Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000481-TA|BGIBMGA000481-PA|IPR013766|Thioredoxin domain,
IPR006863|Erv1/Alr, IPR012336|Thioredoxin-like fold,
IPR006662|Thioredoxin-related
(594 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40381| Best HMM Match : Evr1_Alr (HMM E-Value=1.1e-14) 138 2e-32
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 71 2e-12
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 5e-12
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 60 7e-09
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 58 2e-08
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 54 3e-07
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 8e-07
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 1e-06
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 50 5e-06
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 47 4e-05
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 44 3e-04
SB_48404| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.007
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.010
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 39 0.010
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 37 0.053
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 36 0.070
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.1
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 31 2.0
SB_57288| Best HMM Match : Evr1_Alr (HMM E-Value=7.5e-06) 31 2.0
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 31 2.6
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 31 3.5
>SB_40381| Best HMM Match : Evr1_Alr (HMM E-Value=1.1e-14)
Length = 332
Score = 138 bits (333), Expect = 2e-32
Identities = 68/157 (43%), Positives = 91/157 (57%), Gaps = 5/157 (3%)
Query: 383 HEPVYITNLEYVGCKGSEPKYRGYTCGLWTLFHTLTVNAAQKPGSEGPKVLKAMH--GYV 440
H+ +E+ C+GS P+YRGY C LWTLFH LTVN + + P + +H Y+
Sbjct: 98 HDAPLPHKVEWQACQGSSPRYRGYPCTLWTLFHVLTVNCKKGDQNTPPGLRTLLHIREYI 157
Query: 441 KNFFGCTECASHFQAMAARNRIFD-VKENNKAVLWLWISHNEVNLRLAGDVTEDPEHPKI 499
++FF C+ C HF MA I D VK + A+LWLW +HN+ N RL D +EDP+ PKI
Sbjct: 158 RHFFTCSYCVKHFTKMA--EDIEDTVKSRDDAILWLWQAHNKANKRLHLDESEDPKFPKI 215
Query: 500 QFPSATKCPECRLAQGAWNLVAVYDYLQKMYGANNIK 536
QFPS C CR Q W V +L+ YG +NI+
Sbjct: 216 QFPSDDICANCRDDQSQWKEHMVLKFLKDHYGKDNIR 252
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 71.3 bits (167), Expect = 2e-12
Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 35 RKSDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKL 94
++ + V +LT KNF++ + N +LV+FY +CGHC+A +P+Y A + K IKL
Sbjct: 21 KEEEDVLVLTEKNFDEAV-AANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKL 79
Query: 95 AVIDCFVEENSEICRQFEVMAYPSIRYFHE 124
A +D E +++ +F+V YP+I++F +
Sbjct: 80 AKVDATAE--TKLGEKFQVQGYPTIKFFKD 107
Score = 45.6 bits (103), Expect = 1e-04
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 37 SDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAV 96
S V++L KNF++ ++ + V+FY +CGHC+ +P + L ++ +A
Sbjct: 383 SKPVKVLCGKNFDEVARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKYKDHADIV-VAK 441
Query: 97 IDCFVEENSEICRQFEVMAYPSIRYFHENYMKSNSNVGEKMN 138
+D E + +V ++P+I+YF + + N G ++
Sbjct: 442 MDSTANEVEGV----KVHSFPTIKYFPKEGEAVDYNGGRTLD 479
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 70.1 bits (164), Expect = 5e-12
Identities = 31/99 (31%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 26 DDVDEQGLYRKSDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDI 85
+D D+ ++ D V +L +KNF++ + +NN +LV+FY +CGHC++ +P+Y A +
Sbjct: 49 NDADDSDEVKEEDDVSVLNSKNFDRVIE-ENNIILVEFYAPWCGHCKSLAPEYAKAAKKM 107
