Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000486-TA|BGIBMGA000486-PA|IPR013767|PAS fold,
IPR013655|PAS fold-3, IPR000014|PAS
(699 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 5e-15
SB_28816| Best HMM Match : PAS (HMM E-Value=0.0047) 77 4e-14
SB_27525| Best HMM Match : PAS (HMM E-Value=0.99) 51 4e-06
SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 1e-05
SB_33294| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-04
SB_25662| Best HMM Match : HLH (HMM E-Value=2.3e-14) 43 7e-04
SB_27523| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-09) 38 0.021
SB_3546| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-29) 38 0.021
SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034) 38 0.027
SB_15627| Best HMM Match : AMPKBI (HMM E-Value=3e-36) 36 0.11
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 36 0.11
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.15
SB_39016| Best HMM Match : Extensin_2 (HMM E-Value=0.53) 35 0.25
SB_33307| Best HMM Match : NAF1 (HMM E-Value=1.5e-18) 35 0.25
SB_24992| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.25
SB_744| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.34
SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.45
SB_51883| Best HMM Match : Extensin_2 (HMM E-Value=1.3) 33 0.59
SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.78
SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.0
SB_48142| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_28909| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_58702| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.059) 32 1.8
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0) 32 1.8
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 32 1.8
SB_12332| Best HMM Match : PI-PLC-X (HMM E-Value=0) 32 1.8
SB_38471| Best HMM Match : Krr1 (HMM E-Value=4.7) 31 2.4
SB_36727| Best HMM Match : CS (HMM E-Value=0.0013) 31 2.4
SB_19476| Best HMM Match : Extensin_2 (HMM E-Value=0.014) 31 2.4
SB_46974| Best HMM Match : TPR_1 (HMM E-Value=1.5e-10) 31 2.4
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 31 2.4
SB_8283| Best HMM Match : Aerolysin (HMM E-Value=2.5e-05) 31 3.1
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 31 3.1
SB_51904| Best HMM Match : CH (HMM E-Value=0.0058) 31 3.1
SB_29375| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_21738| Best HMM Match : YTH (HMM E-Value=3.9e-06) 31 3.1
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_39622| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=5.3) 31 4.2
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.2
SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9) 31 4.2
SB_29730| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.2
SB_59380| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.5
SB_48656| Best HMM Match : Extensin_2 (HMM E-Value=0.0009) 30 5.5
SB_20164| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.5
SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.5
SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051) 30 5.5
SB_25763| Best HMM Match : MgtE_N (HMM E-Value=1.9) 30 5.5
SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015) 30 5.5
SB_49841| Best HMM Match : Extensin_2 (HMM E-Value=0.29) 30 7.3
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 30 7.3
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 30 7.3
SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19) 30 7.3
SB_28593| Best HMM Match : CUB (HMM E-Value=1.3e-14) 30 7.3
SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.3
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.3
SB_1181| Best HMM Match : DUF1604 (HMM E-Value=0) 29 9.6
SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 29 9.6
SB_36082| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08) 29 9.6
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
SB_8102| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 80.2 bits (189), Expect = 5e-15
Identities = 33/103 (32%), Positives = 59/103 (57%)
Query: 158 PKVNPFVMRHSANGNLEYLDPESVPYLGYLPQDVQDKDALQLYHPEDLEYLQQVYEVIVK 217
P V F+ RHS +G ++D LGY P+D+ + +HP+DLE++ + Y+ ++K
Sbjct: 242 PTVTEFISRHSLDGKFTFVDQRVTEVLGYQPRDMLGQLCYDFFHPDDLEHMMESYDQVMK 301
Query: 218 DGGMPRSKTYRMMTQNGDYIKIETEWSSFINPWSKKLEFVIGK 260
G S YR ++ GD++ + T SF NP++ + E++ G+
Sbjct: 302 LKGQTLSVRYRFRSKTGDWVWLRTSCFSFQNPYTDEAEYIAGE 344
>SB_28816| Best HMM Match : PAS (HMM E-Value=0.0047)
Length = 405
Score = 77.4 bits (182), Expect = 4e-14
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 152 TSFEILPKVNPFVMRHSANGNLEYLDPESVPYLGYLPQDVQDKDALQLYHPEDLEYLQQV 211
