Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000483-TA|BGIBMGA000483-PA|undefined
         (382 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC051795-1|AAH51795.1| 1191|Homo sapiens atrophin 1 protein.           37   0.10 
U91935-1|AAB49728.1|  648|Homo sapiens retina-derived POU-domain...    34   0.73 
U91934-1|AAB49727.1|  684|Homo sapiens retina-derived POU-domain...    34   0.73 
U47924-15|AAB51321.1| 1190|Homo sapiens DRPLA protein.                 33   1.3  
AB209345-1|BAD92582.1|  774|Homo sapiens atrophin-1 variant prot...    33   1.3  
Z22814-1|CAA80468.1|  127|Homo sapiens protein ( H.sapiens ORF, ...    33   1.7  
AK122582-1|BAC56923.1| 1383|Homo sapiens FLJ00269 protein protein.     33   1.7  
BC129990-1|AAI29991.1|  695|Homo sapiens nuclear fragile X menta...    32   3.9  
BC108307-1|AAI08308.1|  695|Homo sapiens nuclear fragile X menta...    32   3.9  
AY232289-1|AAP69984.1|  695|Homo sapiens proliferation-inducing ...    32   3.9  
AJ493465-1|CAD38278.1|  695|Homo sapiens FMRP interacting protei...    32   3.9  
AB037742-1|BAA92559.1|  714|Homo sapiens KIAA1321 protein protein.     32   3.9  
BX649571-2|CAI18773.1|  951|Homo sapiens ADAMTS-like 2 protein.        31   5.1  
BX649571-1|CAM26559.1| 1060|Homo sapiens ADAMTS-like 2 protein.        31   5.1  
BX629352-2|CAI23592.1|  951|Homo sapiens ADAMTS-like 2 protein.        31   5.1  
BX629352-1|CAM28356.1| 1060|Homo sapiens ADAMTS-like 2 protein.        31   5.1  
BX324209-2|CAI17317.1|  951|Homo sapiens ADAMTS-like 2 protein.        31   5.1  
BX324209-1|CAM24586.1| 1060|Homo sapiens ADAMTS-like 2 protein.        31   5.1  
BC050544-1|AAH50544.1|  951|Homo sapiens ADAMTS-like 2 protein.        31   5.1  
AL590609-6|CAI14804.1|  182|Homo sapiens FUS interacting protein...    31   5.1  
AF508785-1|AAM34265.1|  880|Homo sapiens GAS2-related protein is...    31   5.1  
AB011177-1|BAA25531.2| 1031|Homo sapiens KIAA0605 protein protein.     31   5.1  
BC001107-1|AAH01107.1|  183|Homo sapiens FUS interacting protein...    31   9.0  
AY150181-1|AAN65381.1|  183|Homo sapiens splicing factor SRp38-2...    31   9.0  
AY048592-1|AAL06098.1|  183|Homo sapiens TLS-associated SR prote...    31   9.0  
AL590609-5|CAI14803.1|  183|Homo sapiens FUS interacting protein...    31   9.0  
AK001286-1|BAA91601.1|  183|Homo sapiens protein ( Homo sapiens ...    31   9.0  
AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remod...    31   9.0  
AF419331-1|AAL16665.1|  183|Homo sapiens TLS-associated protein ...    31   9.0  
AF047448-1|AAC70918.1|  183|Homo sapiens TLS-associated protein ...    31   9.0  

>BC051795-1|AAH51795.1| 1191|Homo sapiens atrophin 1 protein.
          Length = 1191

 Score = 37.1 bits (82), Expect = 0.10
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 3/68 (4%)

Query: 288 PPIRSHHQLLYVPYNAHYHYQQHEYAQWSPNDYNRMQTYYQHQGRSATSTPQPVAHQQR- 346
           PP        + P + H+H+ Q +  Q       + Q   QH G S    P    H    
Sbjct: 463 PPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEG 522

Query: 347 --AHYSHP 352
             +H++HP
Sbjct: 523 GSSHHAHP 530


>U91935-1|AAB49728.1|  648|Homo sapiens retina-derived POU-domain
           factor-1 protein.
          Length = 648

 Score = 34.3 bits (75), Expect = 0.73
 Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 8/86 (9%)

