Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000487-TA|BGIBMGA000487-PA|undefined
         (99 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    20   5.5  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    20   5.5  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    20   5.5  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory
          receptor candidate 30 protein.
          Length = 394

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 6/20 (30%), Positives = 14/20 (70%)

Query: 8  DKQKISNLEQPSLVNEQLGQ 27
          +K ++S  +  +L+N+ LG+
Sbjct: 11 EKSQLSTADTANLINKSLGK 30


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory
          receptor candidate 29 protein.
          Length = 429

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 6/20 (30%), Positives = 14/20 (70%)

Query: 8  DKQKISNLEQPSLVNEQLGQ 27
          +K ++S  +  +L+N+ LG+
Sbjct: 11 EKSQLSTADTANLINKSLGK 30


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory
          receptor candidate 7 protein.
          Length = 429

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 6/20 (30%), Positives = 14/20 (70%)

Query: 8  DKQKISNLEQPSLVNEQLGQ 27
          +K ++S  +  +L+N+ LG+
Sbjct: 11 EKSQLSTADTANLINKSLGK 30


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.306    0.123    0.304 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,096
Number of Sequences: 317
Number of extensions: 243
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 99
length of database: 114,650
effective HSP length: 48
effective length of query: 51
effective length of database: 99,434
effective search space:  5071134
effective search space used:  5071134
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.3 bits)
S2: 37 (19.0 bits)