T F F RHS++G Y+D V GYLPQ+V +HPEDLE + Q
Sbjct: 66 TDFSRPDVAKQFTSRHSSDGKFIYVDQRIVSICGYLPQEVIGTSGYDYFHPEDLEIVAQS 125
Query: 212 YEVIVKDGGMPRSKTYRMMTQNGDYIKIETEWSSFINPWSKKLEFVI 258
++ ++ G +YR + ++G YI + T + F NPW+K++EF++
Sbjct: 126 HKSALQ--GETAVSSYRFLCKSGHYIPLRTRSTLFRNPWTKEIEFLV 170
>SB_27525| Best HMM Match : PAS (HMM E-Value=0.99)
Length = 448
Score = 50.8 bits (116), Expect = 4e-06
Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 126 FKNISDEEGNV----IYLVIQATPFFSAFKTSFEILPKVNPFVMRHSANGNLEYLDPESV 181
+K I ++EG ++LV A P F T+FE+ F RH + D
Sbjct: 3 YKTIINKEGQEQKVPLFLVAIAVPLM--FATTFEVPLDRGTFTSRHMLDMKFLQCDDRVS 60
Query: 182 PYLGYLPQDVQDKDALQLYHPEDLEYLQQVYEVIVKDGGMPRSKTYRMMTQNGDYIKIET 241
LGY +++ K +H DL+ + +++++ G SK YR M + G ++ ++T
Sbjct: 61 SLLGYTREEMIGKSWYSFHHAADLDNVLNTHKMLLTK-GQSVSKYYRFMVRGGGWVWLQT 119
Query: 242 EWSSFINPWSKKLEFVIGKHYIIEGPEN 269
+ + + + + +FV +Y++ G ++
Sbjct: 120 KANVVYDSKTCQPQFVFCINYVLGGKQD 147
>SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 163 FVMRHSANGNLEYLDPESVPYLGYLPQDVQDKDALQLYHPEDLEYLQQVYEVIVKDGGMP 222
F R + N +LD + +GY+ ++ Q HP DLE + + ++++V G +
Sbjct: 256 FTARLTLNWKFTHLDQRGLSVIGYMSNELVGSSLYQNIHPNDLENITRYHKILVYKGRV- 314
Query: 223 RSKTYRMMTQNGDYIKIETEWSSFINPWSKKLEFVI 258
+ YR +T+ Y+ I + N W+ + EF+I
Sbjct: 315 NTCYYRFLTKGQAYLWIRSCCYISYNQWNSRPEFII 350
Score = 29.9 bits (64), Expect = 7.3
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 145 PFFSAFKTSFEILPKVNPFVMRHSANGNLEYLDPESVPYLGYLPQDVQDKDALQLYHPED 204
PF S + I+ ++ F+M ++G++ ++ LGYLP+ + + + D
Sbjct: 89 PFVSDPELCQLIIEAMDGFIMSIDSSGSISFVSDNITSQLGYLPEKIINTRLSEYLESRD 148
Query: 205 LE----YLQQVYE 213
E LQ++YE
Sbjct: 149 CEAMDVRLQRLYE 161
>SB_33294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 983
Score = 46.0 bits (104), Expect = 1e-04
Identities = 28/118 (23%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 155 EILPKVNPFVMRHSANGNLEYLDPESVPYLGYLPQDVQDKDALQLYHPEDLEYLQQVYEV 214
E+ + N FV R + + + Y + ++ Y +D+ A YH D+ +Q +
Sbjct: 210 ELPLECNMFVSRVNMDLKIVYCEGRIHKFMDYFAKDIVGISAYDFYHAGDVAVIQGHH-- 267
Query: 215 IVKDGGMPRSKTYRMMTQNGDYIKIETEWSSFINPWSKKLEFVIGKHYIIEGPENPDV 272
K G +K YR M +NG ++ ++T+ S +P + +L+ ++ +YI+ E+ +
Sbjct: 268 -AKSKGQIMTKYYRWMNKNGGWVWMQTKCSLIPHPSNPELKQMLCLNYILSEVEHRSI 324
>SB_25662| Best HMM Match : HLH (HMM E-Value=2.3e-14)
Length = 468
Score = 43.2 bits (97), Expect = 7e-04
Identities = 48/215 (22%), Positives = 88/215 (40%), Gaps = 15/215 (6%)
Query: 11 DKVEDGFSCVISMHDGIVMYTTSSLTATLGFPKDMWIGRSFIDFVHPRDRSTFASQITSG 70
D+ +GF +S + G V + + ++ G ++ IG++F+D +HP DR+ ++++
Sbjct: 219 DECMNGFLFALSSN-GAVTFISRNVFQLFGHKQEEVIGKNFLDLIHPDDRNLVFNKLSED 277
Query: 71 ---LAVPKTANGTQEKAQSPGNS--------GSTMVCRIRRYRGLSTGFGVKERVVTFMP 119
+ V A+ Q + P G C I G S + E
Sbjct: 278 PEPVIVHIDASDFQPSKRLPKKHTFDIQMSFGKDGYCPIH-VCGYSNCWESSESP-NAKN 335
Query: 120 FLLKFTFKNISDEEGNVIYLVIQATPFFSAFKTSFEILPKVN-PFVMRHSANGNLEYLDP 178
L + K S+ G +LV + ++ N F RH+ +G Y+DP
Sbjct: 336 NLKVVSSKKSSEVPGITNFLVAVGLLSSPDYHRLSDLNESCNVEFNARHTMDGKFLYVDP 395
Query: 179 ESVPYLGYLPQDVQDKDALQLYHPEDLEYLQQVYE 213
+S+ G+ P ++ H EDL+ L ++E
Sbjct: 396 QSIRLTGFWPSELLGTSLYTYVHMEDLQMLGALHE 430
Score = 30.7 bits (66), Expect = 4.2
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 155 EILPK-VNPFVMRHSANGNLEYLDPESVPYLGYLPQDVQDKDALQLYHPED 204
EIL + +N F+ S+NG + ++ G+ ++V K+ L L HP+D
Sbjct: 216 EILDECMNGFLFALSSNGAVTFISRNVFQLFGHKQEEVIGKNFLDLIHPDD 266
>SB_27523| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-09)
Length = 666
Score = 38.3 bits (85), Expect = 0.021
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 11 DKVEDGFSCVISMHDGIVMYTTSSLTATLGFPKDMWIGRSFIDFVHPRDRSTFASQI 67
DK DGF VI+ DG +Y + ++T LG + G S +VHP D A+Q+
Sbjct: 542 DKALDGFVYVIAQ-DGQCLYISENVTYYLGLSQIEVTGNSLYKYVHPCDHEELANQL 597
>SB_3546| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-29)
Length = 447
Score = 38.3 bits (85), Expect = 0.021
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 593 PPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLY-GQPIYGQPMY 651
PP G PLY+TP P P + N Q L++ P PP + GQP Y P +
Sbjct: 333 PPFNGQ-PLYHTPPFNGQP-PYNTPPFNGQPLYHTPPFNGQPPYNTPPFNGQPSYNTPPF 390
Query: 652 SSPFVYSPMNPHTNYPMQQTTP 673
+ Y+ P P+ T P
Sbjct: 391 NGQPPYN-TPPFNGQPLSHTPP 411
Score = 35.5 bits (78), Expect = 0.15
Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 5/94 (5%)
Query: 593 PPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLY-GQPIYGQPMY 651
PP G P Y TP P P + N Q L++ P PP + GQP+Y P +
Sbjct: 311 PPFNGQPP-YNTPPFNGQP-PYYTPPFNGQPLYHTPPFNGQPPYNTPPFNGQPLYHTPPF 368