Query: 152 QQLGASDDMLQQMQNELQPSPSTN-----VTQMPFHACQ---RTNSNYSWPSKTSSDYVT 203
           QQL       QQ Q + QP PSTN       Q P  + Q   +       P  +      
Sbjct: 172 QQLQLQLQQQQQQQQQQQPPPSTNQHPQPAPQAPSQSQQQPLQPTPPQQPPPASQQPPAP 231

Query: 204 TRPCSTTPVPQQHTDACYAHSQNMAS 229
           T      P PQQH    ++H+QN  S
Sbjct: 232 TSQLQQAPQPQQHQPHSHSHNQNQPS 257


>U91934-1|AAB49727.1|  684|Homo sapiens retina-derived POU-domain
           factor-1 protein.
          Length = 684

 Score = 34.3 bits (75), Expect = 0.73
 Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 8/86 (9%)

Query: 152 QQLGASDDMLQQMQNELQPSPSTN-----VTQMPFHACQ---RTNSNYSWPSKTSSDYVT 203
           QQL       QQ Q + QP PSTN       Q P  + Q   +       P  +      
Sbjct: 172 QQLQLQLQQQQQQQQQQQPPPSTNQHPQPAPQAPSQSQQQPLQPTPPQQPPPASQQPPAP 231

Query: 204 TRPCSTTPVPQQHTDACYAHSQNMAS 229
           T      P PQQH    ++H+QN  S
Sbjct: 232 TSQLQQAPQPQQHQPHSHSHNQNQPS 257


>U47924-15|AAB51321.1| 1190|Homo sapiens DRPLA protein.
          Length = 1190

 Score = 33.5 bits (73), Expect = 1.3
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 4/68 (5%)

Query: 288 PPIRSHHQLLYVPYNAHYHYQQHEYAQWSPNDYNRMQTYYQHQGRSATSTPQPVAHQQR- 346
           PP        + P + H+H+ Q +  Q       + Q   QH G S    P    H    
Sbjct: 463 PPSTGAQSTAHPPVSTHHHHHQQQQQQ-QQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEG 521

Query: 347 --AHYSHP 352
             +H++HP
Sbjct: 522 GSSHHAHP 529


>AB209345-1|BAD92582.1|  774|Homo sapiens atrophin-1 variant
           protein.
          Length = 774

 Score = 33.5 bits (73), Expect = 1.3
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 4/68 (5%)

Query: 288 PPIRSHHQLLYVPYNAHYHYQQHEYAQWSPNDYNRMQTYYQHQGRSATSTPQPVAHQQR- 346
           PP        + P + H+H+ Q +  Q       + Q   QH G S    P    H    
Sbjct: 47  PPSTGAQSTAHPPVSTHHHHHQQQQQQ-QQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEG 105

Query: 347 --AHYSHP 352
             +H++HP
Sbjct: 106 GSSHHAHP 113


>Z22814-1|CAA80468.1|  127|Homo sapiens protein ( H.sapiens ORF,
           complete CDS. ).
          Length = 127

 Score = 33.1 bits (72), Expect = 1.7
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 5/68 (7%)

Query: 288 PPIRSHHQLLYVPYNAHYHYQQHEYAQWSPNDYNRMQTYYQHQGRSATSTPQPVAHQQR- 346
           PP        + P + H+H+  H+  Q       + Q   QH G S    P    H    
Sbjct: 32  PPSTGAQSTAHPPVSTHHHH--HQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEG 89

Query: 347 --AHYSHP 352
             +H++HP
Sbjct: 90  GSSHHAHP 97


>AK122582-1|BAC56923.1| 1383|Homo sapiens FLJ00269 protein protein.
          Length = 1383

 Score = 33.1 bits (72), Expect = 1.7
 Identities = 15/73 (20%), Positives = 35/73 (47%)

Query: 143 PAVRGIAIKQQLGASDDMLQQMQNELQPSPSTNVTQMPFHACQRTNSNYSWPSKTSSDYV 202
           P+ RG+ +    G++D +    +      PS+ +   P ++ ++  +   +PS ++ D  
Sbjct: 723 PSFRGVHVSFTTGSTDSLASDSRTCSDGGPSSELAHSPTNSGKKLFAPVPFPSGSTEDVS 782

