GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000482-TA|BGIBMGA000482-PA|undefined
         (239 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1524|AAF47975.1| 1037|Drosophila melanogaster CG15207-P...    42   0.001
AE014298-1525|AAF47976.2| 1059|Drosophila melanogaster CG11203-P...    30   2.5  

>AE014298-1524|AAF47975.1| 1037|Drosophila melanogaster CG15207-PA
           protein.
          Length = 1037

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 17/22 (77%), Positives = 21/22 (95%)

Query: 32  HRVVFDESANEFFEADYIIVVR 53
           +RVVFDE+ NEFFEADYII++R
Sbjct: 945 NRVVFDETRNEFFEADYIILIR 966


>AE014298-1525|AAF47976.2| 1059|Drosophila melanogaster CG11203-PA
           protein.
          Length = 1059

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 4/29 (13%)

Query: 76  YQEP----EPGALSPPEGYKDMSLFNRDG 100
           YQ P    +  ALSPP+GYKD SL N  G
Sbjct: 8   YQPPIEFVDDAALSPPDGYKDSSLKNTLG 36


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.323    0.138    0.449 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,434,851
Number of Sequences: 52641
Number of extensions: 373217
Number of successful extensions: 654
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 652
Number of HSP's gapped (non-prelim): 2
length of query: 239
length of database: 24,830,863
effective HSP length: 83
effective length of query: 156
effective length of database: 20,461,660
effective search space: 3192018960
effective search space used: 3192018960
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 60 (28.3 bits)