Query: 652 SS--PFVYSPMNPHTNYPMQQTTPQPNAQFTPTN 683
+ P+ P N +Y QP P N
Sbjct: 369 NGQPPYNTPPFNGQPSYNTPPFNGQPPYNTPPFN 402
Score = 31.5 bits (68), Expect = 2.4
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 593 PPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLY-GQPIYGQPMY 651
PP G PLY+TP P P + N Q +N P PP + GQP+ P +
Sbjct: 355 PPFNGQ-PLYHTPPFNGQP-PYNTPPFNGQPSYNTPPFNGQPPYNTPPFNGQPLSHTPPF 412
Query: 652 S 652
S
Sbjct: 413 S 413
Score = 30.7 bits (66), Expect = 4.2
Identities = 25/87 (28%), Positives = 32/87 (36%), Gaps = 4/87 (4%)
Query: 600 PLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLY-GQPIYGQPMYSS--PFV 656
P Y P T P P + N Q +N P PP + GQP+Y P ++ P+
Sbjct: 295 PPYNAPPFTGQP-PYNAPPFNGQPPYNTPPFNGQPPYYTPPFNGQPLYHTPPFNGQPPYN 353
Query: 657 YSPMNPHTNYPMQQTTPQPNAQFTPTN 683
P N Y QP P N
Sbjct: 354 TPPFNGQPLYHTPPFNGQPPYNTPPFN 380
>SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034)
Length = 671
Score = 37.9 bits (84), Expect = 0.027
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 607 ATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCV-LYGQPIYGQPMYSSPFVYSPMNPHTN 665
+T++ ST E+AN Q L N+P + P + + + GQ + P S P + NP
Sbjct: 462 STLSEAASTLESAN-QWLRNSPSKPDTPTDRTLEVTGQWLKASPCTSDPLCFGDRNPDVF 520
Query: 666 YPMQQTTPQPN 676
Y + T P+P+
Sbjct: 521 YKSESTVPRPS 531
>SB_15627| Best HMM Match : AMPKBI (HMM E-Value=3e-36)
Length = 255
Score = 35.9 bits (79), Expect = 0.11
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 155 EILPK-VNPFVMRHSANGNLEYLDPESVPYLGYLPQDVQDKDALQLYHPEDLEYLQQVYE 213
+I+P V P ++R N ++ + P + ++ L +D+ D D L D L +Y
Sbjct: 165 QIIPSHVTPVIVRDGTNASVPPILPPHLLHV-ILNKDIVDHDDPSLLPEPDYVSLNHLYA 223
Query: 214 VIVKDGGMPRSKTYR 228
+ +KDG M S T+R
Sbjct: 224 LSIKDGVMTLSATFR 238
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 35.9 bits (79), Expect = 0.11
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 9/92 (9%)
Query: 589 ISPVPPMAGMLPLYYTPMATMAPVPS--TSEAANHQNLHNNPQQYAPPPMQCVLYGQPIY 646
I P P +P TP ++ P P+ TS + +P Y+ P + Y P Y
Sbjct: 263 IPPTPTPHTSIPPTPTPHTSIPPTPTPHTSIPPTPHPTYKHPS-YSYPTYKHPSYSYPSY 321
Query: 647 GQPMYSSPFVYS---PMNPHTNYPMQQTTPQP 675
P Y S + + P+ PHT+ P TP P
Sbjct: 322 KHPSYPSSHIQASLLPLIPHTSIP---PTPHP 350
Score = 34.7 bits (76), Expect = 0.25
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 6/80 (7%)
Query: 589 ISPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAP-PPMQCVLYGQPIYG 647
I P P +P TP ++ P P+ H ++ P + PP Y P Y
Sbjct: 253 IPPTPTPHTSIPPTPTPHTSIPPTPTP-----HTSIPPTPTPHTSIPPTPHPTYKHPSYS 307
Query: 648 QPMYSSPFVYSPMNPHTNYP 667
P Y P P H +YP
Sbjct: 308 YPTYKHPSYSYPSYKHPSYP 327
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 35.5 bits (78), Expect = 0.15
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 296 RENIVKLMNE--ALTKPAEVAKQQMSKRCQDLASFMESLMEEPPKNDEELRLEIQDPDHS 353
RE I +L N L + E ++Q+ + + L+ S EE ++R E+Q ++
Sbjct: 146 REEIQELRNSYRGLERENEQLRKQVMELNEQLSEAANSSTEESNSKLTDVRKELQGANNR 205
Query: 354 YYERDSVMLGGISPHHDYNDSKSSTETPL 382
E +SV+ G++ +D N S +E L
Sbjct: 206 VKELESVIADGVNERNDLNFKLSQSERQL 234
>SB_39016| Best HMM Match : Extensin_2 (HMM E-Value=0.53)
Length = 287
Score = 34.7 bits (76), Expect = 0.25
Identities = 38/183 (20%), Positives = 60/183 (32%), Gaps = 6/183 (3%)
Query: 508 KKPHGVKRASKHIETETVSHKYHCPSPRASRPRQTTSAAPVQXXXXXXXXXXXXXWPPST 567
+KP + ++ I+ S++Y +P A+ + + PS
Sbjct: 26 RKPRQQRSHAEWIDDTFGSYQYPQAAPVATAYNAAARSTAPSSSNTGTAAAPAQAFAPSA 85
Query: 568 NAAGNMNTFILGVGMAPQMSLISPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNN 627
A + AP + +PVP A P P A AP P S + + +
Sbjct: 86 PLAAPAQ---VAAAPAPAAAAPAPVPAAAAPAPAPAAPSAAAAPAPVRSVPSTSPSSVRS 142
Query: 628 PQQYAPPPMQCVLYGQPIYG-QPMYSSPFVYSPMNPHTNYPMQQTTPQPNA--QFTPTNT 684
Y P Q Y P + + YSP P P T A FT +
Sbjct: 143 ATPYYPQTQQQQSSVSSSYSYYPRAAPSYYYSPPAPAAYAPSTATATVAAAGGVFTESTP 202
Query: 685 MNP 687
++P
Sbjct: 203 LHP 205
>SB_33307| Best HMM Match : NAF1 (HMM E-Value=1.5e-18)
Length = 1085
Score = 34.7 bits (76), Expect = 0.25
Identities = 26/88 (29%), Positives = 30/88 (34%), Gaps = 9/88 (10%)
Query: 600 PLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPP---MQCVLYGQPIY---GQPMYSS 653
P +YTP P H PQ YAPPP Y P + G P
Sbjct: 945 PRHYTP-PPQTPPNQQDIGPRHYAPPRAPQSYAPPPPAHFMGARYPAPYHRAPGHPFDQG 1003
Query: 654 PFVYSP--MNPHTNYPMQQTTPQPNAQF 679
PF+ P P +YP P P F
Sbjct: 1004 PFLMEPGRFPPPVSYPSGHRVPPPPRPF 1031
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 644 PIYGQPMYSSPFVYSPMNPHTNYPMQQTTPQPNA 677
P GQP++ +P + +P P ++ M+Q P P A
Sbjct: 888 PPPGQPVWQNPHLRTPFTPPSHQDMRQYAPPPQA 921
