GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000485-TA|BGIBMGA000485-PA|undefined
         (162 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    31   0.024
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    31   0.024

>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 30.7 bits (66), Expect = 0.024
 Identities = 18/58 (31%), Positives = 24/58 (41%)

Query: 6   QPKEEDHEDRPVMPYVVSSTEYSHYSAYAVFSVDLVGLAFILKVFIMDNLENSENTDK 63
           QP  E  +D P  P++   T Y  YS     +VD    A+ L   I D L+      K
Sbjct: 494 QPIPESMKDAPQTPFLPYFTGYKGYSVQYAHNVDASRYAYKLAYEIADELQEISQVPK 551


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 30.7 bits (66), Expect = 0.024
 Identities = 18/58 (31%), Positives = 24/58 (41%)

Query: 6   QPKEEDHEDRPVMPYVVSSTEYSHYSAYAVFSVDLVGLAFILKVFIMDNLENSENTDK 63
           QP  E  +D P  P++   T Y  YS     +VD    A+ L   I D L+      K
Sbjct: 494 QPIPESMKDAPQTPFLPYFTGYKGYSVQYAHNVDASRYAYKLAYEIADELQEISQVPK 551


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.306    0.127    0.345 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,122
Number of Sequences: 2123
Number of extensions: 2341
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 162
length of database: 516,269
effective HSP length: 59
effective length of query: 103
effective length of database: 391,012
effective search space: 40274236
effective search space used: 40274236
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
S2: 45 (22.2 bits)