Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000486-TA|BGIBMGA000486-PA|IPR013767|PAS fold,
IPR013655|PAS fold-3, IPR000014|PAS
(699 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein. 189 2e-49
AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein. 189 2e-49
AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein. 189 2e-49
AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein. 189 2e-49
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 32 0.045
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 26 2.9
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 26 3.9
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 25 6.8
>AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 189 bits (460), Expect = 2e-49
Identities = 91/183 (49%), Positives = 127/183 (69%), Gaps = 3/183 (1%)
Query: 224 SKTYRMMTQNGDYIKIETEWSSFINPWSKKLEFVIGKHYIIEGPENPDVFQSQD--PEKH 281
S+ YR + NG YI + TEW+SF+NPWS++LEFVIG H I++GP DVF +
Sbjct: 3 SQPYRFLVNNGCYIVLSTEWTSFVNPWSRELEFVIGHHRILQGPSIADVFAVSPFYCQTQ 62
Query: 282 TKLCDEQIKKSMVFRENIVKLMNEALTKPAEVAKQQMSKRCQDLASFMESLMEEPPKNDE 341
+ D+ +K++ + E I++L+ E + KP+++ KQ++SKRC+ LASFME LM+E + +
Sbjct: 63 NQFSDDTLKEAKMVEEQILRLLKEPVAKPSDMVKQEVSKRCKALASFMEELMDEVAQPEL 122
Query: 342 ELRLEIQDPDHSYYERDSVMLGGISPHHDYNDSKSSTETPLSYNQLNYNETLQSTCLSPM 401
+L L + + D ++ ERDSVMLG ISPHH+Y DSKSS+ETP SYNQLNYNE LQ S
Sbjct: 123 KLNL-LNESDFTFSERDSVMLGEISPHHEYFDSKSSSETPPSYNQLNYNENLQRFFDSRP 181
Query: 402 AQN 404
A N
Sbjct: 182 AMN 184
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 432 GDYHHVRLTEFLLTKHNDEME 452
G + LTE LL KHN++M+
Sbjct: 265 GSFQPPTLTEELLCKHNEDMQ 285
>AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 189 bits (460), Expect = 2e-49
Identities = 91/183 (49%), Positives = 127/183 (69%), Gaps = 3/183 (1%)
Query: 224 SKTYRMMTQNGDYIKIETEWSSFINPWSKKLEFVIGKHYIIEGPENPDVFQSQD--PEKH 281
S+ YR + NG YI + TEW+SF+NPWS++LEFVIG H I++GP DVF +
Sbjct: 3 SQPYRFLVNNGCYIVLSTEWTSFVNPWSRELEFVIGHHRILQGPSIADVFAVSPFYCQTQ 62
Query: 282 TKLCDEQIKKSMVFRENIVKLMNEALTKPAEVAKQQMSKRCQDLASFMESLMEEPPKNDE 341
+ D+ +K++ + E I++L+ E + KP+++ KQ++SKRC+ LASFME LM+E + +
Sbjct: 63 NQFSDDTLKEAKMVEEQILRLLKEPVAKPSDMVKQEVSKRCKALASFMEELMDEVAQPEL 122
Query: 342 ELRLEIQDPDHSYYERDSVMLGGISPHHDYNDSKSSTETPLSYNQLNYNETLQSTCLSPM 401
+L L + + D ++ ERDSVMLG ISPHH+Y DSKSS+ETP SYNQLNYNE LQ S
Sbjct: 123 KLNL-LNESDFTFSERDSVMLGEISPHHEYFDSKSSSETPPSYNQLNYNENLQRFFDSRP 181
Query: 402 AQN 404
A N
Sbjct: 182 AMN 184
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 432 GDYHHVRLTEFLLTKHNDEME 452
G + LTE LL KHN++M+
Sbjct: 265 GSFQPPTLTEELLCKHNEDMQ 285
>AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 189 bits (460), Expect = 2e-49
Identities = 91/183 (49%), Positives = 127/183 (69%), Gaps = 3/183 (1%)
Query: 224 SKTYRMMTQNGDYIKIETEWSSFINPWSKKLEFVIGKHYIIEGPENPDVFQSQD--PEKH 281
S+ YR + NG YI + TEW+SF+NPWS++LEFVIG H I++GP DVF +
Sbjct: 3 SQPYRFLVNNGCYIVLSTEWTSFVNPWSRELEFVIGHHRILQGPSIADVFAVSPFYCQTQ 62
Query: 282 TKLCDEQIKKSMVFRENIVKLMNEALTKPAEVAKQQMSKRCQDLASFMESLMEEPPKNDE 341
+ D+ +K++ + E I++L+ E + KP+++ KQ++SKRC+ LASFME LM+E + +
Sbjct: 63 NQFSDDTLKEAKMVEEQILRLLKEPVAKPSDMVKQEVSKRCKALASFMEELMDEVAQPEL 122
Query: 342 ELRLEIQDPDHSYYERDSVMLGGISPHHDYNDSKSSTETPLSYNQLNYNETLQSTCLSPM 401
+L L + + D ++ ERDSVMLG ISPHH+Y DSKSS+ETP SYNQLNYNE LQ S
Sbjct: 123 KLNL-LNESDFTFSERDSVMLGEISPHHEYFDSKSSSETPPSYNQLNYNENLQRFFDSRP 181
