Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000486-TA|BGIBMGA000486-PA|IPR013767|PAS fold,
IPR013655|PAS fold-3, IPR000014|PAS
(699 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 40 0.004
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 39 0.013
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 38 0.023
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 36 0.12
At2g22795.1 68415.m02704 expressed protein 36 0.12
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 36 0.12
At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein ... 36 0.12
At4g16280.3 68417.m02471 flowering time control protein / FCA ga... 34 0.28
At4g16280.2 68417.m02470 flowering time control protein / FCA ga... 34 0.28
At4g16280.1 68417.m02469 flowering time control protein / FCA ga... 34 0.28
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 34 0.37
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 33 0.49
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 33 0.64
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 33 0.64
At5g51300.2 68418.m06360 splicing factor-related contains simila... 33 0.85
At5g51300.1 68418.m06359 splicing factor-related contains simila... 33 0.85
At4g16140.1 68417.m02445 proline-rich family protein contains pr... 33 0.85
At4g34150.1 68417.m04846 C2 domain-containing protein similar to... 32 1.1
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 32 1.1
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 32 1.1
At2g46180.1 68415.m05742 intracellular protein transport protein... 32 1.1
At3g52460.1 68416.m05769 hydroxyproline-rich glycoprotein family... 32 1.5
At3g02010.1 68416.m00162 pentatricopeptide (PPR) repeat-containi... 32 1.5
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 32 1.5
At3g24550.1 68416.m03083 protein kinase family protein contains ... 31 2.0
At2g40820.1 68415.m05038 proline-rich family protein contains pr... 31 2.0
At1g21310.1 68414.m02662 proline-rich extensin-like family prote... 31 2.0
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 31 2.6
At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family... 31 2.6
At5g46780.2 68418.m05763 VQ motif-containing protein contains PF... 31 3.4
At5g46780.1 68418.m05762 VQ motif-containing protein contains PF... 31 3.4
At3g10180.1 68416.m01219 kinesin motor protein-related similar t... 31 3.4
At1g23050.1 68414.m02880 hydroxyproline-rich glycoprotein family... 31 3.4
At1g21810.1 68414.m02729 expressed protein 31 3.4
At4g33760.1 68417.m04793 tRNA synthetase class II (D, K and N) f... 30 4.5
At3g62680.1 68416.m07041 proline-rich family protein contains pr... 30 4.5
At4g17720.1 68417.m02646 RNA recognition motif (RRM)-containing ... 30 6.0
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 30 6.0
At1g59660.1 68414.m06710 nucleoporin family protein contains Pfa... 30 6.0
At1g37020.1 68414.m04616 Ulp1 protease family protein 30 6.0
At3g10650.1 68416.m01281 expressed protein 29 7.9
At3g01560.1 68416.m00086 proline-rich family protein contains pr... 29 7.9
At2g46840.1 68415.m05845 expressed protein ; expression supporte... 29 7.9
At2g24690.1 68415.m02948 transcriptional factor B3 family protei... 29 7.9
At1g22610.1 68414.m02823 C2 domain-containing protein contains I... 29 7.9
At1g07360.1 68414.m00785 zinc finger (CCCH-type) family protein ... 29 7.9
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 40.3 bits (90), Expect = 0.004
Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 12/99 (12%)
Query: 590 SPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQP 649
SP PP P+YYTP+ P P + Q+ P Y PP V P P
Sbjct: 646 SPPPP-----PVYYTPVIQSPPPPPVYYSPVTQSPPPPPPVYYPP----VTQSPP--PSP 694
Query: 650 MYSSPFVYSPMNPHTNY-PMQQTTPQPNAQFTPTNTMNP 687
+Y P SP P Y P+ Q+ P P+ + P +P
Sbjct: 695 VYYPPVTQSPPPPPVYYLPVTQSPPPPSPVYYPPVAKSP 733
Score = 39.9 bits (89), Expect = 0.006
Identities = 39/157 (24%), Positives = 57/157 (36%), Gaps = 15/157 (9%)
Query: 532 PSPRASRPRQTTSAAPVQXXXXXXXXXXXXXWPPSTNAAGNMNTFILGVG--MAPQMSLI 589
P P +S+ T A P PPS+ + + M+P +
Sbjct: 441 PPPPSSKMSPTFRATPPPPSSKMSPSFRATPPPPSSKMSPSFRATPPPPSSKMSPSVKAY 500
Query: 590 SPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQC---VLYGQPIY 646
P PP P Y P +P P +SE + + P +PPP +Y P
Sbjct: 501 PPPPP-----PPEYEP----SPPPPSSEMSPSVRAYPPPPPLSPPPPSPPPPYIYSSPPP 551
Query: 647 GQPMYSSPFVYSPMNPHTNY-PMQQTTPQPNAQFTPT 682
P P++YS P N P Q+ P P + TP+
Sbjct: 552 PSPSPPPPYIYSSPPPVVNCPPTTQSPPPPKYEQTPS 588
Score = 35.5 bits (78), Expect = 0.12
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 15/96 (15%)
Query: 590 SPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQP 649
SP PP P+YY P+ P PS ++ P +PPP V Y P
Sbjct: 703 SPPPP-----PVYYLPVTQSPPPPSP--------VYYPPVAKSPPPPSPVYYPPVTQSPP 749
Query: 650 MYSSPFVY-SPMNPHTNYPMQQTTPQP-NAQFTPTN 683
S+P Y P +P+ + P + +P P +P+N
Sbjct: 750 PPSTPVEYHPPASPNQSPPPEYQSPPPKGCNDSPSN 785
Score = 30.7 bits (66), Expect = 3.4
