Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000481-TA|BGIBMGA000481-PA|IPR013766|Thioredoxin domain,
IPR006863|Erv1/Alr, IPR012336|Thioredoxin-like fold,
IPR006662|Thioredoxin-related
(594 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 60 9e-10
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 59 2e-09
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 48 4e-06
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 40 0.001
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 37 0.009
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 35 0.028
SPAC3G6.08 |erv1||sulfhydryl oxidase |Schizosaccharomyces pombe|... 33 0.085
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 33 0.11
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 31 0.34
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 31 0.45
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 31 0.45
SPBC106.11c |plg7||phospholipase A2 |Schizosaccharomyces pombe|c... 28 3.2
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 27 5.6
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 27 7.4
SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase Ggt2|Schizosacc... 27 9.7
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 60.1 bits (139), Expect = 9e-10
Identities = 27/84 (32%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 37 SDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAV 96
S+ +E L +KNF K + + +L+V FY +CG+C+ P Y+ LAS++ ++ +
Sbjct: 31 SNTIE-LNSKNFRKFVKAKGPSLVV-FYAPWCGYCKKLVPTYQKLASNL---HSLLPVTA 85
Query: 97 IDCFVEENSEICRQFEVMAYPSIR 120
+DC ++N +C Q++V +P+I+
Sbjct: 86 VDCDADQNRAVCSQYQVQGFPTIK 109
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 58.8 bits (136), Expect = 2e-09
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 45 NKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVEEN 104
NK +L + L+V+FY +CGHC+A +P+Y++ A ++ K I L +DC E
Sbjct: 28 NKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADELE--KDGISLVEVDC--TEE 83
Query: 105 SEICRQFEVMAYPSIRYF 122
++C ++ + YP++ F
Sbjct: 84 GDLCSEYSIRGYPTLNVF 101
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 28 VDEQGLYRKSDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIAR 87
+ Q + + + +L NF+ + + +LV+FY +CGHC+ +P Y+ LA + +
Sbjct: 345 IKSQPIPESQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSD 404
Query: 88 WKKVIKLAVIDCFVEENSEICRQFEVMAYPSIRYFHEN 125
V+ +A ID + S + +P+I +F N
Sbjct: 405 DSNVV-VAKIDATENDIS-----VSISGFPTIMFFKAN 436
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 48.0 bits (109), Expect = 4e-06
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 37 SDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAV 96
S+ VE L + NF+K + +LV+FY +CG+C+ +P Y+ L +K + +
Sbjct: 140 SNVVE-LDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGK---VFKNEPNVEI 195
Query: 97 IDCFVEENSEICRQFEVMAYPSIRYF 122
+ + ++I R EV ++P+I++F
Sbjct: 196 VKINADVFADIGRLHEVASFPTIKFF 221
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 37 SDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAV 96
S VE+ + E + L++FY ++CGHC++ +P Y+ L + V+ +
Sbjct: 20 SGVVELQSLNELENTIRASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVL-IGK 78
Query: 97 IDCFVEENSEICRQFEVMAYPSIRYF 122
ID + +S++ ++ + +P++ +F
Sbjct: 79 ID--ADTHSDVADKYHITGFPTLIWF 102
