Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000483-TA|BGIBMGA000483-PA|undefined
(382 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16484| Best HMM Match : MSG (HMM E-Value=0.24) 36 0.073
SB_34627| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10) 32 0.68
SB_36309| Best HMM Match : FeS (HMM E-Value=8) 31 1.2
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29) 31 1.2
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_5524| Best HMM Match : Glyco_hydro_31 (HMM E-Value=1.7e-10) 30 2.7
SB_5823| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_28959| Best HMM Match : Metallophos (HMM E-Value=2.8) 30 3.6
SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_44681| Best HMM Match : DUF1109 (HMM E-Value=0.85) 29 4.8
SB_31444| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_10165| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_57086| Best HMM Match : PT (HMM E-Value=2.4) 29 6.3
SB_16304| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_17670| Best HMM Match : RVT_1 (HMM E-Value=6.1e-25) 29 8.4
SB_5627| Best HMM Match : 7tm_1 (HMM E-Value=8.4e-16) 29 8.4
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.4
SB_12305| Best HMM Match : NAF1 (HMM E-Value=8) 29 8.4
>SB_16484| Best HMM Match : MSG (HMM E-Value=0.24)
Length = 661
Score = 35.5 bits (78), Expect = 0.073
Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Query: 298 YVPYNAHYHY-QQHEYAQWSPNDYNRMQTYYQHQGRSATSTPQPVAHQQRAHYSHP 352
YV Y YHY +QH Y P Y R TYY R T + H R H P
Sbjct: 579 YVLYATTYHYMRQHTYYMRQPTYYMRQPTYYM---RQPTYYMRQHTHYMRQHLRRP 631
>SB_34627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1925
Score = 33.5 bits (73), Expect = 0.29
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Query: 288 PPIRSHHQLLYVP-YNAHYHYQQHEYAQWSPNDYNRMQTYYQHQGRSATSTP---QPVAH 343
P I + L P H HYQQH Q SPN T++ HQ +S T+TP +P +
Sbjct: 1462 PNITKNQSLPTTPTITKHSHYQQH---QTSPNPVITNNTHH-HQTQSLTTTPNITKPSHY 1517
Query: 344 QQRAHYSHPL 353
QQ +P+
Sbjct: 1518 QQHPPSPNPV 1527
>SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10)
Length = 968
Score = 32.3 bits (70), Expect = 0.68
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Query: 279 PRCRRPESPPPIRSHHQLLYVPYNAHYHYQQHEYAQWSPND----YNRMQTYYQHQGRSA 334
PR P +P P R H L+ Y H Y H Y +P + + Y H +
Sbjct: 552 PRLNTPSTPTPTRRVHPSLHAQY-THAEY-THAYTPSTPKATRLVHPHLHAKYIHAYTPS 609
Query: 335 TSTP-QPVAHQQRAHYSH 351
T TP +PV + Y H
Sbjct: 610 TPTPTRPVPPRLHTEYIH 627
>SB_36309| Best HMM Match : FeS (HMM E-Value=8)
Length = 122
Score = 31.5 bits (68), Expect = 1.2
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 274 PVRAAPRCRRPESPPP----IRSHHQLLYVPYNAHYHYQQ------HEYAQWSPNDYNRM 323
P++A + + PE PP + Y P + +YQQ EY Q P+DY +
Sbjct: 56 PIQAKKKQKTPEECPPGLWGCKRGFLGGYYPETSPDYYQQGMPSEYSEYQQGYPSDYQNL 115
Query: 324 QTYYQH 329
+YY+H
Sbjct: 116 ASYYKH 121
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 291 RSHHQLLYVPYNAHYHYQQHEYAQWSPNDY-NRMQTYYQHQGRSATSTPQPVAHQQRAHY 349
+ HQL + + H H QQH+Y Q + + ++ Q Q Q + Q QQ+
Sbjct: 285 QQQHQL-HQQHQLHQHQQQHQYQQQHQHQHQHQHQQQQQQQQQQQQQQQQQQQQQQQQQQ 343
Query: 350 SHPLQLQ 356
LQ Q
Sbjct: 344 QQQLQQQ 350
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/58 (24%), Positives = 20/58 (34%)
Query: 294 HQLLYVPYNAHYHYQQHEYAQWSPNDYNRMQTYYQHQGRSATSTPQPVAHQQRAHYSH 351
HQ + H H QH++ Q + Q Q Q + Q QQ+ H
Sbjct: 299 HQQQHQYQQQHQHQHQHQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQQQQQQQQH 356
>SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29)
Length = 594
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
Query: 287 PPPIRSHHQLLYVPYNAH--YHYQQHEYAQWSPNDYNRMQTYYQHQGRSATSTPQPVAHQ 344
PP +HH +Y P N H + +H + P Y +Y H +SA P V
Sbjct: 104 PPGPHTHH--VYSPPNCHPPATFVEHGHCNCQPTAYLDNHYHYAHHSQSAQPRPVAVVAH 161
Query: 345 QRAHYSHPLQLQ 356
PLQ Q
Sbjct: 162 PPPLLLRPLQPQ 173
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 31.1 bits (67), Expect = 1.6
Identities = 21/84 (25%), Positives = 31/84 (36%), Gaps = 4/84 (4%)
Query: 169 QPSPSTNVTQMPFHACQRTNSNYSWPSKTSSDYV----TTRPCSTTPVPQQHTDACYAHS 224
QPS ++ TQ P T+ P T YV +P S P QQ +D Y +
Sbjct: 857 QPSDQSSFTQQPGDQALFTSQPNDQPFSTQQQYVHASFNQQPSSQAPQTQQFSDQAYLTN 916
Query: 225 QNMASFAHYQQHRHHENLYRNSCS 248
Q +Q + + + S
Sbjct: 917 QPSDQALSFQSSKDQSFTFNDQTS 940
>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1850
Score = 30.3 bits (65), Expect = 2.7
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 144 AVRGIAIKQQLGASDDMLQQMQN-ELQPSPSTNVTQMPFHACQRTNSNYSWPSKTSSDYV 202
A++G A +Q D QQ Q + S T TQ A Q+T S S S+ S DY
Sbjct: 539 AIQGDASQQAQATQVDASQQAQAAQAYASEQTQATQAD--ATQQTQSYASQQSQASQDYP 596
Query: 203 TTRPCSTTPVPQ 214
+ + +T P Q
Sbjct: 597 SQQTQATQPQEQ 608
>SB_5524| Best HMM Match : Glyco_hydro_31 (HMM E-Value=1.7e-10)
Length = 718
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 110 SAPRTERIRQRYGQESQPVSSDDEHDDYGFHRRPAVRGIAIKQQLG 155
S +T + R +ES P S + H Y +P VRGI ++ G
Sbjct: 378 SKGQTNYLNSRRNRESNPEPSGERHRHYRATGKPVVRGIGATERPG 423
>SB_5823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2324
Score = 30.3 bits (65), Expect = 2.7
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 151 KQQLGASDDMLQQMQNELQPSPSTNVTQMPFHACQRTNSNYSWPSKTSSDYVTTRPCSTT 210
+Q+LG + QQ+ P P M F +N P + + T+R +
Sbjct: 969 QQELGFLQNQFQQLFPSASPEPRQPSPMMGFQPSYLSNPFAMPPGTSPTPGSTSRSMQSN 1028
Query: 211 PVPQQH 216
PVP H
Sbjct: 1029 PVPSHH 1034
>SB_28959| Best HMM Match : Metallophos (HMM E-Value=2.8)
Length = 597
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 199 SDYVTTR-----PCSTTPVPQQHTDACYAHSQNMASFAHYQQHRHHENLYRNSCS 248
SDYV R P T + Q+ D Y + ++A + HY + +YR C+
Sbjct: 474 SDYVADRVLNKDPIIATHMQQEFEDLFYKYHVDLALWGHYHSYERTCPVYRQKCT 528
>SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 29.5 bits (63), Expect = 4.8
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 283 RPESPPPIRSHHQLL--YVPYNAH----YHYQQH--EYA--QWSPNDYNRMQTYYQHQGR 332
RP+ PP H L Y P AH YH QQ+ +Y Q SP+ ++ Q Y
Sbjct: 415 RPQQNPPNDQQHVGLGAYPPIQAHPTQPYHMQQYPAQYQGYQVSPDPAHQQQNYQAVPPP 474
Query: 333 SATSTPQPVAHQQRAH 348
S + P + H ++AH
Sbjct: 475 STSQQPGQM-HYEQAH 489
>SB_44681| Best HMM Match : DUF1109 (HMM E-Value=0.85)
Length = 377
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 293 HHQLLYVPYNAHYHYQQHEYAQWSPNDYNRMQTYYQH 329
H+ ++ Y+ YHY H Y + +DY+ Y+ H
Sbjct: 78 HYHVIEPHYHDDYHYYDHHYDDYHHDDYH--HDYHHH 112
>SB_31444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 110 SAPRTERIRQRYGQESQPVSSDDE 133
SAP ++ +RQ+Y S PV DDE
Sbjct: 31 SAPLSKELRQKYNVRSIPVRKDDE 54
>SB_10165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 29.1 bits (62), Expect = 6.3
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 176 VTQMPFHACQRTNSNYSWPSKTSSDYVTTRPCSTTPVPQQHTDACYAHSQNMASFAHYQQ 235
V Q+ H C+RT S S VT + S T TD + + N S+ +Y+Q