Identities = 24/101 (23%), Positives = 35/101 (34%), Gaps = 3/101 (2%)
Query: 590 SPVPPMAGMLPLY-YTPMATMAPVPSTSEAANHQNLHN--NPQQYAPPPMQCVLYGQPIY 646
SP PP P Y Y+ + P T+++ +P++Y P P
Sbjct: 548 SPPPPSPSPPPPYIYSSPPPVVNCPPTTQSPPPPKYEQTPSPREYYPSPSPPYYQYTSSP 607
Query: 647 GQPMYSSPFVYSPMNPHTNYPMQQTTPQPNAQFTPTNTMNP 687
P Y + P P T Y +Q P P + P P
Sbjct: 608 PPPTYYATQSPPPPPPPTYYAVQSPPPPPPVYYPPVTASPP 648
Score = 30.3 bits (65), Expect = 4.5
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 633 PPPMQCVLYGQPIYGQPMYSSPFVYSPMNPHTNY-PMQQTTPQPNAQFTPTNTMNP 687
PPP P P+Y P SP P Y P+ Q+ P P ++P P
Sbjct: 621 PPPPTYYAVQSPPPPPPVYYPPVTASPPPPPVYYTPVIQSPPPPPVYYSPVTQSPP 676
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 38.7 bits (86), Expect = 0.013
Identities = 32/106 (30%), Positives = 42/106 (39%), Gaps = 11/106 (10%)
Query: 584 PQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQ-QYAPPPMQCVLYG 642
P + SP PP P P + AP P H+ P Q++PPP + Y
Sbjct: 505 PPPPVYSPPPPPVYSSP---PPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPPPEPYYYS 561
Query: 643 QPIYGQPMYSSPFVYSPMNPHTN----YPMQQTTPQPNAQFTPTNT 684
P P +SSP +SP PH+ YP P P +P T
Sbjct: 562 SP---PPPHSSPPPHSPPPPHSPPPPIYPYLSPPPPPTPVSSPPPT 604
Score = 29.5 bits (63), Expect = 7.9
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 13/104 (12%)
Query: 572 NMNTFILGVGMAPQMSLISPVPPMA-----GMLPLYYTPMATMAPVPSTSEAANHQNLHN 626
N +F G ++P+ +++P+PP + P++ TP +P P + +
Sbjct: 382 NCGSFSCGRSVSPRPPVVTPLPPPSLPSPPPPAPIFSTPPTLTSPPPPSPPPPVYSPPPP 441
Query: 627 NPQQ---YAPPPMQCVLYGQPIYGQPMYSSPF-----VYSPMNP 662
P Y+PPP P+Y P P VYSP P
Sbjct: 442 PPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPP 485
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 37.9 bits (84), Expect = 0.023
Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 9/98 (9%)
Query: 589 ISPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQY------APPPMQCVLYG 642
++P PP P+YY P+ P PS + P +Y +PPP + G
Sbjct: 638 VTPSPPPPS--PVYYPPVTPSPPPPSPVYYPSETQSPPPPTEYYYSPSQSPPPTKACKEG 695
Query: 643 QPIYGQPMYSSPFVYS-PMNPHTNYPMQQTTPQPNAQF 679
P P Y P YS +P P P P+ +
Sbjct: 696 HPPQATPSYEPPPEYSYSSSPPPPSPTSYFPPMPSVSY 733
Score = 36.7 bits (81), Expect = 0.052
Identities = 31/105 (29%), Positives = 41/105 (39%), Gaps = 20/105 (19%)
Query: 590 SPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQP 649
SP PP P+YY P+ P PS PQ PP LY P+ P
Sbjct: 581 SPPPPS----PVYYPPVTYSPPPPSPVYY---------PQVTPSPPPPSPLYYPPVTPSP 627
Query: 650 MYSSPFVYSPMNPH------TNY-PMQQTTPQPNAQFTPTNTMNP 687
SP Y P+ P Y P+ + P P+ + P+ T +P
Sbjct: 628 PPPSPVYYPPVTPSPPPPSPVYYPPVTPSPPPPSPVYYPSETQSP 672
Score = 32.7 bits (71), Expect = 0.85
Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 17/94 (18%)
Query: 590 SPVPPMAGMLP----LYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPI 645
SP PP P +YY P+ P PS ++ P +PPP V Y P+
Sbjct: 528 SPPPPCPESSPPPPVVYYAPVTQSPPPPSP--------VYYPPVTQSPPPPSPVYY-PPV 578
Query: 646 YGQPMYSSPFVYSPM--NPHTNYPM--QQTTPQP 675
P SP Y P+ +P P+ Q TP P
Sbjct: 579 TNSPPPPSPVYYPPVTYSPPPPSPVYYPQVTPSP 612
Score = 29.9 bits (64), Expect = 6.0
Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 7/110 (6%)
Query: 582 MAPQMSLISPVPP-MAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVL 640
M+P + SP PP + M P P PS + + P Y+ PP +
Sbjct: 432 MSPSVRAYSPPPPPYSKMSPSVRAYPPPPPPSPSPPPPYVYSS-PPPPYVYSSPPPPPYV 490
Query: 641 YGQPIYGQPMYSS---PFVYSPMNPHTNYPMQQTTPQPNAQFTPTNTMNP 687
Y P +YSS P+VYS +P Y P P + P +P
Sbjct: 491 YSSPPPPPYVYSSPPPPYVYS--SPPPPYVYSSPPPPPPSPPPPCPESSP 538
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 35.5 bits (78), Expect = 0.12
Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Query: 584 PQMSLISPVPPMAGMLPLYYTPMATM-APVPSTSEAANHQNLHNNPQQYAPPPMQCVLYG 642
P + SP PP+ P Y+P + +P P +H+ P PP +Y
Sbjct: 561 PPPPVHSPPPPVFSPPPPVYSPPPPVHSPPPPVHSPPPPAPVHSPPPPVHSPPPPPPVYS 620
Query: 643 --QPIYG-QPMYSSPFVYS--PMNPHTNYPMQQTTP 673
P++ P S P VYS P P N P Q+ P
Sbjct: 621 PPPPVFSPPPSQSPPVVYSPPPRPPKINSPPVQSPP 656
Score = 33.1 bits (72), Expect = 0.64
Identities = 22/91 (24%), Positives = 35/91 (38%)
Query: 591 PVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPM 650
P P+ P+ TP+ +PVP+T L + +P P + V QP P
Sbjct: 443 PTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLATPVDKPSPVPSRPVQKPQPPKESPQ 502
Query: 651 YSSPFVYSPMNPHTNYPMQQTTPQPNAQFTP 681
P+ SP+ + P P ++P
Sbjct: 503 PDDPYDQSPVTKRRSPPPAPVNSPPPPVYSP 533
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 35.5 bits (78), Expect = 0.12
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 446 KHNDEMEKELINMHRESRSN--SKGERDKTSNETRQKKKEHLARCKASFHPTATSTTPVD 503
K N+++EKE + ES+ N E++++S++ K+KE+ K P + +
Sbjct: 542 KENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKEN 601
Query: 504 KEVYKKPHGVKRASKHIETET 524
+++ K+ + +K ETET
Sbjct: 602 EKIEKEESASQEETKEKETET 622
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 35.5 bits (78), Expect = 0.12
Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 12/117 (10%)
Query: 584 PQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQ 643
PQ + SP PP P+Y P +P P + ++++ P A PP
Sbjct: 536 PQPPMPSPSPPS----PIYSPPPPVHSPPPPVYSSPPPPHVYSPPPPVASPPPPSP--PP 589
Query: 644 PIYG---QPMYS-SPFVYSPMNPHTNY--PMQQTTPQPNAQFTPTNTMNPLCLANSN 694
P++ P++S P V+SP P Y P +P P P T +P N+N
Sbjct: 590 PVHSPPPPPVFSPPPPVFSPPPPSPVYSPPPPSHSPPPPVYSPPPPTFSPPPTHNTN 646
>At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein
contains Pfam profile: PF01363 FYVE zinc finger
Length = 601
Score = 35.5 bits (78), Expect = 0.12
Identities = 41/161 (25%), Positives = 54/161 (33%), Gaps = 21/161 (13%)
Query: 532 PSPRASRPRQTTSAAPVQXXXXXXXXXXXXXWPPSTNAAGNMNTFILGVGMAPQMSLISP 591
P+P S P T A P PP T G+ + P
Sbjct: 26 PNPNPSPPAPATVAGPTDLTRNTYASA-----PPFTGGYGSADYSNYSQNYTPYGQNSEH 80
Query: 592 VPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPP---PMQCVLYGQ----P 644
VPP A P + +P P+TS N + N P PP P YG
Sbjct: 81 VPPSA---PSFTSPSQPPPSPPATSLNPNSYSTFNQPPP--PPTIHPQPLSSYGSFDSTA 135
Query: 645 IYGQP----MYSSPFVYSPMNPHTNYPMQQTTPQPNAQFTP 681
Y QP MY SP+ + +++ P + P PN P
Sbjct: 136 PYQQPTSQHMYYSPYDQHQTSGYSSAPPPSSAPAPNPNPAP 176
>At4g16280.3 68417.m02471 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 533
Score = 34.3 bits (75), Expect = 0.28
Identities = 38/151 (25%), Positives = 58/151 (38%), Gaps = 18/151 (11%)
Query: 563 WPPST--NAAGNMNTFILGVG--MAPQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEA 618
W P+T N NT I G G P+ + G L Y P PVP S +
Sbjct: 338 WRPATSRNVGPPSNTGIRGAGSDFPPKPGQATLPSNQGGPLGGYGVPPLNPLPVPGVSSS 397
Query: 619 ANHQNLHNNPQQYAPP---PMQCVLYGQPIYGQPMYS---------SPFVYSPMNPHTNY 666
A Q + Q+ P P+ G P+ +P + +P+ YS P +
Sbjct: 398 ATLQQQNRAAGQHITPLKKPLHSP-QGLPLPLRPQTNFPGAQAPLQNPYAYSSQLPTSQL 456
Query: 667 PMQQTTPQPNAQFTPTN-TMNPLCLANSNYE 696
P QQ + A TP N + P ++++ +
Sbjct: 457 PPQQNISRATAPQTPLNINLRPTTVSSATVQ 487
>At4g16280.2 68417.m02470 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 747
Score = 34.3 bits (75), Expect = 0.28
Identities = 38/151 (25%), Positives = 58/151 (38%), Gaps = 18/151 (11%)
Query: 563 WPPST--NAAGNMNTFILGVG--MAPQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEA 618
W P+T N NT I G G P+ + G L Y P PVP S +
Sbjct: 338 WRPATSRNVGPPSNTGIRGAGSDFPPKPGQATLPSNQGGPLGGYGVPPLNPLPVPGVSSS 397
Query: 619 ANHQNLHNNPQQYAPP---PMQCVLYGQPIYGQPMYS---------SPFVYSPMNPHTNY 666
A Q + Q+ P P+ G P+ +P + +P+ YS P +
Sbjct: 398 ATLQQQNRAAGQHITPLKKPLHSP-QGLPLPLRPQTNFPGAQAPLQNPYAYSSQLPTSQL 456
Query: 667 PMQQTTPQPNAQFTPTN-TMNPLCLANSNYE 696
P QQ + A TP N + P ++++ +
Sbjct: 457 PPQQNISRATAPQTPLNINLRPTTVSSATVQ 487
>At4g16280.1 68417.m02469 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 505
Score = 34.3 bits (75), Expect = 0.28
Identities = 38/151 (25%), Positives = 58/151 (38%), Gaps = 18/151 (11%)
Query: 563 WPPST--NAAGNMNTFILGVG--MAPQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEA 618
W P+T N NT I G G P+ + G L Y P PVP S +
Sbjct: 96 WRPATSRNVGPPSNTGIRGAGSDFPPKPGQATLPSNQGGPLGGYGVPPLNPLPVPGVSSS 155
Query: 619 ANHQNLHNNPQQYAPP---PMQCVLYGQPIYGQPMYS---------SPFVYSPMNPHTNY 666
A Q + Q+ P P+ G P+ +P + +P+ YS P +
Sbjct: 156 ATLQQQNRAAGQHITPLKKPLHSP-QGLPLPLRPQTNFPGAQAPLQNPYAYSSQLPTSQL 214
Query: 667 PMQQTTPQPNAQFTPTN-TMNPLCLANSNYE 696
P QQ + A TP N + P ++++ +
Sbjct: 215 PPQQNISRATAPQTPLNINLRPTTVSSATVQ 245
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 33.9 bits (74), Expect = 0.37
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 8/102 (7%)
Query: 584 PQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQ--YAPPPMQCVLY 641
P S +P PP + P P T+ P P S + N + +P + Y P P+ Y
Sbjct: 169 PPESSSNPNPPESSSNP---NPPITI-PYPPESSSPNPPEIVPSPPESGYTPGPVLGPPY 224
Query: 642 GQPIYGQPMYSSPFVYSPMNPHTNYPMQQTTPQPNAQFTPTN 683
+P P S P S P YP P P+ TPT+
Sbjct: 225 SEPGPSTPTGSIPSPSSGFLPPIVYPPPMAPPSPSV--TPTS 264
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 33.5 bits (73), Expect = 0.49
Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
Query: 593 PPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLY--GQPIYGQPM 650
PP P P M P P+ S +H P PP++ ++ PIY P+
Sbjct: 141 PPTPSYSPPVKPPPVQMPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPVHKPPTPIYSPPI 200
Query: 651 YSSPFVYSPMNPHTNYPMQQTTPQPNAQFTPTNTMNP 687
P V+ P P + P++ P PT T +P
Sbjct: 201 KPPP-VHKPPTPIYSPPIK----PPPVHKPPTPTYSP 232
Score = 30.3 bits (65), Expect = 4.5
Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 8/91 (8%)
Query: 600 PLYYTPMATMAPVPSTSEAANHQNLHNNPQQ-YAPP--PMQCVLYGQPIYGQPMYSSPFV 656
P Y P P P+ S + P Y+PP P P Y P+Y P +
Sbjct: 80 PPIYPPPIQKPPTPTYSPPIYPPPIQKPPTPTYSPPIYPPPIQKPPTPTYSPPIYPPP-I 138
Query: 657 YSPMNPHTNYPMQQTTPQPNAQFTPTNTMNP 687
P P + P++ P Q PT T +P
Sbjct: 139 QKPPTPSYSPPVKP----PPVQMPPTPTYSP 165
Score = 29.9 bits (64), Expect = 6.0
Identities = 23/95 (24%), Positives = 30/95 (31%), Gaps = 2/95 (2%)
Query: 593 PPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPMYS 652