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 61 VQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVEENSEICRQFEVMAYPSIR 120
+QFY+S C C S + A+A+ R + + +A I+C V + + C+Q+ + +P+
Sbjct: 303 IQFYSSECDDCDDVSTAWYAMAN---RMRGKLNVAHINCAVSKRA--CKQYSIQYFPTFL 357
Query: 121 YFHENYMKSNSNVGEKMNIADTAERLKN 148
+F E + + ++ AE N
Sbjct: 358 FFKEEAFVEYVGLPNEGDLVSFAEEAAN 385
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 36.7 bits (81), Expect = 0.009
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 50 KKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVEENSEICR 109
K + Q+ ++V F+ ++CG C+A +PK++ ++ + I V++ SEI
Sbjct: 12 KSIVCQDKLVVVDFFATWCGPCKAIAPKFEQFSNTYS------DATFIKVDVDQLSEIAA 65
Query: 110 QFEVMAYPSIRYFHENYMKSNSNVG 134
+ V A PS + ++N K VG
Sbjct: 66 EAGVHAMPSF-FLYKNGEKIEEIVG 89
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 35.1 bits (77), Expect = 0.028
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 59 LLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVEENSEICRQFEVMAYPS 118
L V Y +CG C+A SP + LAS A K V A ++ V+E +I V A P+
Sbjct: 22 LAVDCYADWCGPCKAISPLFSQLASKYASPKFV--FAKVN--VDEQRQIASGLGVKAMPT 77
Query: 119 IRYF 122
+F
Sbjct: 78 FVFF 81
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 223 ENSELAQVAGVKKIPSVVALENNLQATLLTPKQPTA 258
E ++A GVK +P+ V EN Q +LT P A
Sbjct: 62 EQRQIASGLGVKAMPTFVFFENGKQIDMLTGANPQA 97
>SPAC3G6.08 |erv1||sulfhydryl oxidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 182
Score = 33.5 bits (73), Expect = 0.085
Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 1/77 (1%)
Query: 411 WTLFHTLTVNAAQKPGSEGPKVLKAMHGYVKNFFGCTECASHFQA-MAARNRIFDVKENN 469
WT H + N + P + + F+ C CA + MA V
Sbjct: 87 WTFLHAMAANFPKNPTPTQQNDMSSFLYNFSKFYPCWSCAEDLRIWMAKYGNSPRVDSRE 146
Query: 470 KAVLWLWISHNEVNLRL 486
W+ +HN+VN RL
Sbjct: 147 SLCEWICEAHNDVNERL 163
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 33.1 bits (72), Expect = 0.11
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 27 DVDEQGLYRKSDQVEILTNKNFEKKLYGQNNALLVQFYNSYCG--HCRAFSPKYKALASD 84
++ E ++ S + L NF++ L+G + + + HC ++A+ S
Sbjct: 163 ELKEDQSWKHSSILRPLETLNFKRFLFGNEIMSKTRAFVMFVSLKHCEDCF-HWEAVWSS 221
Query: 85 IAR-WKKVIKLAVIDCFVEENSEICRQFEVMAYPSIRYF 122
I R + +K+A ++C +E E+C F + +P+ R F
Sbjct: 222 ITRNTDERLKMAQVNC--DEEKEMCNHFHIKKFPTFRVF 258
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 31.5 bits (68), Expect = 0.34
Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 12/167 (7%)
Query: 153 KLQAEQSMGRLIIAPSFKIESYTSYASALQSVPGDIDYIFLVFENDNSTIGSQIALXXXX 212
KL+AE+ G I +K E+ Y + PG D+I + + + + +
Sbjct: 62 KLKAERERGITIDIALWKFET-PKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGT 120
Query: 213 XXXXXXXX----XXENSELAQVAGVKKIPSVVALENNLQATLLTPKQPTAQNILEEIDRF 268
E++ LA GVK++ +VA+ N + T + Q + I++E F
Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQL--IVAV-NKMDTTGWS--QARFEEIVKETSNF 175
Query: 269 LKSKNYVFPPKYANMNDISDSSQQRTFVPTSDVAYYNDLEKTLKASL 315
+K F PK +S PT+++ +Y +K KA +
Sbjct: 176 IKKVG--FNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGV 220
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 31.1 bits (67), Expect = 0.45
Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 12/167 (7%)
Query: 153 KLQAEQSMGRLIIAPSFKIESYTSYASALQSVPGDIDYIFLVFENDNSTIGSQIALXXXX 212
