP 45
+C+ EYC P NRC P
Sbjct: 267 VCKSTEYCHPVLNRCLP 283
>SB_31663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 12/62 (19%)
Query: 126 LKQKFQPAKNRVKQYPNDLTHHN----PHAE---APKPKPELKLEIRNPDPLRRTNQPLN 178
+K P N +K P H+ PH E A KPKPE K NP P +PLN
Sbjct: 607 MKLGLNPINNEIKTIPKHNMGHSKILLPHTESVTAHKPKPEAK---TNPKP--DVTKPLN 661
Query: 179 VK 180
+
Sbjct: 662 TQ 663
>SB_27692| Best HMM Match : PAN (HMM E-Value=1.7)
Length = 109
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 39 ETNRCAPCNVVCNKTHHNYDSGLCVK--ECQGYLLDLRYMRR 78
+ NR A C V + H +Y VK EC YL ++ Y R
Sbjct: 49 KVNRVAQCAVKSMRDHKSYSFNFAVKPEECGTYLCEVLYTDR 90
>SB_30968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Query: 37 SPETNRCAPCNVVCNKTHHN 56
SP T PC C K HHN
Sbjct: 64 SPFTKHKRPCTAPCRKAHHN 83
>SB_23465| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.1e-07)
Length = 1118
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 167 PDPLRRTNQPLNVKDLETRTSQSDKSQGATTPKTISTAL 205
PD + +NQP L S +KS TP+T S AL
Sbjct: 122 PDSMDNSNQPSVHPKLPISESSKEKSTPPNTPQTSSKAL 160
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/62 (27%), Positives = 21/62 (33%)
Query: 149 PHAEAPKPKPELKLEIRNPDPLRRTNQPLNVKDLETRTSQSDKSQGATTPKTISTALSNR 208
P P P+P L + P + T P T TSQS S S L +
Sbjct: 152 PQPFTPPPRPFDDLRSLSSTPRKSTTSPQFTPFTHTTTSQSTSSYSLQATNAYSAMLEDE 211
Query: 209 HP 210
P
Sbjct: 212 QP 213
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/70 (25%), Positives = 28/70 (40%)
Query: 167 PDPLRRTNQPLNVKDLETRTSQSDKSQGATTPKTISTALSNRHPAEDTTLDFSYDNMGMN 226
P + QPL+V T + S G +TP + ++ P LD G +
Sbjct: 1631 PSTTHQEMQPLSVPPRSTTPTTPLSSSGPSTPISTVAPMTPLTPTSPRGLDMLAMQPGYD 1690
Query: 227 VTPPGQPAAS 236
+P + AAS
Sbjct: 1691 ASPASKNAAS 1700
>SB_41869| Best HMM Match : Laminin_EGF (HMM E-Value=9.7e-23)
Length = 198
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 24 RCGQLICQ-LDEYCSPETNRCAPCNVVCNKTHHNYDSGLCVKECQG 68
RC C +C PET C C + H Y LC QG
Sbjct: 14 RCVLCSCNDRSRFCHPETGVCTDCKI----GTHGYRCELCTNNVQG 55
>SB_21203| Best HMM Match : MFS_1 (HMM E-Value=0.0055)
Length = 554
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Query: 151 AEAPKPKPELKLEIRNPDPLRRTNQPLNVKDLETRTSQSDKSQGATTP---KTISTALSN 207
A+ P P L P + P+ L T T + ++ A TP ++ T
Sbjct: 450 ADTPMLTPSLPTVTEEESPAESADTPMLTPSLLTVTEEESPAESADTPMLTPSLPTVTEE 509
Query: 208 RHPAEDTT 215
PAE T
Sbjct: 510 ESPAESDT 517
>SB_16967| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1706
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 24 RCGQLICQ-LDEYCSPETNRCAPCNVVCNKTHHNYDSGLCVKECQG 68
RC C +C PET C C + H Y LC QG
Sbjct: 1004 RCVLCSCNDRSRFCHPETGVCTDCKI----GTHGYRCELCTNNVQG 1045
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.132 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,774,092
Number of Sequences: 59808
Number of extensions: 379408
Number of successful extensions: 1200
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1172
Number of HSP's gapped (non-prelim): 47
length of query: 239
length of database: 16,821,457
effective HSP length: 80
effective length of query: 159
effective length of database: 12,036,817
effective search space: 1913853903
effective search space used: 1913853903
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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