PP P P P P+ S +H P PP++ +P P YS
Sbjct: 595 PPTPTYSPPIKPPPVHKPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPPVHKP--PTPTYS 652
Query: 653 SPFVYSPMNPHTNYPMQQTTPQPNAQFTPTNTMNP 687
P P+ P Q PT T +P
Sbjct: 653 PPIKPPPVQKPPTPTYSPPVKPPPVQLPPTPTYSP 687
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 33.1 bits (72), Expect = 0.64
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 13/100 (13%)
Query: 583 APQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQ-YAPPPMQCVLY 641
+P + SP PPM P Y+P + P + +H+ P ++PPP
Sbjct: 655 SPPPPVFSPPPPMHSPPPPVYSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPP------ 708
Query: 642 GQPIYGQPMYSSPFVYSPMNPHTNYPMQQTTPQPNAQFTP 681
P++ P P V+SP P + P +P P F+P
Sbjct: 709 --PVHSPP----PPVHSPPPPVHSPPPPVQSPPPPPVFSP 742
Score = 32.3 bits (70), Expect = 1.1
Identities = 28/109 (25%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 584 PQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQ 643
P + SP PP P+Y P + P + +H+ P PP
Sbjct: 735 PPPPVFSPPPPA----PIYSPPPPPVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPP 790
Query: 644 PIYGQP--MYSSPF---VYSPMNPHTNYPMQQTTPQPNAQFTPTNTMNP 687
P++ P ++S P +YSP P + P + TP P A N P
Sbjct: 791 PVHSPPPPVHSPPPPSPIYSPPPPVFSPPPKPVTPLPPATSPMANAPTP 839
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 33.1 bits (72), Expect = 0.64
Identities = 29/107 (27%), Positives = 37/107 (34%), Gaps = 6/107 (5%)
Query: 579 GVGMAPQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQC 638
G MA S S PP G P ++ P+P A + L + PP Q
Sbjct: 268 GQYMAGNASFPSSTPPPPGQYMAGNAPFSSSTPLPPGQYPAVNAQLSTSAPSVPLPPGQY 327
Query: 639 VLYGQPI--YGQPMYSSPFVYSPMNPHTNYPMQQTTPQPNAQFTPTN 683
P QP+ P Y P N + +TP QFT N
Sbjct: 328 TAVNAPFSTSTQPVSLPPGQYMP----GNAALSASTPLTPGQFTTAN 370
>At5g51300.2 68418.m06360 splicing factor-related contains
similarity to SF1 protein [Drosophila melanogaster]
GI:6687400
Length = 804
Score = 32.7 bits (71), Expect = 0.85
Identities = 35/161 (21%), Positives = 49/161 (30%), Gaps = 8/161 (4%)
Query: 539 PRQTTSAAPVQXXXXXXXXXXXXXWPPSTNAAGNMNTFILGVGMAPQMSLISPVPPMAGM 598
P T A P +PP A T + + P P
Sbjct: 644 PPHVTQAPPPGTTQNPSSSEPQQSFPPGVQADSGAATSSIPPNVYGSSVTAMPGQPPYMS 703
Query: 599 LPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPMYSSPFVYS 658
P YY + P S + QN+ N P P P + Q + ++P+ +
Sbjct: 704 YPSYYNAVPPPTPPAPASSTDHSQNMGNMPWANNPS------VSTPDHSQGLVNAPWAPN 757
Query: 659 PMNPHTNYPMQQTTPQPNAQFTPTN--TMNPLCLANSNYEE 697
P P T Q P A P NP + S YE+
Sbjct: 758 PPMPPTVGYSQSMGNVPWAPKPPVQPPAENPSSVGESEYEK 798
Score = 29.9 bits (64), Expect = 6.0
Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 10/102 (9%)
Query: 593 PPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPMYS 652
PP A Y T + APVP ++ +P PPP P++GQ M
Sbjct: 584 PPGAYPSQQYATGGYSTAPVPWGPPVPSY-----SPYALPPPPPGSY---HPVHGQHMPP 635
Query: 653 SPFVYSPMNPH-TNYPMQQTTPQPNAQFTPTNTMNPLCLANS 693
Y P PH T P TT P++ P + P A+S
Sbjct: 636 YGMQYPPPPPHVTQAPPPGTTQNPSSS-EPQQSFPPGVQADS 676
>At5g51300.1 68418.m06359 splicing factor-related contains
similarity to SF1 protein [Drosophila melanogaster]
GI:6687400
Length = 804
Score = 32.7 bits (71), Expect = 0.85
Identities = 35/161 (21%), Positives = 49/161 (30%), Gaps = 8/161 (4%)
Query: 539 PRQTTSAAPVQXXXXXXXXXXXXXWPPSTNAAGNMNTFILGVGMAPQMSLISPVPPMAGM 598
P T A P +PP A T + + P P
Sbjct: 644 PPHVTQAPPPGTTQNPSSSEPQQSFPPGVQADSGAATSSIPPNVYGSSVTAMPGQPPYMS 703
Query: 599 LPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPMYSSPFVYS 658
P YY + P S + QN+ N P P P + Q + ++P+ +
Sbjct: 704 YPSYYNAVPPPTPPAPASSTDHSQNMGNMPWANNPS------VSTPDHSQGLVNAPWAPN 757
Query: 659 PMNPHTNYPMQQTTPQPNAQFTPTN--TMNPLCLANSNYEE 697
P P T Q P A P NP + S YE+
Sbjct: 758 PPMPPTVGYSQSMGNVPWAPKPPVQPPAENPSSVGESEYEK 798
Score = 29.9 bits (64), Expect = 6.0
Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 10/102 (9%)
Query: 593 PPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPMYS 652
PP A Y T + APVP ++ +P PPP P++GQ M
Sbjct: 584 PPGAYPSQQYATGGYSTAPVPWGPPVPSY-----SPYALPPPPPGSY---HPVHGQHMPP 635
Query: 653 SPFVYSPMNPH-TNYPMQQTTPQPNAQFTPTNTMNPLCLANS 693
Y P PH T P TT P++ P + P A+S
Sbjct: 636 YGMQYPPPPPHVTQAPPPGTTQNPSSS-EPQQSFPPGVQADS 676
>At4g16140.1 68417.m02445 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 164
Score = 32.7 bits (71), Expect = 0.85
Identities = 28/98 (28%), Positives = 33/98 (33%), Gaps = 11/98 (11%)
Query: 590 SPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQP 649
SP PP + P +P T P P +S P Y PP Q Y P
Sbjct: 46 SPPPPPSNPSPPPPSPTTTACPPPPSSSG-------GGPYYYYPPASQSGSYRPP---PS 95
Query: 650 MYSSPFVYSPMNPHTNYPMQQTTPQPNAQFTPTNTMNP 687
S + Y P NYP P P + P NP
Sbjct: 96 SSSGGYYYPPPKSGGNYP-YTPPPNPIVPYFPFYYYNP 132
>At4g34150.1 68417.m04846 C2 domain-containing protein similar to
calcium-dependent protein kinase [Dunaliella
tertiolecta] GI:6644464; contains Pfam profile PF00168:
C2 domain
Length = 247
Score = 32.3 bits (70), Expect = 1.1