>SB_24992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 34.7 bits (76), Expect = 0.25
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 183 YLGYLPQDVQDKDALQLYHPEDLEYLQQVYEVIVKDGGMPRSKTYRMMTQNGDY----IK 238
YL P D+ DK L+ ++ Y ++ + +GG+ + R T++ Y IK
Sbjct: 278 YLRCYPDDITDKSTLKTTLQTNVAYRGLMHPMTKTEGGLVPTFKSRYSTEDIPYGLVVIK 337
Query: 239 IETEWSSFINPWSKK----LEFVIGKHYIIEGP-ENPDVFQSQDPEKH 281
E P S K ++ +GK Y+++G + DV +++ P+K+
Sbjct: 338 GIAELFGVPTPQSDKVLLWMQEKLGKEYLVDGKLQGHDVMETRAPQKY 385
>SB_744| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 34.3 bits (75), Expect = 0.34
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 160 VNPFVMRHSANGNLEYLDPESVPYLGYLPQDVQDKDALQLYHPEDLEYLQQ 210
+ F + + GN+ Y+ S YLGY + +D L HP+D+E ++
Sbjct: 2 IGGFFIVLTEGGNVFYISENSSSYLGYSQAHMMHQDFLTYVHPDDVESFKE 52
>SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 33.9 bits (74), Expect = 0.45
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Query: 593 PPMAGMLPLYYTPMATMAPVPSTSEAANHQNLH--NNPQQYAPPPMQCVLYGQPIYGQPM 650
PP G + L Y A +P P + + Q + ++ QQ PP + Y
Sbjct: 204 PPNPGRIQLVYPGSAQTSPYPMPTSSGPFQGSYTPSSTQQNYPPSLSQQSYAPATQQAYP 263
Query: 651 YSSPFVYSPMNPHTNYPMQQTTPQPNAQ 678
S Y PM+ + PM Q + P +Q
Sbjct: 264 LESQQNYPPMSQQSYSPMSQQSFPPTSQ 291
>SB_51883| Best HMM Match : Extensin_2 (HMM E-Value=1.3)
Length = 295
Score = 33.5 bits (73), Expect = 0.59
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 11/85 (12%)
Query: 590 SPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQP 649
SPVPP P+ T + T P ++ + + Q PP QC +P
Sbjct: 60 SPVPPNHQYTPITSTDLITSTPQSPVPPNHQYRPITSTAQSPVPPNHQC---------RP 110
Query: 650 MYSSPFVYSPMNPHTNYPMQQTTPQ 674
+ S+P SP++P+ Y +TPQ
Sbjct: 111 ITSTP--QSPVHPNHQYRPITSTPQ 133
>SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 33.1 bits (72), Expect = 0.78
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Query: 445 TKHNDEMEKELINMHRESRSNSKGERDKTSNETRQKKKEHLARCKASFHPTATSTTPVDK 504
TK+N + KE + E++ +K +DKT + K+ A + P T+ +
Sbjct: 499 TKNNKDKTKENKDKTNENKDKTKENKDKTKENKNKTKENKTANRPLTPLPATTANRLLPP 558
Query: 505 EVYKKPHGVKRASKHIETETVSHKYHCP--SPRASRPRQTTSAAP 547
E + +H E E V ++ +P + P T++ P
Sbjct: 559 ETSNDGNFDTLHEEHFEKEVVRKRWKVKRRNPMSVMPLPLTASGP 603
Score = 31.5 bits (68), Expect = 2.4
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 445 TKHNDEMEKELINMHRESRSNSKGERDKTSNETRQKKKEHLARCKASFHPTATSTTPVDK 504
TK N + KE + +E++ +K +DKT E + K KE+ + K + T + K
Sbjct: 450 TKENKDKTKENKDKTKENKDKTKENKDKT-KENKDKTKENKDKTKENKDKTKNNKDKT-K 507
Query: 505 EVYKKPHGVKRASKHIETETVSHKYHCPSPR-ASRP 539
E K + K +K + +T +K + A+RP
Sbjct: 508 ENKDKTNENKDKTKENKDKTKENKNKTKENKTANRP 543
Score = 31.1 bits (67), Expect = 3.1
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 445 TKHNDEMEKELINMHRESRSNSKGERDKTSNETRQKKKEHLARCKASFHPTATSTTPVDK 504
TK+N + KE + +E++ +K +DKT E + K KE+ + K + T + K
Sbjct: 401 TKNNKDKTKENKDKTKENKDKTKNNKDKT-KENKDKTKENKDKTKENKDKTKENKDKT-K 458
Query: 505 EVYKKPHGVKRASKHIETETVSHK 528
E K K +K + +T +K
Sbjct: 459 ENKDKTKENKDKTKENKDKTKENK 482
>SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 32.7 bits (71), Expect = 1.0
Identities = 31/121 (25%), Positives = 45/121 (37%), Gaps = 10/121 (8%)
Query: 583 APQMSLISPVPPMAGMLPLYYTPMATMA--PVPS-TSEAANHQNLHNNPQQYAPPPMQCV 639
AP +S I P P L +TP A A P PS T E++ + P YA + V
Sbjct: 714 APTVSSIDPSPTFTDEPTLEHTPAAAAATEPAPSITEESSADDKVDKEPVTYA----ESV 769
Query: 640 LYGQPIYG---QPMYSSPFVYSPMNPHTNYPMQQTTPQPNAQFTPTNTMNPLCLANSNYE 696
+ +P QPM F P P+ P + + PL A + +
Sbjct: 770 VSEEPSLAASIQPMVEPAFPAEEPAPQVPPPVSHEVPTAGGPVSDQDEWPPLMPAGTTVD 829
Query: 697 E 697
+
Sbjct: 830 Q 830
>SB_48142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 32.3 bits (70), Expect = 1.4
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 593 PPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQY--APPPMQCVLYGQPIYGQPM 650
P +AG++P + P + P P ++H H PQ+ AP + V G P+Y P+
Sbjct: 260 PEVAGLVPPHQ-PAPGIPPQPMNEGNSDH---HGRPQRLRQAPQRLTYVNQGTPVYMNPI 315
Query: 651 --YS-SPFVY--SPMNPHTNYPMQ 669
Y P++Y + P+ NY Q
Sbjct: 316 APYEMQPWMYRYQQLYPYNNYNQQ 339
>SB_28909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 32.3 bits (70), Expect = 1.4
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 601 LYYTPMATMAPVPSTSEAANHQNLHNNPQQ-----YAPPPM-QCVLYGQP-IYGQPMYSS 653
LY P T + S + + +L++NPQ Y+ P + + L+ P + +YS+
Sbjct: 458 LYSNPQVTRTSLYSNPQVTRN-SLYSNPQVTRNSLYSNPQVTRNSLFSNPQVTRNSLYSN 516
Query: 654 PFVYSPMNPHTNYPMQQTTPQPNAQFTPTNT-MNPLCLANSNY 695
P + +P + ++N + + + PN Q TPT+ NP N Y
Sbjct: 517 PQI-TPTSLYSNPQVTRISLYPNPQVTPTSLYSNPQVTRNFLY 558