Query: 203 TTRPCSTTPVPQQ 215
            + P    P+PQ+
Sbjct: 783 PSGPQQPPPLPQK 795


>BC129990-1|AAI29991.1|  695|Homo sapiens nuclear fragile X mental
           retardation protein interacting protein 2 protein.
          Length = 695

 Score = 31.9 bits (69), Expect = 3.9
 Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 6/115 (5%)

Query: 274 PVRAAPRCRRPESPPPIRSHHQLLYVPYNAHYHYQQHEYAQWSPNDYNRMQTYYQHQGR- 332
           P +  P+       P      Q     ++ HY++  H +     + + +   Y QH    
Sbjct: 5   PGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEG 64

Query: 333 SATSTPQPVAHQQRAHYSHPLQLQVKIT-----VGPTGEVQISVTPKPHDTAEKP 382
           S  + P+P+ H+Q+       +   K T      G  GE +IS+     D A  P
Sbjct: 65  SPKAQPKPLKHEQKHTLQQHQETPKKKTGYGELNGNAGEREISLKNLSSDEATNP 119


>BC108307-1|AAI08308.1|  695|Homo sapiens nuclear fragile X mental
           retardation protein interacting protein 2 protein.
          Length = 695

 Score = 31.9 bits (69), Expect = 3.9
 Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 6/115 (5%)

Query: 274 PVRAAPRCRRPESPPPIRSHHQLLYVPYNAHYHYQQHEYAQWSPNDYNRMQTYYQHQGR- 332
           P +  P+       P      Q     ++ HY++  H +     + + +   Y QH    
Sbjct: 5   PGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEG 64

Query: 333 SATSTPQPVAHQQRAHYSHPLQLQVKIT-----VGPTGEVQISVTPKPHDTAEKP 382
           S  + P+P+ H+Q+       +   K T      G  GE +IS+     D A  P
Sbjct: 65  SPKAQPKPLKHEQKHTLQQHQETPKKKTGYGELNGNAGEREISLKNLSSDEATNP 119


>AY232289-1|AAP69984.1|  695|Homo sapiens proliferation-inducing
           gene 1 protein.
          Length = 695

 Score = 31.9 bits (69), Expect = 3.9
 Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 6/115 (5%)

Query: 274 PVRAAPRCRRPESPPPIRSHHQLLYVPYNAHYHYQQHEYAQWSPNDYNRMQTYYQHQGR- 332
           P +  P+       P      Q     ++ HY++  H +     + + +   Y QH    
Sbjct: 5   PGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEG 64

Query: 333 SATSTPQPVAHQQRAHYSHPLQLQVKIT-----VGPTGEVQISVTPKPHDTAEKP 382
           S  + P+P+ H+Q+       +   K T      G  GE +IS+     D A  P
Sbjct: 65  SPKAQPKPLKHEQKHTLQQHQETPKKKTGYGELNGNAGEREISLKNLSSDEATNP 119


>AJ493465-1|CAD38278.1|  695|Homo sapiens FMRP interacting protein,
           82kD protein.
          Length = 695

 Score = 31.9 bits (69), Expect = 3.9
 Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 6/115 (5%)

Query: 274 PVRAAPRCRRPESPPPIRSHHQLLYVPYNAHYHYQQHEYAQWSPNDYNRMQTYYQHQGR- 332
           P +  P+       P      Q     ++ HY++  H +     + + +   Y QH    
Sbjct: 5   PGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEG 64

Query: 333 SATSTPQPVAHQQRAHYSHPLQLQVKIT-----VGPTGEVQISVTPKPHDTAEKP 382
           S  + P+P+ H+Q+       +   K T      G  GE +IS+     D A  P
Sbjct: 65  SPKAQPKPLKHEQKHTLQQHQETPKKKTGYGELNGNAGEREISLKNLSSDEATNP 119


>AB037742-1|BAA92559.1|  714|Homo sapiens KIAA1321 protein protein.
          Length = 714

 Score = 31.9 bits (69), Expect = 3.9
 Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 6/115 (5%)

Query: 274 PVRAAPRCRRPESPPPIRSHHQLLYVPYNAHYHYQQHEYAQWSPNDYNRMQTYYQHQGR- 332
           P +  P+       P      Q     ++ HY++  H +     + + +   Y QH    
Sbjct: 24  PGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEG 83

