GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000487-TA|BGIBMGA000487-PA|undefined
         (99 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138902-1|ABA86508.1| 1333|Drosophila melanogaster CG6890 protein.    27   3.0  
AY118551-1|AAM49920.1| 1346|Drosophila melanogaster LD33590p pro...    27   3.0  
AF247764-1|AAF86224.1| 1346|Drosophila melanogaster Toll-8 protein.    27   3.0  
AF204158-1|AAF18983.1| 1346|Drosophila melanogaster cell surface...    27   3.0  
AE014296-2494|AAF49650.1| 1346|Drosophila melanogaster CG6890-PA...    27   3.0  

>DQ138902-1|ABA86508.1| 1333|Drosophila melanogaster CG6890 protein.
          Length = 1333

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 2/40 (5%)

Query: 4   VLSSDKQKISNLEQPSLVN-EQLGQLYL-DLQLEGVAARL 41
           VLS D  +IS ++Q SLVN  QL  L+L D +L+ V   L
Sbjct: 401 VLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKLQAVPEAL 440


>AY118551-1|AAM49920.1| 1346|Drosophila melanogaster LD33590p
           protein.
          Length = 1346

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 2/40 (5%)

Query: 4   VLSSDKQKISNLEQPSLVN-EQLGQLYL-DLQLEGVAARL 41
           VLS D  +IS ++Q SLVN  QL  L+L D +L+ V   L
Sbjct: 408 VLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKLQAVPEAL 447


>AF247764-1|AAF86224.1| 1346|Drosophila melanogaster Toll-8 protein.
          Length = 1346

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 2/40 (5%)

Query: 4   VLSSDKQKISNLEQPSLVN-EQLGQLYL-DLQLEGVAARL 41
           VLS D  +IS ++Q SLVN  QL  L+L D +L+ V   L
Sbjct: 408 VLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKLQAVPEAL 447


>AF204158-1|AAF18983.1| 1346|Drosophila melanogaster cell surface
           receptor TOLLO protein.
          Length = 1346

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 2/40 (5%)

Query: 4   VLSSDKQKISNLEQPSLVN-EQLGQLYL-DLQLEGVAARL 41
           VLS D  +IS ++Q SLVN  QL  L+L D +L+ V   L
Sbjct: 408 VLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKLQAVPEAL 447


>AE014296-2494|AAF49650.1| 1346|Drosophila melanogaster CG6890-PA
           protein.
          Length = 1346

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 2/40 (5%)

Query: 4   VLSSDKQKISNLEQPSLVN-EQLGQLYL-DLQLEGVAARL 41
           VLS D  +IS ++Q SLVN  QL  L+L D +L+ V   L
Sbjct: 408 VLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKLQAVPEAL 447


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.306    0.123    0.304 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,511,661
Number of Sequences: 52641
Number of extensions: 52026
Number of successful extensions: 72
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 72
Number of HSP's gapped (non-prelim): 5
length of query: 99
length of database: 24,830,863
effective HSP length: 73
effective length of query: 26
effective length of database: 20,988,070
effective search space: 545689820
effective search space used: 545689820
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
S2: 54 (25.8 bits)