KL+AE+ G I +K E+ Y + PG D+I + + + + +
Sbjct: 62 KLKAERERGITIDIALWKFET-PKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGT 120
Query: 213 XXXXXXXX----XXENSELAQVAGVKKIPSVVALENNLQATLLTPKQPTAQNILEEIDRF 268
E++ LA GVK++ +VA+ N + T + Q + I++E F
Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQL--IVAV-NKMDTTGWS--QARFEEIVKETSNF 175
Query: 269 LKSKNYVFPPKYANMNDISDSSQQRTFVPTSDVAYYNDLEKTLKASL 315
+K F PK +S PT+++ +Y +K KA +
Sbjct: 176 IKKVG--FNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGV 220
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 31.1 bits (67), Expect = 0.45
Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 12/167 (7%)
Query: 153 KLQAEQSMGRLIIAPSFKIESYTSYASALQSVPGDIDYIFLVFENDNSTIGSQIALXXXX 212
KL+AE+ G I +K E+ Y + PG D+I + + + + +
Sbjct: 62 KLKAERERGITIDIALWKFET-PKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGT 120
Query: 213 XXXXXXXX----XXENSELAQVAGVKKIPSVVALENNLQATLLTPKQPTAQNILEEIDRF 268
E++ LA GVK++ +VA+ N + T + Q + I++E F
Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQL--IVAV-NKMDTTGWS--QARFEEIVKETSNF 175
Query: 269 LKSKNYVFPPKYANMNDISDSSQQRTFVPTSDVAYYNDLEKTLKASL 315
+K F PK +S PT+++ +Y +K KA +
Sbjct: 176 IKKVG--FNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGV 220
>SPBC106.11c |plg7||phospholipase A2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 438
Score = 28.3 bits (60), Expect = 3.2
Identities = 10/36 (27%), Positives = 23/36 (63%)
Query: 282 NMNDISDSSQQRTFVPTSDVAYYNDLEKTLKASLHT 317
N+ND+ + F+ + D ++YN + +++K +L+T
Sbjct: 211 NINDLGTPDENLPFLCSVDSSFYNSVFQSMKGNLNT 246
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 27.5 bits (58), Expect = 5.6
Identities = 18/89 (20%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 116 YPSIRYFHENYMKSNSNVGEKMNIADTAERLKNQLIIKLQAEQSMGRLIIAPS--FKIES 173
+ ++ + Y K+N + + +N DTA + +L S+ I S F+++
Sbjct: 488 HAEVKLLRQKYQKTNEIISKMLNSQDTAVHRIIEFEDQLARLSSVRNNSIKQSTTFQVKK 547
Query: 174 YTSYASALQSVPGDIDYIFLVFENDNSTI 202
+S S +Q++ + Y+ + +N+T+
Sbjct: 548 -SSQKSTIQNLEEKVSYLQQFMDKNNATL 575
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 27.1 bits (57), Expect = 7.4
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 306 DLEKTLKASLHTEITRHKTLTGEPLQALLDYLDVIKTSFPFRANLGEYIMDLHATLAARN 365
++E TLK++ EI+ +T E L ++ D + +RA L EY+ + +A
Sbjct: 230 EIEATLKSA--AEISMGTEITEEDLDNIVMLADQVLELASYRAQLSEYLRNRMQAIAPNL 287
Query: 366 SWTGGEV 372
+ GE+
Sbjct: 288 TALVGEL 294
>SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase
Ggt2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 385 PVYITNLEYVGCKGSEPKYRG 405
P Y LE + KG EP YRG
Sbjct: 253 PAYAKTLEIIANKGIEPFYRG 273
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.133 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,671,897
Number of Sequences: 5004
Number of extensions: 109951
Number of successful extensions: 309
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 293
Number of HSP's gapped (non-prelim): 20
length of query: 594
length of database: 2,362,478
effective HSP length: 77
effective length of query: 517
effective length of database: 1,977,170
effective search space: 1022196890
effective search space used: 1022196890
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)
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