Query: 86 ARWKKVIKLAVIDCFVEENSEICRQFEVMAYPSIRYFHE 124
+ A +D V S+I ++F+V YP+++ F +
Sbjct: 108 KLNDPPVPFAKMDATVA--SDIAQRFDVSGYPTLKIFRK 144
Score = 64.1 bits (149), Expect = 3e-10
Identities = 26/82 (31%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Query: 43 LTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVE 102
LT +NF + + + + +LV+F+ +CGHC+ +P+Y+ A ++ + I LA++D +E
Sbjct: 181 LTKENFTE-VVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDATIE 239
Query: 103 ENSEICRQFEVMAYPSIRYFHE 124
SE+ +++EV YP+++ F +
Sbjct: 240 --SELAQKYEVQGYPTLKVFRK 259
Score = 33.5 bits (73), Expect = 0.49
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 38 DQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVI 97
+ V ++ K F++ + +L++FY +CG A P +K L K ++ +A I
Sbjct: 525 EPVTVVVGKTFDEIVNDPKKDVLIEFYAPWCG--IALEPTFKKLGKHFRNDKNIV-IAKI 581
Query: 98 DCFVEENSEICRQFEVMAYPSIRYFHENYMKSN 130
D +++ + V +P+I YF + K N
Sbjct: 582 DATA---NDVPSTYAVEGFPTI-YFATSKDKKN 610
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 59.7 bits (138), Expect = 7e-09
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 37 SDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAV 96
S V L + NF+ + G++ +LV+F+ +CGHC+ +P+Y+ A + + + LA
Sbjct: 537 SSDVLDLGDSNFKSGVAGKD-IMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAK 595
Query: 97 IDCFVEENSEICRQFEVMAYPSIRYFHENYMKSN 130
+DC E + C ++ V YP+++ F M +
Sbjct: 596 VDC-TEAGKDTCSKYGVSGYPTLKIFRNGEMSKD 628
Score = 45.2 bits (102), Expect = 2e-04
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 9 FEIFLIALVTGAVVPTTDDVDEQGLYRKSD-QVEILTNKNFEKKLYGQNNALLVQFYNSY 67
F+ FL G++ P + + L +D V+++ +NF++ + +L++FY +
Sbjct: 835 FKQFLEDYFAGSLKP---HIKSEPLPESNDGPVKVVVGENFKEIVNDPTKDVLIEFYAPW 891
Query: 68 CGHCRAFSPKYKALASDIARWKKVI 92
CGHC++ PKY L + K ++
Sbjct: 892 CGHCKSLEPKYNELGEKLQDVKDIV 916
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 58.0 bits (134), Expect = 2e-08
Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 36 KSDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLA 95
K D VE LT+ NFEK++ + LV+F+ +CGHC+ +P++ A+++ K +K+
Sbjct: 78 KEDVVE-LTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATEL---KGKVKVG 133
Query: 96 VIDCFVEENSEICRQFEVMAYPSIRYFHENYMKSNS 131
+D V ++ +++V YP+I+ F S+S
Sbjct: 134 ALDATV--HTVTASRYQVQGYPTIKVFAAGIKNSHS 167
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 54.0 bits (124), Expect = 3e-07
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 43 LTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVE 102
LT NF++ + G+ AL V+FY +CGHC+ +P Y+ L + VI +A +D +
Sbjct: 27 LTKDNFDEVVNGEKFAL-VEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVI-IAKVD--AD 82
Query: 103 ENSEICRQFEVMAYPSIRYF 122
+ ++ +F+V +P+I+YF
Sbjct: 83 GDRDLGSRFDVKGFPTIKYF 102
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 52.8 bits (121), Expect = 8e-07
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 40 VEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDC 99
V + +KNF + +A +V FY +CG C F+PKY+ LA + K ++ A ++C
Sbjct: 435 VSEVNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKML---KGKVRAAKVNC 491
Query: 100 FVEENSEICRQFEVMAYPSIRYF 122
E++ +C + + +YP++R +
Sbjct: 492 --EQDYGLCSEANIHSYPTVRLY 512
Score = 41.1 bits (92), Expect = 0.002
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 37 SDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAV 96
S V L ++F + + V F+ +C C P+Y+ A K +
Sbjct: 283 SSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAARSFVG--KPVGFGT 340
Query: 97 IDCFVEENSEICRQFEVMAYPS 118
+DC V +S++C Q+ + +YP+
Sbjct: 341 VDCTV--HSQLCHQYNIRSYPT 360