Query: 333 SATSTPQPVAHQQRAHYSHPLQLQVKIT-----VGPTGEVQISVTPKPHDTAEKP 382
           S  + P+P+ H+Q+       +   K T      G  GE +IS+     D A  P
Sbjct: 84  SPKAQPKPLKHEQKHTLQQHQETPKKKTGYGELNGNAGEREISLKNLSSDEATNP 138


>BX649571-2|CAI18773.1|  951|Homo sapiens ADAMTS-like 2 protein.
          Length = 951

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 281 CRRPESPPPIRSHHQLLYVPYNAH-YHYQQHEYAQWSPNDY 320
           CR  E PP  RS  +   V +N+H Y+ + H++    P+DY
Sbjct: 100 CRVQECPPDGRSFREEQCVSFNSHVYNGRTHQWKPLYPDDY 140


>BX649571-1|CAM26559.1| 1060|Homo sapiens ADAMTS-like 2 protein.
          Length = 1060

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 281 CRRPESPPPIRSHHQLLYVPYNAH-YHYQQHEYAQWSPNDY 320
           CR  E PP  RS  +   V +N+H Y+ + H++    P+DY
Sbjct: 209 CRVQECPPDGRSFREEQCVSFNSHVYNGRTHQWKPLYPDDY 249


>BX629352-2|CAI23592.1|  951|Homo sapiens ADAMTS-like 2 protein.
          Length = 951

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 281 CRRPESPPPIRSHHQLLYVPYNAH-YHYQQHEYAQWSPNDY 320
           CR  E PP  RS  +   V +N+H Y+ + H++    P+DY
Sbjct: 100 CRVQECPPDGRSFREEQCVSFNSHVYNGRTHQWKPLYPDDY 140


>BX629352-1|CAM28356.1| 1060|Homo sapiens ADAMTS-like 2 protein.
          Length = 1060

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 281 CRRPESPPPIRSHHQLLYVPYNAH-YHYQQHEYAQWSPNDY 320
           CR  E PP  RS  +   V +N+H Y+ + H++    P+DY
Sbjct: 209 CRVQECPPDGRSFREEQCVSFNSHVYNGRTHQWKPLYPDDY 249


>BX324209-2|CAI17317.1|  951|Homo sapiens ADAMTS-like 2 protein.
          Length = 951

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 281 CRRPESPPPIRSHHQLLYVPYNAH-YHYQQHEYAQWSPNDY 320
           CR  E PP  RS  +   V +N+H Y+ + H++    P+DY
Sbjct: 100 CRVQECPPDGRSFREEQCVSFNSHVYNGRTHQWKPLYPDDY 140


>BX324209-1|CAM24586.1| 1060|Homo sapiens ADAMTS-like 2 protein.
          Length = 1060

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 281 CRRPESPPPIRSHHQLLYVPYNAH-YHYQQHEYAQWSPNDY 320
           CR  E PP  RS  +   V +N+H Y+ + H++    P+DY
Sbjct: 209 CRVQECPPDGRSFREEQCVSFNSHVYNGRTHQWKPLYPDDY 249


>BC050544-1|AAH50544.1|  951|Homo sapiens ADAMTS-like 2 protein.
          Length = 951

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 281 CRRPESPPPIRSHHQLLYVPYNAH-YHYQQHEYAQWSPNDY 320
           CR  E PP  RS  +   V +N+H Y+ + H++    P+DY
Sbjct: 100 CRVQECPPDGRSFREEQCVSFNSHVYNGRTHQWKPLYPDDY 140


>AL590609-6|CAI14804.1|  182|Homo sapiens FUS interacting protein
           (serine/arginine-rich) 1 protein.
          Length = 182

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 1/87 (1%)

Query: 119 QRYGQESQPVSSDDEHDDYGFHRRPAVRGIAIKQQLGASDDMLQQMQNELQPSPSTNVTQ 178
           Q   +E + V S   +DDY  +RR   R    ++    S D   +     +  P+    +
Sbjct: 95  QMKAKEGRNVYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYNYRRSYSPRNRPTGRPRR 154

