Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000486-TA|BGIBMGA000486-PA|IPR013767|PAS fold,
IPR013655|PAS fold-3, IPR000014|PAS
(699 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 39 0.003
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 38 0.006
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 35 0.044
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.077
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.13
SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces po... 32 0.23
SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomy... 30 0.95
SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyc... 30 0.95
SPBC9B6.11c |||CCR4/nocturin family endoribonuclease|Schizosacch... 30 0.95
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 29 1.7
SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces pom... 29 2.2
SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subun... 29 2.2
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 29 2.9
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 28 3.8
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 28 3.8
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 28 5.0
SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces pomb... 28 5.0
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 5.0
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 28 5.0
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 27 6.7
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 6.7
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 27 6.7
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 27 6.7
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 27 6.7
SPBC19C7.11 |||ClC chloride channel |Schizosaccharomyces pombe|c... 27 6.7
SPAC9E9.14 |vps24||vacuolar sorting protein Vps24|Schizosaccharo... 27 6.7
SPCC584.03c |||RanGTP-binding protein |Schizosaccharomyces pombe... 27 8.8
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 27 8.8
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 27 8.8
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 27 8.8
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 27 8.8
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 27 8.8
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 4/101 (3%)
Query: 600 PLYYTPMATMAPVPSTSEAANHQN---LHNNPQQYAPPPMQCVLYGQPIYGQPMYSSPFV 656
P+++ P M P P E H +H+ P ++ PPP G+ + PM+ P
Sbjct: 250 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGE 309
Query: 657 YSPMNPHTNYPMQQTTPQPNAQFTPTNTMNPLCLANSNYEE 697
+ P P + P + P P P M P + EE
Sbjct: 310 HMPPPPMHHEPGEHMPPPP-MHHEPGEHMPPPPFKHHELEE 349
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 600 PLYYTPMATMAPVPSTSEAANHQN---LHNNPQQYAPPPMQCVLYGQPIYGQPMYSSPFV 656
P+++ P M P P E H +H+ P ++ PPP G+ + PM+ P
Sbjct: 211 PMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGE 270
Query: 657 YSPMNPHTNYPMQQTTPQP 675
+ P P + P + P P
Sbjct: 271 HMPPPPMHHEPGEHMPPPP 289
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 600 PLYYTPMATMAPVPSTSEAANHQN---LHNNPQQYAPPPMQCVLYGQPIYGQPMYSSPFV 656