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 10/95 (10%)
Query: 590 SPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQP----I 645
+P P A +P Y P + +P ST+ + +L+ QQY P G P
Sbjct: 139 APSAPYAPHVPQYSAPPSA-SPY-STAPPYSGPSLYPQVQQYPQPSGYPPASGYPPQPSA 196
Query: 646 YGQPMYSS----PFVYSPMNPHTNYPMQQTTPQPN 676
Y P S P Y P P + YP Q PQP+
Sbjct: 197 YPPPSTSGYPPIPSAYPPPPPSSAYPPQPYPPQPS 231
Score = 29.5 bits (63), Expect = 7.9
Identities = 19/67 (28%), Positives = 21/67 (31%)
Query: 600 PLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPMYSSPFVYSP 659
P Y P + P PS + P Y PPP QP QP Y Y
Sbjct: 181 PSGYPPASGYPPQPSAYPPPSTSGYPPIPSAYPPPPPSSAYPPQPYPPQPSYYPQGPYPG 240
Query: 660 MNPHTNY 666
P Y
Sbjct: 241 QYPPPPY 247
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 32.3 bits (70), Expect = 1.1
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 611 PVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPI---YGQPMYSSPFV----YSPMNPH 663
P +T+ + N Q P P Q + P Y QP S +V + PM
Sbjct: 784 PETNTTASGNTQPQSTMPYNQEPTQAQPNVLANPYDNQYQQPYTDSYYVPQVSHPPMQQP 843
Query: 664 TNYPMQQTTPQPNAQFTPTNTMN 686
T + Q P P FTP T N
Sbjct: 844 TMFMPHQAQPAPQPSFTPAPTSN 866
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 32.3 bits (70), Expect = 1.1
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 611 PVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPI---YGQPMYSSPFV----YSPMNPH 663
P +T+ + N Q P P Q + P Y QP S +V + PM
Sbjct: 786 PETNTTASGNTQPQSTMPYNQEPTQAQPNVLANPYDNQYQQPYTDSYYVPQVSHPPMQQP 845
Query: 664 TNYPMQQTTPQPNAQFTPTNTMN 686
T + Q P P FTP T N
Sbjct: 846 TMFMPHQAQPAPQPSFTPAPTSN 868
>At2g46180.1 68415.m05742 intracellular protein transport protein
USO1-related similar to Intracellular protein transport
protein USO1 (Swiss-Prot:P25386) [Saccharomyces
cerevisiae]
Length = 725
Score = 32.3 bits (70), Expect = 1.1
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 275 SQDPEKHTKLCDEQIKKSMVFRENIVKLMNEALTKPAEVAKQQMSKRCQDLASFMESLM- 333
++D +H DE+ + +E++ K + + L K E A+++ K Q+L + L+
Sbjct: 325 TEDLSRHLSSLDEEKAGTFPGKEDMEKSL-QRLEKELEEARREKDKARQELKRLKQHLLE 383
Query: 334 ---EEPPKNDEELRLEIQDPDHSYYERDSVM 361
EE K DE+ RL + + Y+R ++
Sbjct: 384 KETEESEKMDEDSRLIDELRQTNEYQRSQIL 414
>At3g52460.1 68416.m05769 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 300
Score = 31.9 bits (69), Expect = 1.5
Identities = 24/84 (28%), Positives = 29/84 (34%), Gaps = 10/84 (11%)
Query: 605 PMATMAPVPSTSEAANHQNLHNNP-----QQYAPPPMQCVLYGQPIYGQPMYSSPFVYSP 659
P P P T N + N P Q PPP P+ G P Y + P
Sbjct: 5 PEEETQPKPDTGPGQNSERDINQPPPPPPQSQPPPPQTQQQTYPPVMGYPGY-----HQP 59
Query: 660 MNPHTNYPMQQTTPQPNAQFTPTN 683
P+ NYP P AQ P +
Sbjct: 60 PPPYPNYPNAPYQQYPYAQAPPAS 83
>At3g02010.1 68416.m00162 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 825
Score = 31.9 bits (69), Expect = 1.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 20 VISMHDGIVMYTTSSLTATLGFPKDMWIGRSFIDFVHPRDR 60
V+ +HD + +L+ T GF +D +G +DF DR
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDR 300
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 31.9 bits (69), Expect = 1.5
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 2/105 (1%)
Query: 583 APQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYG 642
+P + SP PP+ P ++P + P + +H+ P PP
Sbjct: 551 SPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPPVHSPPPPVHSPPPPVHSPP 610
Query: 643 QPIYGQPMYSSPFVYSPMNPHTNYPMQQTTPQPNAQFTPTNTMNP 687
P+Y P P V+SP P + P +P P P +P
Sbjct: 611 PPVYSPP--PPPPVHSPPPPVFSPPPPVHSPPPPVYSPPPPVYSP 653
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 31.5 bits (68), Expect = 2.0
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Query: 584 PQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQ 643
P S + PP A P TP ++ P PST+ + + P PPP
Sbjct: 19 PTNSTTTTPPPAASSPPPTTTP-SSPPPSPSTNSTSPPPSSPLPPS--LPPPSPPGSLTP 75
Query: 644 PIYGQPMYSSPFVYSPMNPHT-NYPMQQTTPQPNAQFTPTNT 684
P+ QP S+P SP +P T + P +P TP+ +
Sbjct: 76 PL-PQPSPSAPITPSPPSPTTPSNPRSPPSPNQGPPNTPSGS 116
>At2g40820.1 68415.m05038 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 903
Score = 31.5 bits (68), Expect = 2.0
Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 7/94 (7%)
Query: 595 MAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPM---- 650
MAG + PM P +H ++ N P P MQ Y P+ P
Sbjct: 714 MAGSSQYPFAPMDQSNPFSVPPSYNHHSSMPNPPMTNTNPQMQQPYYPPPMQPPPPPMNS 773
Query: 651 -YSSPFVYSPMNPHT--NYPMQQTTPQPNAQFTP 681
Y ++ +N + N PM T PQ + P
Sbjct: 774 GYMPTYIPKSVNDSSMPNPPMNNTNPQMQQPYYP 807
>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 431
Score = 31.5 bits (68), Expect = 2.0
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 4/96 (4%)
Query: 590 SPVPPMAGMLP--LYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPP-MQCVLYGQPIY 646
SP PP+ P +Y++P S ++ P ++PPP + +Y P
Sbjct: 320 SPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPP 379
Query: 647 GQPMYSSPFVY-SPMNPHTNYPMQQTTPQPNAQFTP 681
YS P VY SP P Y + P P ++P