Sbjct: 4 VLQIKQHDCERTKVRMLRVSSDKSTRVTDKATSNTAT--CITDKATSITDNRYSYVYYRQ 61
Query: 236 ----HRHHENLYRNSCSLYANVGC 255
+R+ YR S Y C
Sbjct: 62 SHEYYRYSYVYYRLSHEYYRTATC 85
>SB_57086| Best HMM Match : PT (HMM E-Value=2.4)
Length = 226
Score = 29.1 bits (62), Expect = 6.3
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 292 SHHQLLYVPYNAHYHYQQHEYAQWSPNDYNRMQTY-YQHQGRSATSTPQPVAHQQRAHYS 350
+HHQ + + + H H+Y P+ Y T+ Y HQ + T Q HQ Y+
Sbjct: 91 THHQYTHQYTHQYPHQYPHQYPHQYPHQYPHQYTHQYTHQ-YTHQYTHQ-YTHQYTHQYT 148
Query: 351 H 351
H
Sbjct: 149 H 149
Score = 28.7 bits (61), Expect = 8.4
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 289 PIRSHHQLLYVPYNAHYHYQQHEYAQWSPNDYNRMQTY-YQHQGRSATSTPQPVAHQQRA 347
P + HQ + + + H H+Y P+ Y T+ Y HQ + T Q HQ
Sbjct: 19 PHQYTHQYTHQYPHQYPHQYTHQYTHQYPHQYTHQYTHQYTHQ-YTHQYTHQ-YTHQYTH 76
Query: 348 HYSHP 352
Y+HP
Sbjct: 77 PYTHP 81
>SB_16304| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1489
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 160 MLQQMQNELQPSPSTNVTQMP 180
M+QQ+Q +LQ S ST TQ+P
Sbjct: 1154 MVQQLQRQLQTSKSTTKTQLP 1174
>SB_17670| Best HMM Match : RVT_1 (HMM E-Value=6.1e-25)
Length = 1271
Score = 28.7 bits (61), Expect = 8.4
Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 3/104 (2%)
Query: 135 DDYGF-HRRPAVRGIAIKQQLGASDDMLQQMQNELQPSPSTNVTQMPFHACQRTNSNYSW 193
DD GF HR+ R ++ SD + + ELQ + ++P +A Q S S
Sbjct: 1062 DDLGFKHRKSERRSGEVRPDREESDQDCEDGEQELQARNAEAAEKLPRNASQHDKSRSS- 1120
Query: 194 PSKTSSDYVTTRPCSTTP-VPQQHTDACYAHSQNMASFAHYQQH 236
S T P + P Q+ A + M +A ++H
Sbjct: 1121 NSVVGRPLRTKLPQTAVPCADQEIRQRDQAAKEKMKQYADNKRH 1164
>SB_5627| Best HMM Match : 7tm_1 (HMM E-Value=8.4e-16)
Length = 546
Score = 28.7 bits (61), Expect = 8.4
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 150 IKQQL----GASDDMLQQMQNELQPSPSTNVTQMPFHACQRTNSNYSWPSKTSSDYVT-T 204
IKQQ+ + +D + + E + PST VT + + N N W SK S Y + T
Sbjct: 284 IKQQMPYGYDSYEDSSSKSRTEAETLPSTTVTNLEQITTKPKNLNKIWTSK--SPYKSRT 341
Query: 205 RPCSTTP-VPQQHTD 218
P T P Q+ +D
Sbjct: 342 HPSQTEPRTAQKQSD 356
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 28.7 bits (61), Expect = 8.4
Identities = 20/85 (23%), Positives = 35/85 (41%)
Query: 129 SSDDEHDDYGFHRRPAVRGIAIKQQLGASDDMLQQMQNELQPSPSTNVTQMPFHACQRTN 188
+SD + GF+ + G A ++ +D Q + Q P+T T + T+
Sbjct: 286 NSDGSDSESGFNLKWKAEGGAFTERPATTDTTTQTTRATSQTIPTTRATSEAMPKTRATS 345
Query: 189 SNYSWPSKTSSDYVTTRPCSTTPVP 213
+ + +K S+ TR T VP
Sbjct: 346 TTQAPTTKKSTAPEATRVSIKTMVP 370
>SB_12305| Best HMM Match : NAF1 (HMM E-Value=8)
Length = 400
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Query: 274 PVRAAPRCRRPESPPPIRSHHQLLYVPYNAHYHYQQHEYAQWSPNDYNRMQTYYQHQG 331
P AAP +P + P + Y Y +Q +A+WS DY + Y QG
Sbjct: 36 PGSAAPPTAQPRAEAPSVGDYGAAYSSYG-----KQEGFARWSVGDYGAAYSSYGKQG 88
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.129 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,169,870
Number of Sequences: 59808
Number of extensions: 501681
Number of successful extensions: 1612
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1576
Number of HSP's gapped (non-prelim): 50
length of query: 382
length of database: 16,821,457
effective HSP length: 83
effective length of query: 299
effective length of database: 11,857,393
effective search space: 3545360507
effective search space used: 3545360507
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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