GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000482-TA|BGIBMGA000482-PA|undefined
         (239 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VZ53 Cluster: CG15207-PA; n=1; Drosophila melanogaste...    42   0.018
UniRef50_UPI0000D57867 Cluster: PREDICTED: similar to CG11203-PA...    38   0.17 
UniRef50_Q9HP74 Cluster: 3-phosphoglycerate kinase; n=5; Halobac...    35   2.1  
UniRef50_A7NFE3 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  

>UniRef50_Q9VZ53 Cluster: CG15207-PA; n=1; Drosophila
           melanogaster|Rep: CG15207-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 1037

 Score = 41.5 bits (93), Expect = 0.018
 Identities = 17/22 (77%), Positives = 21/22 (95%)

Query: 32  HRVVFDESANEFFEADYIIVVR 53
           +RVVFDE+ NEFFEADYII++R
Sbjct: 945 NRVVFDETRNEFFEADYIILIR 966


>UniRef50_UPI0000D57867 Cluster: PREDICTED: similar to CG11203-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG11203-PA - Tribolium castaneum
          Length = 1369

 Score = 38.3 bits (85), Expect = 0.17
 Identities = 15/22 (68%), Positives = 21/22 (95%)

Query: 32  HRVVFDESANEFFEADYIIVVR 53
           +RVVF+E+ NEFF+ADYII++R
Sbjct: 351 NRVVFNENKNEFFDADYIILIR 372


>UniRef50_Q9HP74 Cluster: 3-phosphoglycerate kinase; n=5;
           Halobacteriaceae|Rep: 3-phosphoglycerate kinase -
           Halobacterium salinarium (Halobacterium halobium)
          Length = 218

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 84  LSPPEGYKDMSLFNRDGTLREQAWWEAGDVV-LVGERSGTVFTPQH 128
           ++PP    D+ LF+ DGTL +  W     V   VG+R G  FT QH
Sbjct: 1   MAPPVDDYDVWLFDLDGTLVDTEWSYTRSVFDQVGDRLGVEFTDQH 46


>UniRef50_A7NFE3 Cluster: Putative uncharacterized protein; n=1;
           Roseiflexus castenholzii DSM 13941|Rep: Putative
           uncharacterized protein - Roseiflexus castenholzii DSM
           13941
          Length = 112

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 15/30 (50%), Positives = 17/30 (56%)

Query: 151 AHAALHQPLGESPLPRPCQGRTQSCRPCSH 180
           A  AL QPL  SP P PC     + RPC+H
Sbjct: 18  ARHALPQPLSISPAPIPCGDGLATHRPCAH 47


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.323    0.138    0.449 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,214,587
Number of Sequences: 1657284
Number of extensions: 8010717
Number of successful extensions: 11932
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 11927
Number of HSP's gapped (non-prelim): 5
length of query: 239
length of database: 575,637,011
effective HSP length: 98
effective length of query: 141
effective length of database: 413,223,179
effective search space: 58264468239
effective search space used: 58264468239
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 71 (32.7 bits)