P+++ P M P P E H +H+ P ++ PPP G+ + PM+ P
Sbjct: 224 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGE 283
Query: 657 YSPMNPHTNYPMQQTTPQP 675
+ P P + P + P P
Sbjct: 284 HMPPPPMHHEPGEHMPPPP 302
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 600 PLYYTPMATMAPVPSTSEAANHQN---LHNNPQQYAPPPMQCVLYGQPIYGQPMYSSPFV 656
P+++ P M P P E H +H+ P ++ PPP G+ + PM+ P
Sbjct: 237 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGE 296
Query: 657 YSPMNPHTNYPMQQTTPQP 675
+ P P + P + P P
Sbjct: 297 HMPPPPMHHEPGEHMPPPP 315
Score = 35.5 bits (78), Expect = 0.025
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 600 PLYYTPMATMAPVPSTSEAANHQN---LHNNPQQYAPPPMQCVLYGQPIYGQPMYSSPFV 656
P ++ P M P P + H +H+ P ++ PPP G+ + PM+ P
Sbjct: 198 PAHHEPGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGE 257
Query: 657 YSPMNPHTNYPMQQTTPQP 675
+ P P + P + P P
Sbjct: 258 HMPPPPMHHEPGEHMPPPP 276
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 37.5 bits (83), Expect = 0.006
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 592 VPPMAGMLPLYYTPMATMA-PVPSTSEAANHQNL----HNNPQQYAPPPMQCVLYGQPIY 646
VPPM GM PL ++P+ + A P+P + ++H ++ P APP V Y PI
Sbjct: 294 VPPM-GMYPLPFSPLPSAAPPIPFSPNVSSHPHMAFLPATVPTHSAPPGF--VPYDFPIT 350
Query: 647 GQPMYSSPFVYSPMNPHTNYPMQQTTPQPNAQFTPTNTMNP 687
MY SP + P T+ T NA P M+P
Sbjct: 351 NDKMYPSP-SFQEEFPSTSKSPSATPGSSNA---PVVDMHP 387
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 34.7 bits (76), Expect = 0.044
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 446 KHNDEMEKELINMHRESRSNSKGERDKTSNETRQKKKEHLARCKASFHPTATSTTPVDKE 505
K+ K L+ HRE R K + +K +N T+QK ++ K + TA DK
Sbjct: 539 KYRPNARKPLVGRHREKRQLRKEKPEKKNNSTKQKDLITVSHNKGT---TAIEDLDEDKR 595
Query: 506 VYKKPHGVKRASKH 519
K H K + H
Sbjct: 596 SKTKGHKTKSSRVH 609
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.9 bits (74), Expect = 0.077
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Query: 582 MAPQMSLISPV--PPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQC- 638
+ P +PV PP A LP PM P P S+A N + P +APP
Sbjct: 171 LPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP-VANTSSRPSSFAPPAGHAP 229
Query: 639 -VLYGQPIYGQPMYSSPFVYSPMNPHTNYPMQQ 670
V P + S P P P ++Y +QQ
Sbjct: 230 NVTSESPKFPNRGPSIPSASVPPVPPSSYVLQQ 262
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.1 bits (72), Expect = 0.13
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 579 GVGMAPQMSLISP-VPPMAGMLPLYYTPMATMAPVPSTSEA----ANHQNLHNNPQQYAP 633
G P+ S+ +P VP + +P P A + PVP SEA + P
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
Query: 634 PPMQCVLYGQPIYGQPMYSSPFVYSPMN--PHTNYPMQQTTPQPNAQFTPTNTMNPLCLA 691
PP+ G P P +P V +P + P + P + + P P++ +P+ T + + A
Sbjct: 1217 PPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTP-RSSVPSPHSNASPSPTSSSMASA 1275
Score = 28.7 bits (61), Expect = 2.9
Identities = 31/141 (21%), Positives = 49/141 (34%), Gaps = 7/141 (4%)
Query: 478 RQKKKEHLARCKASFHPTATSTTPVDKEVYKKPHGVKRASKHIETETVSHKYHCPSPRAS 537
+Q E A A T S+T + +E+ + ++ +K K P P A
Sbjct: 907 KQDVTESKASPVADASATHQSSTGLTQEITQLGSNMRLPTKLTRPSNDGRKASGPRPAA- 965