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 52.0 bits (119), Expect = 1e-06
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 43 LTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVE 102
L +NF++ + + + +LV FY +C HC+ P+ + A+ +A K + + A +DC
Sbjct: 25 LNAQNFDQMIR-EKDIMLVDFYAPWCHHCQELLPQLEGAANALAA-KGLFQFAKVDCTDP 82
Query: 103 ENSEICRQFEVMAYPSIRYF 122
+ +C F++ YPS++ F
Sbjct: 83 RSKVLCDNFKIEGYPSVKLF 102
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 50.0 bits (114), Expect = 5e-06
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 43 LTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWK-KVIKLAVIDCFV 101
L + NFE + ++ +LV FY +C HC+ +P YK +A ++ ++LA +DC
Sbjct: 139 LDDSNFEPAVQ-KHKFVLVDFYAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAKVDCSA 197
Query: 102 EE--NSEICRQFEVMAYPSIRYFHE 124
+ C+++ V P+I FH+
Sbjct: 198 NNMATKKTCKKYNVKFLPTIYLFHD 222
Score = 33.1 bits (72), Expect = 0.65
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 43 LTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVE 102
L ++NF + + +N +LV FY +C C+ SP + A + ++ A + ++
Sbjct: 56 LNDQNFNETIK-KNEYVLVDFYAPWCSDCQRLSPLFDTAALQLRDNNPSLRFAKVIYSID 114
Query: 103 ENSEIC 108
E +C
Sbjct: 115 ECKVLC 120
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 47.2 bits (107), Expect = 4e-05
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 59 LLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVEENSEICRQFEVMAYPS 118
+LV FY +CGHC+ PKY+ A + A +DC + ++C + EV YP+
Sbjct: 167 VLVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRV-FAKLDC--TKFGDVCDKEEVNGYPT 223
Query: 119 IRYF 122
+RY+
Sbjct: 224 LRYY 227
Score = 43.2 bits (97), Expect = 6e-04
Identities = 19/88 (21%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 35 RKSDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKL 94
+ +V LT+++ ++ + N +LV ++ +CGHC P Y A + L
Sbjct: 47 KDDSKVVFLTDESHDEFIKSHEN-VLVMYFAPWCGHCNEMKPNYYKAAQVLHDEDANCNL 105
Query: 95 AVIDCFVEENSEICRQFEVMAYPSIRYF 122
A +DC ++ ++ ++ + YP+++ +
Sbjct: 106 AAVDC--TKHKDVAKKVALAGYPTVKLY 131
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 44.4 bits (100), Expect = 3e-04
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 20 AVVPTTDDVDEQGLYRKSDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYK 79
AV P +D E+ +V L + F+ +N ++LV FY +CGHC+A P+Y
Sbjct: 66 AVAPVKED--EKPWSDTPSEVVHLRDDMFDD-FVAKNPSVLVMFYAPWCGHCKAMKPEYV 122
Query: 80 ALASDIARWKKVIKLAVIDCFVEENSEICRQFEVMAYPS 118
A + + LA +D E + + ++F+V YP+
Sbjct: 123 DAAQTLKEQEIPGVLAAVDATKE--AALGKRFKVEGYPT 159
Score = 34.7 bits (76), Expect = 0.21
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 44 TNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVEE 103
T K+F KK +LV FY +CGHC+ P+ + A + K L++ D F
Sbjct: 204 TFKSFVKK----KKHVLVMFYAPWCGHCKKAKPELMSAAKH-HKDKNKRALSLRD-FDFS 257
Query: 104 NSEICRQFEVMAYPSI 119
N +C + ++AY ++
Sbjct: 258 NDTLCNRRRLIAYAAV 273
>SB_48404| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 39.5 bits (88), Expect = 0.007
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 411 WTLFHTLTVNAAQKPGSEGPKVLKAMHGYVKNFFGCTECASHFQAMAARNRIFDVKENNK 470
W HT+ KP + +K FF C ECA+H + + + D + +
Sbjct: 75 WGFLHTMAAYYPDKPTVNQQEDMKQFVTLFSKFFPCNECATHLREKINEHPV-DARSRHY 133
Query: 471 AVLWLWISHNEVN 483
W+ HN+VN
Sbjct: 134 LSQWMCHLHNDVN 146
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 39.1 bits (87), Expect = 0.010
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 35 RKSDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVI 92
RK + + LT+++F+ L + +LV FY +C C PKY+ A D+A+ K +
Sbjct: 19 RKENPIFELTDQDFDNFLKDKE-VMLVDFYAPWCSDCDNLRPKYEKAARDLAKEHKFV 75