>SB_58702| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.059)
Length = 765
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 652 SSPFVYSPMNPHTNYP---MQQTTPQPNAQFTPTNT 684
SSP + PHT P QQ PQP Q TPT++
Sbjct: 427 SSPSAFQVAKPHTPTPPPPTQQPAPQPTMQTTPTHS 462
>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 2726
Score = 31.9 bits (69), Expect = 1.8
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 611 PVPS--TSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPMYSSPFVYSPMNPHTNYPM 668
P PS +S Q +++P Y P ++GQ G P ++S + P+N + M
Sbjct: 1005 PSPSLESSTLQTSQLSNDSPNSYTAPQPSRSIFGQ---GIPSFNSVNMNPPLNDGASVSM 1061
Query: 669 QQTTPQPNAQFTPTNTMNPLCLANSNYE 696
Q QP TP + NP N E
Sbjct: 1062 QLNQNQPLFSLTPEQS-NPGSTIEGNKE 1088
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 31.9 bits (69), Expect = 1.8
Identities = 36/159 (22%), Positives = 44/159 (27%), Gaps = 9/159 (5%)
Query: 532 PSPRASRPRQTTSAAPVQXX--XXXXXXXXXXXWPPSTNAAGNMNTFILGVGMAPQM-SL 588
PS + R TT P PP+T T P +
Sbjct: 35 PSQQLPHNRTTTPTTPTTTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTT 94
Query: 589 ISPVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQ 648
+P P TP AT P T+ P PP +P
Sbjct: 95 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPT--KPTTTT 152
Query: 649 PMYSSPFVYSPMNPHTNYPMQQTTPQPNAQFTPTNTMNP 687
P P +P P T P TTP + TP T P
Sbjct: 153 P----PATTTPTKPTTTTPPATTTPTKSTTTTPPATTTP 187
>SB_12332| Best HMM Match : PI-PLC-X (HMM E-Value=0)
Length = 1038
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 279 EKHTKLCDEQIKKSMVFRENIVKLMNEALTKPAEVAKQQMSKRCQDLASFMESLMEEPPK 338
++H K+ D+ +K+ RE I+ L+ L + +AKQQ+ + ++L M E+ K
Sbjct: 889 QEHNKMVDD-LKRD--HREQIITLLRRQLAEQFSLAKQQLEPQYEELDRVMILAHEDQIK 945
Query: 339 NDEEL 343
+EL
Sbjct: 946 QMDEL 950
>SB_38471| Best HMM Match : Krr1 (HMM E-Value=4.7)
Length = 536
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 448 NDEMEKELINMHRESRSNSKGERDKTSNETRQKKKEH 484
N E + N R+ RS +K RDK +N RQK+ E+
Sbjct: 347 NKEFRDKENNAKRQKRSENKEFRDKENNAKRQKRSEN 383
>SB_36727| Best HMM Match : CS (HMM E-Value=0.0013)
Length = 272
Score = 31.5 bits (68), Expect = 2.4
Identities = 20/98 (20%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 441 EFLLTKHNDEMEKELINMHRESRSNSKGERDKTSNETRQKKKEHLARCK-ASFHPTATST 499
EF+ K + +EK + E++ KG R++ RQ+ K ++ + S +
Sbjct: 95 EFMQRKREEAIEKAHLRADEEAKKREKGRREQGRYALRQQMKVNICIVQMLSKYHALRQQ 154
Query: 500 TPVDKEVYKKPHGVKRASKHIETETVSHKYHCPSPRAS 537
+++E ++ +K + TE + + S RA+
Sbjct: 155 MKMEEEERQRVADIKEEERRKATEAIENWKETQSDRAT 192
>SB_19476| Best HMM Match : Extensin_2 (HMM E-Value=0.014)
Length = 366
Score = 31.5 bits (68), Expect = 2.4
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Query: 590 SPVPPM--AGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYG 647
+PVPP A P+ A APVPS +A +YAP P Q P+
Sbjct: 83 APVPPQRDAKYAPVSPQRDAGYAPVPSQRDAGYAPVPPQRDAKYAPVPPQRDAKYAPVPS 142
Query: 648 QPMYSSPFVYSPMNPHTNYPMQQTTPQPNAQFTP 681
Q Y+P+ P + PQ +A++ P
Sbjct: 143 Q----RDAKYAPVPPQRDAGYAPVPPQRDAKYAP 172
Score = 30.7 bits (66), Expect = 4.2
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 590 SPVPPM--AGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAP-PPMQCVLYGQPIY 646
+PVPP A P+ A APVP +A +YAP PP + V Y P+
Sbjct: 127 APVPPQRDAKYAPVPSQRDAKYAPVPPQRDAGYAPVPPQRDAKYAPVPPQRDVGYA-PV- 184
Query: 647 GQPMYSSPFVYSPMNPHTNYPMQQTTPQPNAQFTP 681
P + Y+P+ P + PQ +A++ P
Sbjct: 185 -PPQRDAG--YAPVPPQRDAKYAPVPPQRDAEYAP 216
>SB_46974| Best HMM Match : TPR_1 (HMM E-Value=1.5e-10)
Length = 466
Score = 31.5 bits (68), Expect = 2.4
Identities = 20/98 (20%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 441 EFLLTKHNDEMEKELINMHRESRSNSKGERDKTSNETRQKKKEHLARCK-ASFHPTATST 499
EF+ K + +EK + E++ KG R++ RQ+ K ++ + S +
Sbjct: 95 EFMQRKREEAIEKAHLRADEEAKKREKGRREQGRYALRQQMKVNICIVQMLSKYHALRQQ 154
Query: 500 TPVDKEVYKKPHGVKRASKHIETETVSHKYHCPSPRAS 537
+++E ++ +K + TE + + S RA+
Sbjct: 155 MKMEEEERQRVADIKEEERRKATEAIENWKETQSDRAT 192
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 31.5 bits (68), Expect = 2.4
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 277 DPEKHTKLCDEQIKKSMVFRENIVKLMNEALTKPAEVAKQQMSKRCQDLASFMESLMEEP 336
D EK K+ + +K E + EA K ++ + ++SK+ +DLA ++ L +
Sbjct: 1444 DHEKREKVLQDGAEKDRKGFEKEKEEFEEAFRKEKKIFQDELSKKDEDLAQKLQDLRTQL 1503
Query: 337 PKNDEELRLEIQ 348
E+ + E+Q
Sbjct: 1504 ENEMEKEKAELQ 1515
>SB_8283| Best HMM Match : Aerolysin (HMM E-Value=2.5e-05)
Length = 547
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 353 SYYERDSVMLGGISPHHDYNDSKSSTETPLSYNQLNYNETLQST 396
