GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000484-TA|BGIBMGA000484-PA|IPR002553|Adaptin, N-terminal
         (753 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    24   3.3  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   7.7  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 13/45 (28%), Positives = 23/45 (51%)

Query: 96  RLSTVKLITKLARTPVRSPYTLCLQIRFAAKLAEEDPSEASEPYL 140
           R  T+ +I  +ARTP++S +++   +   A  A + P    E  L
Sbjct: 4   REETILVIPTMARTPLKSSFSISSILPETALEAPKSPENHPETEL 48


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 323 LAHLCEFIEDCEHVTLAVRIL 343
           + + C+F+ +C H TL + IL
Sbjct: 138 IENYCQFLYNCFHSTLLLMIL 158


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.134    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,708
Number of Sequences: 317
Number of extensions: 5536
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 2
length of query: 753
length of database: 114,650
effective HSP length: 62
effective length of query: 691
effective length of database: 94,996
effective search space: 65642236
effective search space used: 65642236
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)