Sbjct: 380 PVKHYSPPPVYHSPPPPKEKYVYKSPPPPPVHHYSP 415
Score = 29.9 bits (64), Expect = 6.0
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 590 SPVPPMAGMLP--LYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPP-MQCVLYGQPIY 646
SP PP+ P +Y++P S ++ P ++PPP + +Y P
Sbjct: 68 SPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPP 127
Query: 647 GQPMYSSPFVY-SPMNPHTNYPMQQTTPQPNAQFTP 681
YS P VY SP P +Y + ++ P P ++P
Sbjct: 128 PVKHYSPPPVYHSPPPPKKHY-VYKSPPPPVKHYSP 162
Score = 29.9 bits (64), Expect = 6.0
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 590 SPVPPMAGMLP--LYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPP-MQCVLYGQPIY 646
SP PP+ P +Y++P S ++ P ++PPP + +Y P
Sbjct: 96 SPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPP 155
Query: 647 GQPMYSSPFVY-SPMNPHTNYPMQQTTPQPNAQFTP 681
YS P VY SP P +Y + ++ P P ++P
Sbjct: 156 PVKHYSPPPVYHSPPPPKKHY-VYKSPPPPVKHYSP 190
Score = 29.9 bits (64), Expect = 6.0
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 590 SPVPPMAGMLP--LYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPP-MQCVLYGQPIY 646
SP PP+ P +Y++P S ++ P ++PPP + +Y P
Sbjct: 124 SPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPP 183
Query: 647 GQPMYSSPFVY-SPMNPHTNYPMQQTTPQPNAQFTP 681
YS P VY SP P +Y + ++ P P ++P
Sbjct: 184 PVKHYSPPPVYHSPPPPKKHY-VYKSPPPPVKHYSP 218
Score = 29.9 bits (64), Expect = 6.0
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 590 SPVPPMAGMLP--LYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPP-MQCVLYGQPIY 646
SP PP+ P +Y++P S ++ P ++PPP + +Y P
Sbjct: 152 SPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPP 211
Query: 647 GQPMYSSPFVY-SPMNPHTNYPMQQTTPQPNAQFTP 681
YS P VY SP P +Y + ++ P P ++P
Sbjct: 212 PVKHYSPPPVYHSPPPPKKHY-VYKSPPPPVKHYSP 246
Score = 29.9 bits (64), Expect = 6.0
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 590 SPVPPMAGMLP--LYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPP-MQCVLYGQPIY 646
SP PP+ P +Y++P S ++ P ++PPP + +Y P
Sbjct: 180 SPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPP 239
Query: 647 GQPMYSSPFVY-SPMNPHTNYPMQQTTPQPNAQFTP 681
YS P VY SP P +Y + ++ P P ++P
Sbjct: 240 PVKHYSPPPVYHSPPPPKKHY-VYKSPPPPVKHYSP 274
Score = 29.9 bits (64), Expect = 6.0
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 590 SPVPPMAGMLP--LYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPP-MQCVLYGQPIY 646
SP PP+ P +Y++P S ++ P ++PPP + +Y P
Sbjct: 208 SPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPP 267
Query: 647 GQPMYSSPFVY-SPMNPHTNYPMQQTTPQPNAQFTP 681
YS P VY SP P +Y + ++ P P ++P
Sbjct: 268 PVKHYSPPPVYHSPPPPKKHY-VYKSPPPPVKHYSP 302
Score = 29.9 bits (64), Expect = 6.0
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 590 SPVPPMAGMLP--LYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPP-MQCVLYGQPIY 646
SP PP+ P +Y++P S ++ P ++PPP + +Y P
Sbjct: 236 SPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPP 295
Query: 647 GQPMYSSPFVY-SPMNPHTNYPMQQTTPQPNAQFTP 681
YS P VY SP P +Y + ++ P P ++P
Sbjct: 296 PVKHYSPPPVYHSPPPPKKHY-VYKSPPPPVKHYSP 330
Score = 29.9 bits (64), Expect = 6.0
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 590 SPVPPMAGMLP--LYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPP-MQCVLYGQPIY 646
SP PP+ P +Y++P S ++ P ++PPP + +Y P
Sbjct: 264 SPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPP 323
Query: 647 GQPMYSSPFVY-SPMNPHTNYPMQQTTPQPNAQFTP 681
YS P VY SP P +Y + ++ P P ++P
Sbjct: 324 PVKHYSPPPVYHSPPPPKKHY-VYKSPPPPVKHYSP 358
Score = 29.9 bits (64), Expect = 6.0
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 590 SPVPPMAGMLP--LYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPP-MQCVLYGQPIY 646
SP PP+ P +Y++P S ++ P ++PPP + +Y P
Sbjct: 292 SPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPP 351
Query: 647 GQPMYSSPFVY-SPMNPHTNYPMQQTTPQPNAQFTP 681
YS P VY SP P +Y + ++ P P ++P
Sbjct: 352 PVKHYSPPPVYHSPPPPKKHY-VYKSPPPPVKHYSP 386
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 31.1 bits (67), Expect = 2.6
Identities = 25/91 (27%), Positives = 33/91 (36%), Gaps = 5/91 (5%)
Query: 591 PVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPM 650
P PP + P T P P T + H +Y+PPP V Y P P
Sbjct: 716 PPPPHYSLPPPTPTYHYISPPPPPTPIHSPPPQSHPPCIEYSPPPPPTVHYNPPPPPSPA 775
Query: 651 YSSPFVYSPMNPHTNYPMQQTTPQPNAQFTP 681
+ SP P +P Y P P ++P
Sbjct: 776 HYSP----PPSPPVYY-YNSPPPPPAVHYSP 801
>At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 185
Score = 31.1 bits (67), Expect = 2.6
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 591 PVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPM---QCVLYGQP 644
P PP A L T P P + E +N H+N + PPP+ + GQP
Sbjct: 48 PPPPPANHLRRRTTTAVAGQPQPPSPENRRRRNHHHNDHRRQPPPLPENRAATAGQP 104
>At5g46780.2 68418.m05763 VQ motif-containing protein contains
PF05678: VQ motif
Length = 237
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 613 PSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPMYSSPFVYSP 659