SY D+ G+ +++N KSST+T + N Y T+ ST
Sbjct: 278 SYTPPDATGGAGVKASYNFNYEKSSTQTDSTANTQKYTSTVTST 321
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 446 KHNDEMEKELINMHRESRSNSKGERDKTSNETRQKKK---EHLARCKASFHPTATSTTPV 502
K + EKEL + ++ + + + +K E K+K E AR KA
Sbjct: 227 KEQERKEKELAELEKKRQEERRRQEEKRRAEEEAKRKAEEEKAAREKAEMEEKLRRLKLQ 286
Query: 503 DKEVYKKPHGVKRASKHIETE 523
+KE +K K+ + +E E
Sbjct: 287 EKEEKRKLEAEKKEKERVERE 307
>SB_51904| Best HMM Match : CH (HMM E-Value=0.0058)
Length = 1187
Score = 31.1 bits (67), Expect = 3.1
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 271 DVFQSQDPEKHT--KLCDEQIKKSMVFRENIV----KLMNEALTKPAEVA-----KQQMS 319
++ +S D E++ +L DE K RE K M+E K E+A K+++
Sbjct: 908 EILRSVDDERNRVQRLLDEDEAKRKRQREEEEAKRKKKMDEEKAKKKELAAWEDAKRKLK 967
Query: 320 KRCQDLASFMESLMEEPPKNDEELR 344
R L ++SL EPP+N E+LR
Sbjct: 968 PRIARLDVRLKSLKREPPQNSEDLR 992
>SB_29375| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 637
Score = 31.1 bits (67), Expect = 3.1
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 599 LPLYYTPMATMAPVPST-SEAANHQNLHNNPQQYAPPPMQCVLY----GQPIYGQPMYSS 653
+P+ +TP+ + APV T E+A + + + P +Y P V Y P+ P+ S+
Sbjct: 75 VPVKHTPVES-APVKYTPMESAPYTPVESKPVKYTPVQSALVKYTPVESAPVKYTPVESA 133
Query: 654 PFVYSPMNPHTNYPMQQTTPQPN-AQFTPTNT 684
P Y+P+ + P++ T Q ++TP +
Sbjct: 134 PVKYTPVE---SKPVKYTPVQSALVKYTPVES 162
>SB_21738| Best HMM Match : YTH (HMM E-Value=3.9e-06)
Length = 183
Score = 31.1 bits (67), Expect = 3.1
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Query: 589 ISPVPPMAGMLPLYYTPMATMAPVPSTSEAA-NHQNL---HNNPQQYAPPPMQC-VLYG- 642
I PV + P Y P A P+P A + Q L + P AP P++ LYG
Sbjct: 83 IGPVTQQPAVYPTVYAPHAASMPIPVPVPAQHSRQTLLQAYPRPAMTAPQPIRSQPLYGV 142
Query: 643 QPIYGQPMYSSPFVYSPMNPHT 664
P Y + +PM P +
Sbjct: 143 HPHMRNSRYPGHVIPAPMQPQS 164
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 271 DVFQSQDPEKHTKLCDEQIKKSMVFRENIVKLMNEALTKPAEVAKQQMSKRCQDLASFME 330
+VF+ + E E++KK+ + ++I KL + K E+AK ++ + S +
Sbjct: 961 EVFELEQIEHEASSVAEELKKTSLIEQSIDKLERDLRLKDEELAKVTQNRVAFEANSLAQ 1020
Query: 331 SLMEEPPKNDEELRLE 346
L E K E+R+E
Sbjct: 1021 QLKE---KQAYEVRIE 1033
>SB_39622| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=5.3)
Length = 107
Score = 30.7 bits (66), Expect = 4.2
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 627 NPQQYAPPPMQCVLYGQPIYGQPMYSSPFVYSPMNPHTNYPMQQTTPQP 675
NPQQ A P + + P Y QP S Y P P +Y Q ++ QP
Sbjct: 21 NPQQIAAPAASAMSHATPSYQQPQMPS---YQPQMP--SYQPQMSSYQP 64
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 30.7 bits (66), Expect = 4.2
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 626 NNPQQYAPPPMQCVLYGQPIYGQPMYSSPFVYSPMNPHTNYPMQQTTPQPNAQ 678
NNP+ + PP Q +P+ P S+ P +Y +QQTTP +Q
Sbjct: 88 NNPRPHTPPSCQSNT-PRPLTPPPRQSNTTQPPAYPPRQSYALQQTTPLHTSQ 139
>SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9)
Length = 496
Score = 30.7 bits (66), Expect = 4.2
Identities = 34/170 (20%), Positives = 60/170 (35%), Gaps = 9/170 (5%)
Query: 450 EMEKELINMHRESRSNSKGERDKTSNETRQKKKEHLARCKASFHPTATSTTPVDKEVYKK 509
E EKE ++ + GE + ++ E +K K+ K+ T + + +
Sbjct: 16 EKEKEKDKKGKKKKGEQNGENNDSAKEESKKNKKEAKEAKSK---TTLTRKNISNALGPP 72
Query: 510 PHGVKRASKHIETETVSHKYHCPSPRASRPRQTTSAAPVQXXXXXXXXXXXXXWPPSTNA 569
P R E E S P P ++ R+ S + +Q P A
Sbjct: 73 PDPPSRPGGGKEEEPTS-----PPPMSNLLRELGSTSLMQRAQSLDESLSSKQGTPPRKA 127
Query: 570 AGNMNTFILGVGMAPQMSLISPVP-PMAGMLPLYYTPMATMAPVPSTSEA 618
+ PQ P+P P +PL TP ++ +PS +++
Sbjct: 128 LHPPKMQLPLTSSDPQTRPAMPLPSPSRSEMPLPPTPSSSSESLPSGTKS 177
>SB_29730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4275
Score = 30.7 bits (66), Expect = 4.2
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 6/99 (6%)
Query: 590 SPVPPM--AGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYG 647
+PVPP AG P+ A APVP +A +YAP P Q P+
Sbjct: 106 APVPPQRDAGYAPVPPQRDAGYAPVPPQRDAGYAPVPPQRDAKYAPVPPQRDAGYAPV-- 163
Query: 648 QPMYSSPFVYSPMNPHTNYPMQQTTPQPNAQFTPTNTMN 686
P + Y+P+ P + PQ +A++ P N
Sbjct: 164 PPQRDAG--YAPVPPLRDVGYAPVPPQRDAKYAPELIQN 200
>SB_59380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1226
Score = 30.3 bits (65), Expect = 5.5
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 213 EVIVKDGGMPRSKTYRMMTQNGDYIKIETEWSSFINPWSKKLEFVI--GKHYIIEGPENP 270
E++V+ G+ +KTY Y+K+ +++S PWSK L + + + GPE
Sbjct: 1030 ELVVRLTGLTSNKTY--------YVKVRADYNSQYGPWSKVLTISLYEKNNGSLIGPEKS 1081
Query: 271 DVFQ-SQDPEKHTKLCDEQIKKSMV 294
+ S +P+ + D Q+K ++
Sbjct: 1082 TANETSPNPKASEEKEDFQVKLGII 1106
>SB_48656| Best HMM Match : Extensin_2 (HMM E-Value=0.0009)
Length = 392
Score = 30.3 bits (65), Expect = 5.5