Query: 179 MPFHACQRTNSNYSWPSKTSSDYVTTR 205
              H+      N SW ++ SS Y T+R
Sbjct: 155 SRSHS-DNDRPNCSWNTQYSSAYYTSR 180


>AF508785-1|AAM34265.1|  880|Homo sapiens GAS2-related protein
           isoform beta protein.
          Length = 880

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 20/73 (27%), Positives = 29/73 (39%)

Query: 163 QMQNELQPSPSTNVTQMPFHACQRTNSNYSWPSKTSSDYVTTRPCSTTPVPQQHTDACYA 222
           Q +  +Q  PS     M     Q       W + TSSD     P  ++P P++   A   
Sbjct: 293 QHEVRVQDGPSQTQPTMTISRSQSPPPPVDWKTYTSSDRRLRPPTPSSPRPRRERGAGTG 352

Query: 223 HSQNMASFAHYQQ 235
            S+ MA F   Q+
Sbjct: 353 ASREMAPFLRCQE 365


>AB011177-1|BAA25531.2| 1031|Homo sapiens KIAA0605 protein protein.
          Length = 1031

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 281 CRRPESPPPIRSHHQLLYVPYNAH-YHYQQHEYAQWSPNDY 320
           CR  E PP  RS  +   V +N+H Y+ + H++    P+DY
Sbjct: 180 CRVQECPPDGRSFREEQCVSFNSHVYNGRTHQWKPLYPDDY 220


>BC001107-1|AAH01107.1|  183|Homo sapiens FUS interacting protein
           (serine/arginine-rich) 1 protein.
          Length = 183

 Score = 30.7 bits (66), Expect = 9.0
 Identities = 22/87 (25%), Positives = 34/87 (39%)

Query: 119 QRYGQESQPVSSDDEHDDYGFHRRPAVRGIAIKQQLGASDDMLQQMQNELQPSPSTNVTQ 178
           Q   +E + V S   +DDY  +RR   R    ++    S D   +     + S  T   +
Sbjct: 95  QMKAKEGRNVYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYNYRRSYSPRNSRPTGRPR 154

Query: 179 MPFHACQRTNSNYSWPSKTSSDYVTTR 205
                      N SW ++ SS Y T+R
Sbjct: 155 RSRSHSDNDRPNCSWNTQYSSAYYTSR 181


>AY150181-1|AAN65381.1|  183|Homo sapiens splicing factor SRp38-2
           protein.
          Length = 183

 Score = 30.7 bits (66), Expect = 9.0
 Identities = 22/87 (25%), Positives = 34/87 (39%)

Query: 119 QRYGQESQPVSSDDEHDDYGFHRRPAVRGIAIKQQLGASDDMLQQMQNELQPSPSTNVTQ 178
           Q   +E + V S   +DDY  +RR   R    ++    S D   +     + S  T   +
Sbjct: 95  QMKAKEGRNVYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYNYRRSYSPRNSRPTGRPR 154

Query: 179 MPFHACQRTNSNYSWPSKTSSDYVTTR 205
                      N SW ++ SS Y T+R
Sbjct: 155 RSRSHSDNDRPNCSWNTQYSSAYYTSR 181


>AY048592-1|AAL06098.1|  183|Homo sapiens TLS-associated SR protein
           1 protein.
          Length = 183

 Score = 30.7 bits (66), Expect = 9.0
 Identities = 22/87 (25%), Positives = 34/87 (39%)

Query: 119 QRYGQESQPVSSDDEHDDYGFHRRPAVRGIAIKQQLGASDDMLQQMQNELQPSPSTNVTQ 178
           Q   +E + V S   +DDY  +RR   R    ++    S D   +     + S  T   +
Sbjct: 95  QMKAKEGRNVYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYNYRRSYSPRNSRPTGRPR 154

Query: 179 MPFHACQRTNSNYSWPSKTSSDYVTTR 205
                      N SW ++ SS Y T+R
Sbjct: 155 RSRSHSDNDRPNCSWNTQYSSAYYTSR 181


>AL590609-5|CAI14803.1|  183|Homo sapiens FUS interacting protein
           (serine/arginine-rich) 1 protein.
          Length = 183

 Score = 30.7 bits (66), Expect = 9.0
 Identities = 22/87 (25%), Positives = 34/87 (39%)

