GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000485-TA|BGIBMGA000485-PA|undefined
         (162 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   1.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   8.9  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory
          receptor candidate 28 protein.
          Length = 248

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)

Query: 30 YSAYAVFSVDLVGLAFILKVFIMDNL 55
          Y+ Y +F   ++GL  ILK F +D L
Sbjct: 70 YAVYNIFGAFVMGLFCILK-FALDGL 94


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 17  VMPYVVSSTEYSHYSAYAVFSVDLVGLAFILKVF 50
           V+P       Y  Y A+ +F+V L+ L  I   F
Sbjct: 137 VVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFF 170


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.306    0.127    0.345 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,239
Number of Sequences: 317
Number of extensions: 620
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 162
length of database: 114,650
effective HSP length: 52
effective length of query: 110
effective length of database: 98,166
effective search space: 10798260
effective search space used: 10798260
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (20.6 bits)
S2: 40 (20.2 bits)