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 5/93 (5%)
Query: 584 PQMSL--ISPVPPMAGMLPLYYTPMATM-APVPSTSEAANHQNLHNNPQQYAPPPMQCVL 640
PQ L ++P+P LP P+ AP+P +A Q PQQ+AP P Q
Sbjct: 187 PQAPLPQLAPLPKQQAPLPQQQAPLPQQQAPLPQ-QQAPLPQQQAPLPQQHAPLPQQQAP 245
Query: 641 YGQPIYGQPMYSSPFVYSPMNPHT-NYPMQQTT 672
Q P ++ +P+ T Y Q T
Sbjct: 246 LPQQKAPLPQQATTMYSAPLPTQTATYGYAQAT 278
>SB_20164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 30.3 bits (65), Expect = 5.5
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 172 NLEYLDPESVPYLGYLPQDVQDKDALQLYHPEDLEYLQQVYEVIVKDGGMPRSKTYRMMT 231
+LE +DPE L ++ ++ ++ L+++ D+E L +V +K GG + +
Sbjct: 136 DLETIDPEFYNSLVWVKENNIEECGLEMFFTVDMELLGKVTSHDLKPGG---TDIAVIEE 192
Query: 232 QNGDYIKIETEW 243
+YI + TEW
Sbjct: 193 NKEEYISLMTEW 204
>SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.3 bits (65), Expect = 5.5
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 453 KELINMHRESRSNSKGERDKTSNETRQKKKEHL 485
KELI R +G R K SNE Q+KK+ L
Sbjct: 522 KELIERRRRKMKEFEGYRQKKSNEFIQQKKQRL 554
>SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051)
Length = 421
Score = 30.3 bits (65), Expect = 5.5
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 3/79 (3%)
Query: 593 PPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPMYS 652
PP G P Y P P N+ PQ YAPPP P G P
Sbjct: 199 PPPGGYAPPPYVPQEGGGIPPQNHPLTNYPA--PPPQGYAPPP-GGYPGAPPAGGYPGAP 255
Query: 653 SPFVYSPMNPHTNYPMQQT 671
P Y P NYP ++
Sbjct: 256 PPGGYPGGPPPANYPASES 274
>SB_25763| Best HMM Match : MgtE_N (HMM E-Value=1.9)
Length = 483
Score = 30.3 bits (65), Expect = 5.5
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 173 LEYLDPESVPYLGYLPQDVQDKDALQLYHPEDLEYLQQV 211
LEY P+ + YL L Q + QL H + LEYLQQ+
Sbjct: 238 LEY--PQQLEYLQQLEHPQQLEHLQQLEHQQQLEYLQQL 274
>SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015)
Length = 592
Score = 30.3 bits (65), Expect = 5.5
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 568 NAAGNMNTFILGVGMAPQMSLISPVPPMAGM-LPLYYTPMATMAPVPSTSEAANHQNLHN 626
NAA + F++G G P S+ V +G+ P+ TP A PVP+ H N
Sbjct: 32 NAAKDFVGFLIGAGFIPADSVPDEVLAESGVGPPVASTPPAPQ-PVPNNMGPPPHVNQGP 90
Query: 627 NPQ--QYAPPP 635
P APPP
Sbjct: 91 PPNSANQAPPP 101
>SB_49841| Best HMM Match : Extensin_2 (HMM E-Value=0.29)
Length = 1841
Score = 29.9 bits (64), Expect = 7.3
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 580 VGMAPQMSL-ISPVPPMAGMLPLYYTPMATMAPV 612
VGM P + +PV PM GM PL P A + PV
Sbjct: 1757 VGMEPNPVVPYAPVQPMVGMEPLPVVPYAPVQPV 1790
Score = 29.5 bits (63), Expect = 9.6
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 578 LGVGMAP-QMSLISPVPPMAGMLPLYYTPMATMAPV 612
L VGM P + +PV PM GM PL P A + PV
Sbjct: 1449 LVVGMEPCPVVPYAPVQPMVGMEPLPVVPYAPVQPV 1484
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 29.9 bits (64), Expect = 7.3
Identities = 28/89 (31%), Positives = 32/89 (35%), Gaps = 10/89 (11%)
Query: 593 PPMAGMLPL---YYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQP 649
PP G P Y P A P P A P PPP GQ YG P
Sbjct: 38 PPAPGGYPPSGGYGYPPAGGYPPPQPGYAGGPPPPGIAPGIGGPPPS-----GQ--YGAP 90
Query: 650 MYSSPFVYSPMNPHTNYPMQQTTPQPNAQ 678
S P+ P + + Y PQP+AQ
Sbjct: 91 PTSQPYGAPPTSGYPGYQQHPPPPQPSAQ 119
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 436 HVRLTEFLLTKHNDEMEKELINMHRESRSNSKGERDKTSNETRQKKKEHL 485
H+R L+ + +ELI RE ++ S+ R + E +++KEHL
Sbjct: 2644 HLRQQVSLMRSKGNTQSEELIQQMRELQNQSEKYRFQKQREDCEREKEHL 2693
>SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19)
Length = 86
Score = 29.9 bits (64), Expect = 7.3
Identities = 19/67 (28%), Positives = 23/67 (34%)
Query: 604 TPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPMYSSPFVYSPMNPH 663
TP P N+ P PPP+ QP QP + P V P P
Sbjct: 19 TPKPPQPTPPKPDTPPPGTNIPTPPSPNTPPPVTQPPVTQPPVTQPPVTQPPVTQPPPPV 78
Query: 664 TNYPMQQ 670
T P Q+
Sbjct: 79 TQSPEQE 85
>SB_28593| Best HMM Match : CUB (HMM E-Value=1.3e-14)
Length = 327
Score = 29.9 bits (64), Expect = 7.3
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query: 633 PPPMQCVLYGQPIYGQPMYSSPFVYSPMNPHTNYPMQQTTP-QPNAQFTP 681
PPP+ V GQP+ P P Y P P T YP Q P QP Q P
Sbjct: 268 PPPV-AVQQGQPLVVPP----PGSY-PTQPQTGYPAQGGYPMQPQGQMPP 311
>SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 29.9 bits (64), Expect = 7.3
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 439 LTEFLLTKHNDEMEKELINMHRESRSNSKGERDKTSNETRQKKKEHLARCKASFHPTATS 498
L EF +K DE+ + +I+ H +S +++K E+D+ + ++ K + TA
Sbjct: 821 LEEF--SKMRDEIPEAIIDSHVKSATSAKTEKDQDEEDNSEQNKSVDEAMQVEEEKTAEQ 878
Query: 499 TTPVDKEVYKKPHGVKRASKH 519
+ K+P AS++
Sbjct: 879 PEAAPSKEEKEPETALGASEN 899