Query: 538 RPRQTTSAAPVQXXXXXXXXXXXXXWPPSTNAAGNMNTFILGVGMAPQMSLISPVPPMAG 597
P PV PPS + ++T A ++ + PVP ++
Sbjct: 966 -PPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVST-----SPAAPLARVPPVPKLSS 1019
Query: 598 MLPLYYTPMATMAPVPSTSEA 618
P P A P+P S A
Sbjct: 1020 KAPPVPLPSADAPPIPVPSTA 1040
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 578 LGVGMAPQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEAA 619
+GV P S PVP + LP P A PVP+ S A
Sbjct: 1205 VGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEA 1246
Score = 27.1 bits (57), Expect = 8.8
Identities = 29/98 (29%), Positives = 36/98 (36%), Gaps = 7/98 (7%)
Query: 579 GVGMAPQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQC 638
G P S I PVP + P P + PVP+ S A P APP
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP----KPSVAAPPVP-- 1134
Query: 639 VLYGQPIYGQPMYSSPFVYSPMN-PHTNYPMQQTTPQP 675
V G P +P ++P V +P P P P P
Sbjct: 1135 VPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
>SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 549
Score = 32.3 bits (70), Expect = 0.23
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 445 TKHNDEMEKELINMHRESRSNSKGERDKTSNETRQKKKEHLARCKASFHPTATSTTPVDK 504
TKH E IN+ +R + + + DK N + H R S+HP + S + K
Sbjct: 285 TKHYKNEWAESINLDNFNRPSQQEDYDKPKNTQVSRSSNHHRRYD-SYHPDSRSDSYRSK 343
Query: 505 EVYKKPHGVKRASKHIE 521
+ SKH+E
Sbjct: 344 REHYDNRDTGPRSKHLE 360
>SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 427
Score = 30.3 bits (65), Expect = 0.95
Identities = 19/58 (32%), Positives = 25/58 (43%)
Query: 296 RENIVKLMNEALTKPAEVAKQQMSKRCQDLASFMESLMEEPPKNDEELRLEIQDPDHS 353
R+ + E L K E + K+ Q A +L EP DE RL I+ PD S
Sbjct: 281 RQAFARAEEERLAKEKEEREIVQKKKKQYRAWLASNLPPEPSSEDEPARLSIRFPDGS 338
>SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 164
Score = 30.3 bits (65), Expect = 0.95
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
Query: 239 IETEWSSFINPWSKKLEFVIGKHYIIEGPENPDVFQSQDPEKHTKLCDEQIKKSMVFREN 298
I E+ S WS++L Y+ E D++ Q ++ + E+ M EN
Sbjct: 52 IAAEFKSLPKDWSERLASENPADYVACIEELLDIYPMQGGREYLETLVEKYNLHMSGIEN 111
Query: 299 IVKLMNEALTKPAEVAKQQMSKRCQDLASFMESLMEEPPKNDEELRLEIQ 348
L N L + ++ QQ+ KR D S E++++ + L EI+
Sbjct: 112 ---LENVLLEQKEQL--QQLEKRQTDQVSARENILQRETSEIQRLEREIE 156
>SPBC9B6.11c |||CCR4/nocturin family
endoribonuclease|Schizosaccharomyces pombe|chr
2|||Manual
Length = 502
Score = 30.3 bits (65), Expect = 0.95
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 449 DEMEKELINMHRESRSNSKGERDKTSNETRQKKKEHLARCKASFHPTATSTTP 501
D +E+ + + ES K KT N++ + KE S P +T++TP
Sbjct: 325 DIIERSMNYVFGESELEEKNASTKTENDSNEDDKEECQSSSTSSVPESTASTP 377
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 455 LINMHRESRSNSKGERDKTSNETRQKKKEHLARCKASFHPTATSTTPVD-KEVYKKPHGV 513
L++M RS S+ + S R KK R + S PT +S PV+ K KP
Sbjct: 641 LLSMFEIPRSPSRFKARSPSKAARVLKKPLKKRVRFSEVPTTSSVPPVEIKNKDSKPKVE 700
Query: 514 KRASKH 519
K KH
Sbjct: 701 KSLDKH 706
>SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 592
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 317 QMSKRCQDLASFMESLMEEPPKNDEELRLEIQDPDHSYYERDSVM 361