PST +HQ NP + P Q L QP P++S F +SP
Sbjct: 163 PSTGLFQSHQT-GPNPMSFQSPASQFALSPQPRSPFPLFSPNFAFSP 208
Score = 29.5 bits (63), Expect = 7.9
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 564 PPSTNAAGNMNTFILGVGMAPQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQN 623
PP TN N+ ++ V AP L P PP P+ P+A+ PV ++ ++
Sbjct: 74 PPQTNHPKPPNSRLVKVRPAPLTQLNHPPPPPPPPPPVQSVPIAS-EPVQPVNQFSS--- 129
Query: 624 LHNNPQQYAPPPMQCVLYGQPIYGQPMYSSPFVYSPMNPHTN-YPMQQTTPQPNAQFTPT 682
N + M+ ++ P+ + P +P+ P T + QT P P + +P
Sbjct: 130 --NPAESPISAYMRYLIESSPVGNR---VQPQNQNPVQPSTGLFQSHQTGPNPMSFQSPA 184
Query: 683 N 683
+
Sbjct: 185 S 185
>At5g46780.1 68418.m05762 VQ motif-containing protein contains
PF05678: VQ motif
Length = 237
Score = 30.7 bits (66), Expect = 3.4
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 613 PSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPMYSSPFVYSP 659
PST +HQ NP + P Q L QP P++S F +SP
Sbjct: 163 PSTGLFQSHQT-GPNPMSFQSPASQFALSPQPRSPFPLFSPNFAFSP 208
Score = 29.5 bits (63), Expect = 7.9
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 564 PPSTNAAGNMNTFILGVGMAPQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQN 623
PP TN N+ ++ V AP L P PP P+ P+A+ PV ++ ++
Sbjct: 74 PPQTNHPKPPNSRLVKVRPAPLTQLNHPPPPPPPPPPVQSVPIAS-EPVQPVNQFSS--- 129
Query: 624 LHNNPQQYAPPPMQCVLYGQPIYGQPMYSSPFVYSPMNPHTN-YPMQQTTPQPNAQFTPT 682
N + M+ ++ P+ + P +P+ P T + QT P P + +P
Sbjct: 130 --NPAESPISAYMRYLIESSPVGNR---VQPQNQNPVQPSTGLFQSHQTGPNPMSFQSPA 184
Query: 683 N 683
+
Sbjct: 185 S 185
>At3g10180.1 68416.m01219 kinesin motor protein-related similar to
centromere protein E GB:4502781 [Homo sapiens]
Length = 1348
Score = 30.7 bits (66), Expect = 3.4
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 443 LLTKHNDEMEKELINMHRESRSNSKGERDKTSNETRQKKKEHLAR 487
L T H+D E+E++N+ R + S+ ER++ + E ++KK R
Sbjct: 357 LKTSHSDHSEEEILNL-RNTLLKSELERERIALELEEEKKAQAQR 400
>At1g23050.1 68414.m02880 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 161
Score = 30.7 bits (66), Expect = 3.4
Identities = 23/77 (29%), Positives = 26/77 (33%), Gaps = 4/77 (5%)
Query: 591 PVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPM 650
P PP+ G TP T P P N+ N Y PP Y P YG
Sbjct: 38 PTPPIGGGSS---TPSMTQPP-PYPPPGVNYPTPAGNLPNYPPPVGNIPNYPSPPYGGGD 93
Query: 651 YSSPFVYSPMNPHTNYP 667
S Y P P+ P
Sbjct: 94 SSGSSFYGPPPPNAILP 110
>At1g21810.1 68414.m02729 expressed protein
Length = 628
Score = 30.7 bits (66), Expect = 3.4
Identities = 18/75 (24%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 276 QDPEKHTKLCDEQIKKSMVFRENIVKLMNEALTK-PAEVAKQQMSKRCQDLASFMESLME 334
+D + +++C ++++ + + +KL NE+ T+ + V + + R + + S + L E
Sbjct: 413 KDQYQESRVCFQEVEMKLEAMKRELKLANESKTQAESRVTRMEAEVRKERIVS--DGLKE 470
Query: 335 EPPKNDEELRLEIQD 349
+ +EELR EI++
Sbjct: 471 KCETFEEELRREIEE 485
>At4g33760.1 68417.m04793 tRNA synthetase class II (D, K and N)
family protein similar to SP|P36419 Aspartyl-tRNA
synthetase (EC 6.1.1.12) (Aspartate--tRNA ligase)
(AspRS) {Thermus thermophilus}; contains Pfam profile
PF00152: tRNA synthetases class II (D, K and N)
Length = 664
Score = 30.3 bits (65), Expect = 4.5
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 163 FVMRHSANGNLEYL---DPESVPYLGYLPQDVQDKDALQLYHPEDLEYLQQVYEVIVKDG 219
+V H +G L +L D + + LP + + A L + LEY+ V E V+
Sbjct: 96 WVALHRVHGGLTFLNLRDHTGIVQVRTLPDEFPE--AHGLINDMRLEYVVLV-EGTVRS- 151
Query: 220 GMPRSKTYRMMTQNGDYIKIETEWSSFINPWSKKLEFVIGKHYIIEGPENPDVFQSQDPE 279
P + M ++++ E +NP KL F++ EN D+ + +
Sbjct: 152 -RPNESVNKKMKTG--FVEVVAEHVEILNPVRTKLPFLV-----TTADENKDLIKEEIRL 203
Query: 280 KHT--KLCDEQIKKSMVFRENIVKLMNEAL 307
+ L +Q+K ++V R N+VKL+ L
Sbjct: 204 RFRCLDLRRQQMKNNIVLRHNVVKLIRRYL 233
>At3g62680.1 68416.m07041 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 313
Score = 30.3 bits (65), Expect = 4.5
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
Query: 602 YYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPMYSSPFVYSPMN 661
YY+P + P ++ H+ +P Y PP + L P+Y +P P P+
Sbjct: 24 YYSPSS-----PPVYKSPEHKPTLPSPV-YTPPVYKPTL-SPPVYTKPTIPPPVYTPPVY 76
Query: 662 PHTNYPMQQTTPQ-PNAQFTP 681
HT P T P P +TP
Sbjct: 77 KHTPSPPVYTKPTIPPPVYTP 97
>At4g17720.1 68417.m02646 RNA recognition motif (RRM)-containing
protein
Length = 313
Score = 29.9 bits (64), Expect = 6.0
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 461 ESRSNSKGERDKTSNETRQKKKEHLARCKASFHPTATSTTPVDKEVYKKPHG--VKRASK 518
E +K + E ++K + AR S P A S+T + K K+ S+
Sbjct: 228 EVGQKAKEKVGMAEEEDKRKVVDEFARVHLSESPKAASSTQEAERESKLSESPEAKKDSE 287
Query: 519 HIETETVSHKYHCPSPRASRP 539
H+E ++ + P P AS P
Sbjct: 288 HLEPQSKPLQQQSPPPMASAP 308
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 29.9 bits (64), Expect = 6.0
Identities = 26/106 (24%), Positives = 33/106 (31%), Gaps = 8/106 (7%)
Query: 584 PQMSLISPVPPMAGMLPLYYTPM--ATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLY 641
P+ + P PP P YTP P P + + P Y PP
Sbjct: 61 PKPPTVKPPPPYIPCPPPPYTPKPPTVKPPPPPYVKPPPPPTVKPPPPPYVKPPPP---- 116