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 29.9 bits (64), Expect = 7.3
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 460 RESRSNSKGERDKTSNETRQKKKEHLARCKASFHPTATSTTPVDKEVYKKPHG 512
R SRS K ++K + + ++K H+A K H TAT T +E +G
Sbjct: 410 RHSRSEDKSLKEKGKSLSLEEKLRHIAEDKNEHH-TATDTKEAQEEAPVSDNG 461
>SB_1181| Best HMM Match : DUF1604 (HMM E-Value=0)
Length = 1035
Score = 29.5 bits (63), Expect = 9.6
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 438 RLTEFLLTKHNDEMEKELINMHRESRSNSKGERDKTSNETRQKKKEHLARCKASFHPTAT 497
R T + K N + ++E + ++ S S+GE D N +++ E + K S +
Sbjct: 952 RSTSRIDKKKNKKAQRE----YSDTSSGSEGESDSRDNRAKERASE---KSKLSDKSRTS 1004
Query: 498 STTPVDKEVYKKPHGVK 514
TP KE+ K + ++
Sbjct: 1005 ENTPDPKEIMNKLNNIR 1021
>SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 959
Score = 29.5 bits (63), Expect = 9.6
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 446 KHNDEMEKELINMHRESRSNSKGERDKTSNETRQKKKEHLARCKASFHPTATSTTPVDKE 505
K+N E K +E + + K + + +NET K+K + SF+PT+ + +D
Sbjct: 523 KNNSEKSKR-----QEDKKSPKKKLNSDNNETTPKRKLTNSASTQSFNPTSKKKSALDYC 577
Query: 506 VYKKP 510
+ KP
Sbjct: 578 ITHKP 582
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 29.5 bits (63), Expect = 9.6
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Query: 637 QCVLYGQPIYGQPMYSSPFVYSPMNP--HTNYPMQQTTPQPNAQFTPTNTMNPLCLANSN 694
Q +L+ P QP SP + P HT++P T P P FT C + SN
Sbjct: 460 QALLHSHPSPSQP---SPVSHPPAQALLHTSHPSPATHPSPKPCFTFLTLSTKPCFSPSN 516
>SB_36082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 29.5 bits (63), Expect = 9.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 469 ERDKTSNETRQKKKEHLARCKASFHPTATSTTPVDKEVYKKPHGV 513
ER KT E +E A+ SFHP A+S P + + +P G+
Sbjct: 27 ERAKTGEERADDSEEEFAK---SFHPKASSNKPSNTQPPHEPTGL 68
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.5 bits (63), Expect = 9.6
Identities = 35/136 (25%), Positives = 48/136 (35%), Gaps = 13/136 (9%)
Query: 495 TATSTTPVDKEVYKKPHGVKRASKHIETETVSHKYHCPSPRASRPRQTTSA-----APVQ 549
T T V E K P + + ET +P A+ P +TT A AP
Sbjct: 4326 TMAPVTTVAPETTKAPESTEAPETTMVPETTVAPETTVTPEATVPPETTMAPESTEAPET 4385
Query: 550 XXXXXXXXXXXXXWPPSTNAAGNMNTFILGVGMAPQMSLI--SPVPPMAGMLP-LYYTPM 606
P T A T +AP+ +++ S + P M P + P
Sbjct: 4386 TMAPESTEAPETTMAPMTTVASE-TTKTPDTPVAPETNMVAESTLAPETTMTPEITVAPK 4444
Query: 607 ATMAP----VPSTSEA 618
TMAP P T+EA
Sbjct: 4445 TTMAPETTVSPETTEA 4460
>SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08)
Length = 1258
Score = 29.5 bits (63), Expect = 9.6
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 4/97 (4%)
Query: 587 SLISPVPPMA-GMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPI 645
S +P+ P A P+ TP+ PS+ + + +Q + P + P + L P
Sbjct: 194 STTAPINPAAINPTPINPTPINPTPINPSSHQPSCYQPSSHQPNSHQPQLLLTQLPSTPA 253
Query: 646 YGQPMYSSPFVYSPMNPHTNYPMQQTTPQPNAQFTPT 682
P +P Y P N H P +T P+ Q T
Sbjct: 254 PINPTPINPSSYQP-NSHP--PQLPSTQLPSTQLPST 287
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.5 bits (63), Expect = 9.6
Identities = 26/91 (28%), Positives = 30/91 (32%), Gaps = 8/91 (8%)
Query: 591 PVPPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQCVLYGQPIYGQPM 650
P PP P Y P P P N P AP P P Y P+
Sbjct: 107 PYPPPPN--PPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPP----PNPPYPPPL 160
Query: 651 YSSPFVYSPMNPHTNYPMQQTTPQPNAQFTP 681
Y P +P P+ YP P PN + P
Sbjct: 161 YPPP--PNPPPPNAPYPPPPYPPPPNPPYPP 189
>SB_8102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 690
Score = 29.5 bits (63), Expect = 9.6
Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 3/105 (2%)
Query: 535 RASRPRQTTSAAPVQXXXXXXXXXXXXXWPPSTNAAGNMNTFIL--GVGMAPQMSLISPV 592
+A+RP +T SAA V WP + T + G+ + +SP
Sbjct: 536 KAARPLRTKSAAVVSRELAGIYAEGPLTWPKVIPQSSQQTTGWMSNGLSQGTTGAKLSPS 595
Query: 593 PPMAGMLPLYYTPMATMAPVPSTSEAANHQNLHNNPQQYAPPPMQ 637
+AG Y+ +T + + AN L P + PP++
Sbjct: 596 LSIAGWHSAYFV-RSTRRSLHPARQTANAIKLKRVPLKAEKPPLE 639
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.130 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,172,739
Number of Sequences: 59808
Number of extensions: 1066752
Number of successful extensions: 4709
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 4587
Number of HSP's gapped (non-prelim): 146
length of query: 699
length of database: 16,821,457
effective HSP length: 87
effective length of query: 612
effective length of database: 11,618,161
effective search space: 7110314532
effective search space used: 7110314532
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 63 (29.5 bits)
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