Query: 119 QRYGQESQPVSSDDEHDDYGFHRRPAVRGIAIKQQLGASDDMLQQMQNELQPSPSTNVTQ 178
           Q   +E + V S   +DDY  +RR   R    ++    S D   +     + S  T   +
Sbjct: 95  QMKAKEGRNVYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYNYRRSYSPRNSRPTGRPR 154

Query: 179 MPFHACQRTNSNYSWPSKTSSDYVTTR 205
                      N SW ++ SS Y T+R
Sbjct: 155 RSRSHSDNDRPNCSWNTQYSSAYYTSR 181


>AK001286-1|BAA91601.1|  183|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10424 fis, clone NT2RP1000272, highly similar to
           Homo sapiens TLS-associated protein TASR-2 mRNA. ).
          Length = 183

 Score = 30.7 bits (66), Expect = 9.0
 Identities = 22/87 (25%), Positives = 34/87 (39%)

Query: 119 QRYGQESQPVSSDDEHDDYGFHRRPAVRGIAIKQQLGASDDMLQQMQNELQPSPSTNVTQ 178
           Q   +E + V S   +DDY  +RR   R    ++    S D   +     + S  T   +
Sbjct: 95  QMKAKEGRNVYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYNYRRSYSPRNSRPTGRPR 154

Query: 179 MPFHACQRTNSNYSWPSKTSSDYVTTR 205
                      N SW ++ SS Y T+R
Sbjct: 155 RSRSHSDNDRPNCSWNTQYSSAYYTSR 181


>AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin
           remodeling complex subunit OSA2 protein.
          Length = 2165

 Score = 30.7 bits (66), Expect = 9.0
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 284 PESPPPIRSHHQLLYVPYNAHYHYQQHEYA-QWSPNDYNRMQTYYQHQGRSATSTPQPVA 342
           P +PP  + HH      ++ H H+  H +A Q   N + + Q   Q Q +       P++
Sbjct: 5   PAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPIS 64

Query: 343 H 343
           +
Sbjct: 65  N 65


>AF419331-1|AAL16665.1|  183|Homo sapiens TLS-associated protein
           TASR-1 protein.
          Length = 183

 Score = 30.7 bits (66), Expect = 9.0
 Identities = 22/87 (25%), Positives = 34/87 (39%)

Query: 119 QRYGQESQPVSSDDEHDDYGFHRRPAVRGIAIKQQLGASDDMLQQMQNELQPSPSTNVTQ 178
           Q   +E + V S   +DDY  +RR   R    ++    S D   +     + S  T   +
Sbjct: 95  QMKAKEGRNVYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYNYRRSYSPRNSRPTGRPR 154

Query: 179 MPFHACQRTNSNYSWPSKTSSDYVTTR 205
                      N SW ++ SS Y T+R
Sbjct: 155 RSRSHSDNDRPNCSWNTQYSSAYYTSR 181


>AF047448-1|AAC70918.1|  183|Homo sapiens TLS-associated protein
           TASR protein.
          Length = 183

 Score = 30.7 bits (66), Expect = 9.0
 Identities = 22/87 (25%), Positives = 34/87 (39%)

Query: 119 QRYGQESQPVSSDDEHDDYGFHRRPAVRGIAIKQQLGASDDMLQQMQNELQPSPSTNVTQ 178
           Q   +E + V S   +DDY  +RR   R    ++    S D   +     + S  T   +
Sbjct: 95  QMKAKEGRNVYSSSRYDDYDRYRRSRSRSYERRRSRSRSFDYNYRRSYSPRNSRPTGRPR 154

Query: 179 MPFHACQRTNSNYSWPSKTSSDYVTTR 205
                      N SW ++ SS Y T+R
Sbjct: 155 RSRSHSDNDRPNCSWNTQYSSAYYTSR 181


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.316    0.129    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,999,662
Number of Sequences: 224733
Number of extensions: 2178278
Number of successful extensions: 5560
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 5535
Number of HSP's gapped (non-prelim): 49
length of query: 382
length of database: 73,234,838
effective HSP length: 91
effective length of query: 291
effective length of database: 52,784,135
effective search space: 15360183285
effective search space used: 15360183285
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 66 (30.7 bits)