Query: 642 GQPIYGQPMYSSPFVYSPMNPHTNYPMQQTTPQPNAQFTPTNTMNP 687
P P +P+ P P+T P P P P T P
Sbjct: 117 --PTVKPPPPPTPYTPPPPTPYTPPPPTVKPPPPPVVTPPPPTPTP 160
>At1g59660.1 68414.m06710 nucleoporin family protein contains Pfam
profiles: PF04096 nucleoporin autopeptidase, PF03093
nucleoporin FG repeat family
Length = 997
Score = 29.9 bits (64), Expect = 6.0
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 652 SSPFVYSPMNPHTNYPMQQTTPQPNAQFTPT 682
S F +P+NP TN P QTTP N F+P+
Sbjct: 414 SPAFSQTPVNP-TN-PFSQTTPTSNTNFSPS 442
>At1g37020.1 68414.m04616 Ulp1 protease family protein
Length = 611
Score = 29.9 bits (64), Expect = 6.0
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 282 TKLCDE--QIKKSMVFRENIVKLMNEALTKPAEVAKQQMSKRCQ-DLASFMESLMEEPPK 338
T + DE ++ K + EN +K + E+ PA+V+ ++ + D A+F +E P
Sbjct: 201 TPIDDERAELSKRLAAVENDLKALKES--HPADVSINDVTSNNKGDDATFNNDKEDETPN 258
Query: 339 NDEELRLEIQDPDHSYYERDSVM 361
+ EL+L+I+D ++ ++M
Sbjct: 259 KELELQLKIKDATKGKKKKVAIM 281
>At3g10650.1 68416.m01281 expressed protein
Length = 1309
Score = 29.5 bits (63), Expect = 7.9
Identities = 33/152 (21%), Positives = 56/152 (36%), Gaps = 13/152 (8%)
Query: 533 SPRASRPRQTTSAAPVQXXXXXXXXXXXXXWPPSTNAAGNMNTFILGVGMAPQMSLISPV 592
S AS +TSAAP PPS + + +F + P + + +
Sbjct: 728 SNSASGAESSTSAAPTLNGSIFSAGANAVTPPPSNGSLTSSPSFPPSISNIPSDNSVGDM 787
Query: 593 PPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPMYS 652
P + + +P TS +N Q+ +P P +GQP +
Sbjct: 788 PSTVQSFAATHNSSSIFGKLP-TSNDSNSQSTSASPLSSTSP----FKFGQP-------A 835
Query: 653 SPFVYSPMNPHTNYPMQQTTPQPNAQFTPTNT 684
+PF +P ++ + + T NA F T+T
Sbjct: 836 APF-SAPAVSESSGQISKETEVKNATFGNTST 866
>At3g01560.1 68416.m00086 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 511
Score = 29.5 bits (63), Expect = 7.9
Identities = 33/119 (27%), Positives = 40/119 (33%), Gaps = 9/119 (7%)
Query: 573 MNTFILGVGMAPQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYA 632
M F L P S +P P + LP + P ++ Q +NP Y
Sbjct: 245 MQQFPLTSFPQPPSSTAAPSQPPSSQLPPQLPTQFSSQQEPYCPPPSHPQPPPSNPPPYQ 304
Query: 633 PPPMQCVLYGQPIY----GQPMY-SSPFVYSPMNPHTN--YPMQQTTPQPNAQFTPTNT 684
P Q QP Y QP Y P S NP Y MQ P P Q P +
Sbjct: 305 APQTQTP--HQPSYQSPPQQPQYPQQPPPSSGYNPEEQPPYQMQSYPPNPPRQQPPAGS 361
>At2g46840.1 68415.m05845 expressed protein ; expression supported
by MPSS
Length = 205
Score = 29.5 bits (63), Expect = 7.9
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 455 LINMHRESRSNSKGERDKTSNETRQKKKEHLARCKASFHPTATS 498
L M RES KG +K + K K+ L RCK+SF T+
Sbjct: 162 LRKMRRESLRQQKG-MEKEMADDYSKLKKSLVRCKSSFEDKETA 204
>At2g24690.1 68415.m02948 transcriptional factor B3 family protein
low similarity to reproductive meristem protein 1
[Arabidopsis thaliana] GI:13604227; contains Pfam
profile PF02362: B3 DNA binding domain
Length = 682
Score = 29.5 bits (63), Expect = 7.9
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Query: 445 TKHNDEMEKELINMHRESRSNS-KGERDKTSNETRQKKKEHLARCKASFHPTATSTTPVD 503
T+ +E KE + S+ K + +K + T +++ HL RCK S P+ T V
Sbjct: 132 TRVGEESSKESLPAEPSSQEKIVKDDNNKDESSTWKREGNHL-RCKDSTSPSQNCTLTVT 190
Query: 504 KEVYKKPHGVKRASKHIETETVSHK 528
HG R TE +K
Sbjct: 191 ITPDSLEHGRLRLPLQFMTENSMNK 215
>At1g22610.1 68414.m02823 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1029
Score = 29.5 bits (63), Expect = 7.9
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 632 APPPMQCVLYGQPIYGQPMYSSPFVYSPMNPHTNYPMQQTTP-QPNAQFTPTNTMNPL 688
APP Q P QP + S F+ +P P T MQ P Q N +F T PL
Sbjct: 210 APPMSQAKQAYPPPPNQPEFRSDFMRAP-GPPTGAVMQMQPPRQQNPEFQLIETSPPL 266
>At1g07360.1 68414.m00785 zinc finger (CCCH-type) family protein /
RNA recognition motif (RRM)-containing protein similar
to SP|O59800 Cell cycle control protein cwf5
{Schizosaccharomyces pombe}, RNA Binding Protein 47
[Nicotiana plumbaginifolia] GI:9663769; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 481
Score = 29.5 bits (63), Expect = 7.9
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Query: 598 MLPLYYT-PMATMAPVPSTSEAANHQNLHNNP---QQYAPPPMQCVLYGQPIYGQPMYSS 653
M+P + + P +PS + N H+ P Q YAPPP QP G S
Sbjct: 385 MMPPHQSYPPPPYGYMPSPYQQQYPPNHHHQPSPMQHYAPPPAAYPYPQQPGPGSRPAPS 444
Query: 654 PFVYSPMNPHTNYPMQQTTPQPNAQFTP 681
P S ++P + P P ++Q P
Sbjct: 445 PTAVSAISP-DSAPAGSGAPSGSSQQAP 471
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.130 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,959,117
Number of Sequences: 28952
Number of extensions: 754143
Number of successful extensions: 2743
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 2624
Number of HSP's gapped (non-prelim): 129
length of query: 699
length of database: 12,070,560
effective HSP length: 86
effective length of query: 613
effective length of database: 9,580,688
effective search space: 5872961744
effective search space used: 5872961744
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 63 (29.5 bits)
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