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 39.1 bits (87), Expect = 0.010
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 37 SDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLA 95
S V L + NF+ + G++ +LV+F+ +CGHC+ +P+Y+ A + + + LA
Sbjct: 12 SSDVLDLGDSNFKSGVAGKD-IMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLA 69
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 36.7 bits (81), Expect = 0.053
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 23 PTTDDVDEQGLYRKSDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALA 82
P D +GL V ILT F+K + + V+FY +C HC +P ++ LA
Sbjct: 75 PEGKSKDSEGLSTSEAGVHILTKNTFDKHI--ELGLHFVKFYAPWCIHCIKLAPIWERLA 132
Query: 83 SD 84
D
Sbjct: 133 ED 134
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 36.3 bits (80), Expect = 0.070
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 43 LTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVE 102
+T +F+ + + +L+ FY +CG C F+P A +AR+ + I +
Sbjct: 522 VTTDSFDDIVINNDQDVLLVFYTPWCGMCINFAPVLLA----VARFFQDISQVSVTRIDA 577
Query: 103 ENSEICRQFEVMAYPSIRYFHENYMKSNSNVGEKMNIADTAERL 146
+ +++ V +YPSI F + +S++ N TA RL
Sbjct: 578 DQNDLPWNLTVSSYPSIILFPAG--RKDSSIAFPSNTPRTATRL 619
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 32.3 bits (70), Expect = 1.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 55 QNNALLVQFYNSYCGHCRAFSPKYKALA 82
++ +++ FY +CG CR PK+K +A
Sbjct: 29 KDKLVVIDFYAEWCGPCRQIKPKFKKMA 56
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 31.5 bits (68), Expect = 2.0
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 51 KLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVEENS-EICR 109
K N + F ++CG CR PK++ +A + K +K A +D V+ NS E+ R
Sbjct: 6 KFLKDNEVAAIDFTATWCGPCRMIGPKFEEMAKEF----KGVKCAKVD--VDVNSVEVLR 59
>SB_57288| Best HMM Match : Evr1_Alr (HMM E-Value=7.5e-06)
Length = 83
Score = 31.5 bits (68), Expect = 2.0
Identities = 13/44 (29%), Positives = 18/44 (40%)
Query: 411 WTLFHTLTVNAAQKPGSEGPKVLKAMHGYVKNFFGCTECASHFQ 454
W HT+ KP + +K FF C ECA+H +
Sbjct: 38 WGFLHTMAAYYPDKPTVNQQEDMKQFVTLFSKFFPCNECATHLR 81
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 31.1 bits (67), Expect = 2.6
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 74 FSPKYKALASDIAR--WKKVIKLAVIDCFVEENSEICRQFEVMAYPSIRYFHENYMKSNS 131
FS K + L + R KK ++ A +C+ E +E+ R E + + H N +
Sbjct: 922 FSEKLQCLEKGVTRNTRKKDLEDATANCY--ELTEVKRAMENKHFEQMEELHSNLNNALE 979
Query: 132 NVGEKMNIADTAERLKNQLIIKLQ 155
N +K + + KNQL KL+
Sbjct: 980 NAAKKDKDFEAIRKDKNQLESKLE 1003
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 30.7 bits (66), Expect = 3.5
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 45 NKNFEKKLYGQNNALLV-QFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVEE 103
+ F +L L+V F S+CG C++ +P Y L+ ++K+ + L ID V+
Sbjct: 15 DSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGLSE---KYKQAVFLK-ID--VDV 68
Query: 104 NSEICRQFEVMAYPSIRYF 122
E+ + V A P+ ++F
Sbjct: 69 CQELAAKQGVTAMPTFQFF 87
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.133 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,524,861
Number of Sequences: 59808
Number of extensions: 727127
Number of successful extensions: 1676
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1638
Number of HSP's gapped (non-prelim): 31
length of query: 594
length of database: 16,821,457
effective HSP length: 86
effective length of query: 508
effective length of database: 11,677,969
effective search space: 5932408252
effective search space used: 5932408252
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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