++SK F+ESL + +E ++L+I+ PD+ Y+ +S +
Sbjct: 250 RISKEADIGIMFLESLCTDDILFEENIKLKIKGPDYEGYDTESAL 294
>SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subunit
Rpa34 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 251
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 439 LTEFLLTKHNDEMEKELINMHRESRSN-SKGERDKTSNETRQKKKE 483
+ E +L + D +EL N +E + KG+R+K E + KKK+
Sbjct: 196 IKEHILQETGDATVEELQNKGKEKQKELKKGKREKKDEEEKPKKKK 241
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 657 YSPMNPHTNYPMQQTTPQPNAQFTPTNTMN 686
Y P P+ PQ N++F+ TN MN
Sbjct: 431 YQPKRQQNFKPLTSDLPQKNSEFSETNAMN 460
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 28.3 bits (60), Expect = 3.8
Identities = 36/172 (20%), Positives = 56/172 (32%), Gaps = 10/172 (5%)
Query: 534 PRAS-RPRQTTSAAPVQXXXXXXXXXXXXXWPPSTNAAGNMN--TFILGVGMAPQMSLIS 590
PR++ P + P Q PPS + A + I+ + Q
Sbjct: 58 PRSTLHPLLSQQQQPAQQSPSLGPAQQNIQQPPSVSIASQPHYAEAIVPIQQVLQPQQYR 117
Query: 591 PVPP---MAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYG 647
+PP A P + + M P+ S+++ L N Y P P+Q QP
Sbjct: 118 QLPPNMVAATNAPQQHPQLQRMMPILSSNQPIQQLPLPNQASPYIPVPLQQQQQSQP-QQ 176
Query: 648 QPMYSSPFVYSPMNPH-TNYPMQQTTPQPNAQFTPTNTMNPLCLANSNYEEV 698
QP P P P+QQ Q ++ + N Y +
Sbjct: 177 QPQQQQH--QQPQQPQPPQQPLQQQQQQRQLHSGIQQPVSTIVSQNGTYYSI 226
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Query: 602 YYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIY 646
Y TP TMA P + H NPQ PPP P+Y
Sbjct: 30 YLTPSGTMAYHPGNAPLFTQAPPHTNPQG--PPPFPLFNSISPVY 72
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 27.9 bits (59), Expect = 5.0
Identities = 34/156 (21%), Positives = 61/156 (39%), Gaps = 23/156 (14%)
Query: 541 QTTSAAPVQXXXXXXXXXXXXXWPPSTNAAGNMNTFILGVGMAPQMSLISPVPPMAGMLP 600
Q++S +P + PS++ + +++ V A + +SP P + +
Sbjct: 358 QSSSNSPAPYVYRNNLPPSATSFQPSSSRSPSVDPNT--VKSAQHIPRMSPSPSASALKT 415
Query: 601 LYYTPMATMAPVPSTSEAANHQ--------NLHNNPQQYAPPPMQCVLYGQPIYGQPMYS 652
+ P A + P + A N N+P PP +Q ++G+ +YG
Sbjct: 416 QSHVPSAKVPPTSKLNHAQLAMLKSQIVAYNCLNSPNGQVPPAVQQAIFGR-VYGASNEV 474
Query: 653 SPFVYSPMNPHTNYPMQQTTPQPNA--QFTPTNTMN 686
SP + P QQ PQ ++ + TPT N
Sbjct: 475 SP----------SMPFQQNVPQMSSVKKDTPTRDAN 500
>SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 641 YGQPIYG--QPMYSSPF-VYSPMNPHTNYPMQQTTPQPNAQFTPTN 683
Y QP + P+Y+ YS NP Y Q + P P F P +
Sbjct: 459 YPQPSFPPFHPIYNDSIGYYSQANPQMYYANQVSAPPPQGSFDPNS 504
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.9 bits (59), Expect = 5.0
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 5/99 (5%)
Query: 592 VPPMAGML-PLYYTPMATMAPVPSTSEAANHQNL-HNNPQQYAPPPMQCVLYGQPIYGQP 649
VPP+ P YTP+A +PV + S ++ N+ +NP Y P + +P
Sbjct: 945 VPPVQQPSHPNPYTPVAPQSPVAAASRISSSPNMPPSNP--YTPIAVASSTVNPAHTYKP 1002
Query: 650 MYSSPFVYSPMNPHTN-YPMQQTTPQPNAQFTPTNTMNP 687
S V P P P+ T Q + + P P
Sbjct: 1003 HGGSQIVPPPKQPANRVVPLPPTASQRASAYEPPTVSVP 1041
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 285 CDEQIKKSMVFRENIVKLMNEALTKPAEVA--KQQMSKRCQDLASFMESLMEEPPKNDEE 342
C+ +++M +N+ KLM++ + + ++V+ K+ K DL + SL ND+