Query: 402 AQN 404
A N
Sbjct: 182 AMN 184
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 432 GDYHHVRLTEFLLTKHNDEME 452
G + LTE LL KHN++M+
Sbjct: 265 GSFQPPTLTEELLCKHNEDMQ 285
>AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 189 bits (460), Expect = 2e-49
Identities = 91/183 (49%), Positives = 127/183 (69%), Gaps = 3/183 (1%)
Query: 224 SKTYRMMTQNGDYIKIETEWSSFINPWSKKLEFVIGKHYIIEGPENPDVFQSQD--PEKH 281
S+ YR + NG YI + TEW+SF+NPWS++LEFVIG H I++GP DVF +
Sbjct: 3 SQPYRFLVNNGCYIVLSTEWTSFVNPWSRELEFVIGHHRILQGPSIADVFAVSPFYCQTQ 62
Query: 282 TKLCDEQIKKSMVFRENIVKLMNEALTKPAEVAKQQMSKRCQDLASFMESLMEEPPKNDE 341
+ D+ +K++ + E I++L+ E + KP+++ KQ++SKRC+ LASFME LM+E + +
Sbjct: 63 NQFSDDTLKEAKMVEEQILRLLKEPVAKPSDMVKQEVSKRCKALASFMEELMDEVAQPEL 122
Query: 342 ELRLEIQDPDHSYYERDSVMLGGISPHHDYNDSKSSTETPLSYNQLNYNETLQSTCLSPM 401
+L L + + D ++ ERDSVMLG ISPHH+Y DSKSS+ETP SYNQLNYNE LQ S
Sbjct: 123 KLNL-LNESDFTFSERDSVMLGEISPHHEYFDSKSSSETPPSYNQLNYNENLQRFFDSRP 181
Query: 402 AQN 404
A N
Sbjct: 182 AMN 184
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 432 GDYHHVRLTEFLLTKHNDEME 452
G + LTE LL KHN++M+
Sbjct: 265 GSFQPPTLTEELLCKHNEDMQ 285
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 32.3 bits (70), Expect = 0.045
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 166 RHSANGNLEYLDPESVPYLGYLPQDVQDKDALQLYHPEDLEYLQQVYEVIVKDGGMPRSK 225
RH +G + D GYL +V H +D+ ++ + D
Sbjct: 524 RHLIDGRIVQCDQRISIVAGYLTDEVSGLSPFTFMHRDDVRWVIVALRQMY-DYNQNGES 582
Query: 226 TYRMMTQNGDYIKIET 241
YR+M++ GD+I ++T
Sbjct: 583 CYRLMSRTGDFIYLKT 598
Score = 30.7 bits (66), Expect = 0.14
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 160 VNPFVMRHSANGNLEYLDPESVPYLGYLPQDVQDKDALQLYHPEDLEYLQQ 210
+N F++ + G + + P +LG+ D+ ++ L HP+D L+Q
Sbjct: 299 LNGFLLTVTCRGQIVLVSPSVEQFLGHCQTDLYGQNLFTLTHPDDHALLKQ 349
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 26.2 bits (55), Expect = 2.9
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 265 EGPENPDVFQSQDPEKHTKLCDEQIKKSMVFREN---IVKLMNEALTKPAEVAKQQMSKR 321
+G ++ +++ K +K E+ +K+ E +KL E L K AK+Q K
Sbjct: 782 KGHRERELKSAEEDLKRSKKKSEESRKNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKL 841
Query: 322 CQDLASFMESLMEEPPKNDE 341
+ +A+ + L+E DE
Sbjct: 842 EEQIAALQQRLVEVSGTTDE 861
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 450 EMEKELINMHRESRSNSKGERDKTSNETRQKKKEHLAR 487
E+ ++ RE K +R+K E +Q++KE R
Sbjct: 473 ELREQREREQREKEQREKEQREKEERERQQREKEQRER 510
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 25.0 bits (52), Expect = 6.8
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 181 VPYLGYLPQDVQDKDALQLYHPEDL 205
+P YLP VQ+ D ++LY ++
Sbjct: 1068 LPCYRYLPDPVQENDCIKLYWDREI 1092
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.315 0.130 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,197
Number of Sequences: 2123
Number of extensions: 32018
Number of successful extensions: 78
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 52
Number of HSP's gapped (non-prelim): 18
length of query: 699
length of database: 516,269
effective HSP length: 69
effective length of query: 630
effective length of database: 369,782
effective search space: 232962660
effective search space used: 232962660
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 51 (24.6 bits)
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