Sbjct: 824 CENLTQQNMTLIDNVQKLMHKHVNQESKVSELKEVNGKLSLDLKNLRSSLNVAISDNDQI 883
Query: 343 L-RLEIQDPDHSYYERDSVML 362
L +L ++ E++S L
Sbjct: 884 LTQLAELSKNYDSLEQESAQL 904
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 27.5 bits (58), Expect = 6.7
Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 1/98 (1%)
Query: 448 NDEMEKELINMHRESRSNSKGERDKTSNETRQK-KKEHLARCKASFHPTATSTTPVDKEV 506
+D KE + R RSN R+++ NE K+EH R + T D+
Sbjct: 163 SDRKSKERRHRDRHHRSNQDRSRERSDNEQHSSDKREHSRRSYRNDRNNWRERTHNDRYR 222
Query: 507 YKKPHGVKRASKHIETETVSHKYHCPSPRASRPRQTTS 544
++ + KH + + + H R + TS
Sbjct: 223 HRDKYDSGYFKKHYDDDMRFDQGHFQDERDLKKYVRTS 260
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 6.7
Identities = 22/71 (30%), Positives = 26/71 (36%), Gaps = 3/71 (4%)
Query: 607 ATMAPVPS--TSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPMYSSPFVYSPMNPHT 664
+ AP+P+ T PQ A P Q LY QP QP S P
Sbjct: 1006 SVQAPIPAQPTGNITIQNAYFTAPQPMAADPFQSPLYVQPTGFQPP-PSALPIQPTGYMQ 1064
Query: 665 NYPMQQTTPQP 675
P+Q T QP
Sbjct: 1065 PIPVQATGYQP 1075
Score = 27.1 bits (57), Expect = 8.8
Identities = 31/114 (27%), Positives = 42/114 (36%), Gaps = 8/114 (7%)
Query: 581 GMAPQMSLISPVPPMAGM-LPLYYTPMATMAPVPSTSEAANHQNLHNNPQQY----APPP 635
GM + S P +G+ P P + ++P PS + + P Y PPP
Sbjct: 136 GMDASSAPASQEPSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
Query: 636 MQCVLYGQPIYGQP--MYSSPFVYSPMNPHTNYPMQQTTPQPNAQFTPTNTMNP 687
V +P YSS SP P T Y +Q P P P T+ P
Sbjct: 196 PPAVEDQAADANEPDDYYSSGRAVSPEIPPT-YTPKQADPLPAPPPPPPPTLPP 248
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 27.5 bits (58), Expect = 6.7
Identities = 30/97 (30%), Positives = 37/97 (38%), Gaps = 20/97 (20%)
Query: 577 ILGVGMAPQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEAAN------HQNLHNN--P 628
+ G+ + P S+ PP +G P Y A P S S AA QN P
Sbjct: 42 VRGLTIPPPPSVDHSAPP-SGPPPSYSNSAAPATPAASASSAAPAPAPAASQNRAYGAAP 100
Query: 629 QQYAPP---PMQCVLY--------GQPIYGQPMYSSP 654
Q Y P P Q Y QP Y QP+Y+ P
Sbjct: 101 QPYPPQGGYPQQPYYYPNQPNYYPAQPAYAQPVYAQP 137
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 27.5 bits (58), Expect = 6.7
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 621 HQNLHNNPQQYAPPPMQCVLYGQPIYGQPMYSSP---FVYSPMNPHTNYPMQQTTPQPNA 677
H ++H+ P PP + VL +P+ + S P V+S + + PQ +
Sbjct: 186 HPSIHDAPYSSPFPPPRIVLGSKPVSSSTLPSKPKSFQVFSDASSSRDSQNASDLPQAKS 245
Query: 678 QFTPTNTMN-PLCLANSNYEEV 698
+ NT N PL S+ + V
Sbjct: 246 LESEANTPNLPLLYDKSSGKRV 267
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 27.5 bits (58), Expect = 6.7
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 444 LTKHNDEMEKELINMHRES-RSNSKGERDKT-SNETRQKKKEHLARCKASFHPTATSTTP 501
L K D + +N + E+ S++K E T S ET+ +KK +A+ P+ +++TP
Sbjct: 6 LKKQADAAVESDVNTNNEAVESSTKEESSNTPSTETQPEKKAE--EPEAAAEPSESTSTP 63
Query: 502 VDKEVYKKPHGVKRAS 517
+ P G S
Sbjct: 64 TNASSVATPSGTAPTS 79
>SPBC19C7.11 |||ClC chloride channel |Schizosaccharomyces pombe|chr
2|||Manual
Length = 812
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 236 YIKIETEWSSFINPWSKKLEFVIGKHYIIE---GPENPDVFQSQDPEKHTK 283
++ + T SF+NPW +L+ +G + + +P++ DP TK
Sbjct: 414 FVTVITSLVSFLNPW-LRLDMTLGMELLFQECKSSSSPELINLCDPSLRTK 463
>SPAC9E9.14 |vps24||vacuolar sorting protein
Vps24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 27.5 bits (58), Expect = 6.7
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 252 KKLEFVIGKHYIIEGPENPDVFQSQDPEKHTKLCDEQIK-KSMVFRENIVKLMNEALTKP 310
+ L + K ++E + +D E+ L DE + + ++ + N++ +E K
Sbjct: 129 RNLSMELTKAGVLEEMRDEMFLPVEDDEELMDLADEDEEVQEILTKYNVIPAPSE---KA 185
Query: 311 AEVAKQQMSKRCQDLASFMESLMEEPPKNDEELRLEIQD 349
A+ A + Q L S + ++ + DEE L+I+D
Sbjct: 186 ADAATHREQSLKQALPSLSNGIAKDSTEIDEEQLLDIRD 224
>SPCC584.03c |||RanGTP-binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 551
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 255 EFVIGKHYIIEGPENPDVFQSQDPEKHTKLCDEQIK 290
E +I K +I+ ENP V +PE +K+ + Q K
Sbjct: 506 EDLISKDSVIKLKENPSVIPHSEPESSSKVINCQAK 541
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 15 DGFSCVISMHD---GIVMYTTSSLTATLGFPKDMWIGRSFIDFVHPRDRSTFASQI 67
D C++ D G + YT +S G P+D S+ F+HP F ++
Sbjct: 1634 DSLPCIVWTLDSDIGEIEYTNASKRNYFGVPEDCHDSLSWKTFIHPDHHHQFQEKL 1689
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 606 MATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPMYSSPFV 656
+ T++ PSTS A+ Q H Q PP Q + QPI P P +
Sbjct: 492 LTTLSATPSTSRLASTQLQHTGSSQL--PPQQ---FSQPINSLPKGGVPIL 537
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 583 APQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHN 626
AP +S+ P M G Y TP++++ + T+ N N ++
Sbjct: 354 APTLSVSGTTPGMTGSTSEYVTPVSSVNSMRETASPLNADNQYS 397
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 27.1 bits (57), Expect = 8.8
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 189 QDVQDKDALQLYHPE-DLEYLQQVYEVIVKDGGMPRSKTYRMMTQNGDYIKIETEWSSFI 247
Q V+D + ++++ E D++ V I D + Y+ Q+ +Y+KI T +
Sbjct: 748 QQVRDNEEIEVHINELDVKIALLVKNKISLDDVLKHHNKYKFGKQSTEYLKINTLSMKSL 807
Query: 248 NPWSKK-LEFVIGKHYIIEGPE 268
N S+K LE Y+++ E
Sbjct: 808 NNSSRKFLELYQCFFYVLQTNE 829
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 27.1 bits (57), Expect = 8.8
Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 14/98 (14%)
Query: 587 SLISPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQY---APPPMQCVLYG- 642
S++ P M +P+Y TP TM +P + NP Q+ AP P G
Sbjct: 575 SIVLPNSAMPSAMPMYPTP--TMPYIPVGYPVPGYTPYMRNPSQHTSVAPSPNGTPTSGN 632
Query: 643 QPIYGQPM--YSSPFVYSPMNPHTNYPMQQTTPQPNAQ 678
G PM Y +P P Y M Q P N +
Sbjct: 633 SSTVGSPMIGYMAPQFIPP------YAMPQFPPSGNGR 664
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.130 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,331,676
Number of Sequences: 5004
Number of extensions: 148627
Number of successful extensions: 572
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 531
Number of HSP's gapped (non-prelim): 58
length of query: 699
length of database: 2,362,478
effective HSP length: 78
effective length of query: 621
effective length of database: 1,972,166
effective search space: 1224715086
effective search space used: 1224715086
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -