Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000481-TA|BGIBMGA000481-PA|IPR013766|Thioredoxin domain,
IPR006863|Erv1/Alr, IPR012336|Thioredoxin-like fold,
IPR006662|Thioredoxin-related
(594 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g01270.1 68415.m00040 thioredoxin family protein low similari... 98 2e-20
At1g15020.2 68414.m01795 thioredoxin family protein low similari... 97 2e-20
At1g15020.1 68414.m01794 thioredoxin family protein low similari... 97 2e-20
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 73 4e-13
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 73 4e-13
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 59 7e-09
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 59 7e-09
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 58 1e-08
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 58 2e-08
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 57 3e-08
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 56 7e-08
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 54 3e-07
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 54 3e-07
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 50 3e-06
At4g27080.1 68417.m03893 thioredoxin family protein contains Pfa... 46 5e-05
At1g49880.1 68414.m05592 Erv1/Alr family protein similar to SP|Q... 45 2e-04
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 38 0.019
At3g16110.1 68416.m02035 thioredoxin family protein similar to p... 38 0.025
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 37 0.033
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 37 0.033
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 37 0.033
At3g21190.1 68416.m02678 expressed protein contains Pfam PF03138... 37 0.033
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 37 0.033
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 37 0.043
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 37 0.043
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 37 0.043
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 37 0.043
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 36 0.057
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 35 0.13
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 34 0.23
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 33 0.41
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 33 0.41
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 33 0.54
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 33 0.54
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 32 0.94
At1g51630.1 68414.m05817 expressed protein contains Pfam PF03138... 32 0.94
At1g50950.1 68414.m05728 thioredoxin-related contains weak hit t... 32 0.94
At5g23490.1 68418.m02756 expressed protein 32 1.2
At1g07700.3 68414.m00829 thioredoxin family protein low similari... 32 1.2
At1g07700.1 68414.m00828 thioredoxin family protein low similari... 32 1.2
At3g24730.1 68416.m03105 mitosis DIM1 family protein contains Pf... 31 1.6
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 31 1.6
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 31 2.2
At3g50380.1 68416.m05511 expressed protein 30 5.0
At3g25830.1 68416.m03218 myrcene/ocimene synthase, putative simi... 30 5.0
At3g25820.1 68416.m03215 myrcene/ocimene synthase, putative simi... 30 5.0
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 30 5.0
At2g39370.1 68415.m04832 expressed protein 30 5.0
At5g39930.1 68418.m04842 expressed protein ; expression supporte... 29 6.6
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 29 6.6
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 29 6.6
At5g61970.1 68418.m07778 signal recognition particle-related / S... 29 8.7
At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR... 29 8.7
At3g06530.1 68416.m00757 BAP28-related similar to Protein BAP28 ... 29 8.7
>At2g01270.1 68415.m00040 thioredoxin family protein low similarity
to quiescin [Homo sapiens] GI:13257405; contains Pfam
profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr
family
Length = 495
Score = 97.9 bits (233), Expect = 2e-20
Identities = 59/170 (34%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 393 YVGCKGSEPKYRGYTCGLWTLFHTLTVNAAQKPGSEGPKVLKAMHGYVKNFFGCTECASH 452
Y+ C+GS+ RG++CGLW L H+L+V E + +V NFF C EC H
Sbjct: 284 YMFCRGSKNDTRGFSCGLWVLMHSLSVRIED---GESHFAFTTICDFVNNFFMCDECRLH 340
Query: 453 FQAMAARNRIFDVKENNKAVLWLWISHNEVNLRLAGDV----TEDPEHPKIQFPSATKCP 508
F M + K+ VLW+W +HN+VN RL D T DP+ PKI +P CP
Sbjct: 341 FNDMCLSVKT-PFKKARDFVLWVWSTHNKVNERLLKDEASLGTGDPKFPKIIWPPKELCP 399
Query: 509 ECRLAQG----AWNLVAVYDYLQKMYGANNI-----KDVRRAQVSSASST 549
C L+ W+ VY +L+ YG + K V R++ + S+T
Sbjct: 400 LCYLSSNQKSIEWDHEHVYKFLKNYYGPKLVSLYKEKSVSRSKEETVSAT 449
Score = 42.3 bits (95), Expect = 9e-04
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 36 KSDQVEILTNKNFEKKLYGQN-NALLVQFYNSYCGHCRAFSPKYKALA----SDIARWKK 90
+ D+ L NF+ L +V+F+ +C CR + P Y+ +A A
Sbjct: 33 QKDKAVELNTTNFDSVLKDTPAKYAVVEFFAHWCPACRNYKPHYEKVARLFNGPDAIHPG 92
Query: 91 VIKLAVIDCFVEENSEICRQFEVMAYPSIRY-----FHENYMKSNSNVGEKMNIAD--TA 143
++ + +DC ++ N+++C +F V YP + + F + + E + I D TA
Sbjct: 93 IVLMTRVDCAMKTNTKLCDKFSVSHYPMLFWGPPTKFVSGSWEPKKDKSEILVIDDGRTA 152
Query: 144 ERLKNQLIIKLQAEQSMGRLIIAPSFKIESYTSYASALQSV 184
ERL N + ++ + + + + T Y Q+V
Sbjct: 153 ERLLNWINKQIGSSYGLDDQKFKNEHALSNLTDYNQISQAV 193
>At1g15020.2 68414.m01795 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 528
Score = 97.5 bits (232), Expect = 2e-20
Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 12/147 (8%)
Query: 393 YVGCKGSEPKYRGYTCGLWTLFHTLTVNAAQKPGSEGPKVLKAMHGYVKNFFGCTECASH 452
Y C+GS+ + RG++CGLW L H+L+V E A+ ++ NFF C +C H
Sbjct: 289 YRFCRGSKNETRGFSCGLWVLMHSLSVRIED---GESQFAFTAICDFINNFFMCDDCRRH 345
Query: 453 FQAMAARNRIFDVKENNKAVLWLWISHNEVNLRLAGDV----TEDPEHPKIQFPSATKCP 508
F M + K+ LWLW +HN+VN RL D T DP+ PK+ +P CP
Sbjct: 346 FHDMCLSVKT-PFKKARDIALWLWSTHNKVNERLKKDEDSLGTGDPKFPKMIWPPKQLCP 404
Query: 509 ECRLAQGA----WNLVAVYDYLQKMYG 531
C L+ W+ VY +L+K YG
Sbjct: 405 SCYLSSTEKNIDWDHDQVYKFLKKYYG 431
Score = 38.3 bits (85), Expect = 0.014
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 60 LVQFYNSYCGHCRAFSPKYKALASDI----ARWKKVIKLAVIDCFVEENSEICRQFEVMA 115
+++F+ +C CR + P Y+ +A A + V+ + +DC ++ N ++C +F +
Sbjct: 64 VLEFFAHWCPACRNYKPHYEKVARLFNGADAVYPGVVLMTRVDCAIKMNVKLCDKFSINH 123
Query: 116 YPSI 119
YP +
Sbjct: 124 YPML 127
>At1g15020.1 68414.m01794 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 502
Score = 97.5 bits (232), Expect = 2e-20
Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 12/147 (8%)
Query: 393 YVGCKGSEPKYRGYTCGLWTLFHTLTVNAAQKPGSEGPKVLKAMHGYVKNFFGCTECASH 452
Y C+GS+ + RG++CGLW L H+L+V E A+ ++ NFF C +C H
Sbjct: 289 YRFCRGSKNETRGFSCGLWVLMHSLSVRIED---GESQFAFTAICDFINNFFMCDDCRRH 345
Query: 453 FQAMAARNRIFDVKENNKAVLWLWISHNEVNLRLAGDV----TEDPEHPKIQFPSATKCP 508
F M + K+ LWLW +HN+VN RL D T DP+ PK+ +P CP
Sbjct: 346 FHDMCLSVKT-PFKKARDIALWLWSTHNKVNERLKKDEDSLGTGDPKFPKMIWPPKQLCP 404
Query: 509 ECRLAQGA----WNLVAVYDYLQKMYG 531
C L+ W+ VY +L+K YG
Sbjct: 405 SCYLSSTEKNIDWDHDQVYKFLKKYYG 431
Score = 38.3 bits (85), Expect = 0.014
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 60 LVQFYNSYCGHCRAFSPKYKALASDI----ARWKKVIKLAVIDCFVEENSEICRQFEVMA 115
+++F+ +C CR + P Y+ +A A + V+ + +DC ++ N ++C +F +
Sbjct: 64 VLEFFAHWCPACRNYKPHYEKVARLFNGADAVYPGVVLMTRVDCAIKMNVKLCDKFSINH 123
Query: 116 YPSI 119
YP +
Sbjct: 124 YPML 127
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 73.3 bits (172), Expect = 4e-13
Identities = 32/100 (32%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Query: 37 SDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAV 96
+D V +LT+ +FEK++ G++ LV+FY +CGHC+ +P+Y+ L + + K V+ +A
Sbjct: 22 ADDVVVLTDDSFEKEV-GKDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVL-IAK 79
Query: 97 IDCFVEENSEICRQFEVMAYPSIRYFHENYMKSNSNVGEK 136
+DC +E +C ++ V YP+I++F + ++ G +
Sbjct: 80 VDC--DEQKSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPR 117
Score = 54.8 bits (126), Expect = 2e-07
Identities = 23/83 (27%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 40 VEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDC 99
V +LT NF++ + QN +LV+FY +CGHC++ +P Y+ +A+ + + ++ + +A +D
Sbjct: 143 VVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVAT-VFKQEEGVVIANLD- 200
Query: 100 FVEENSEICRQFEVMAYPSIRYF 122
+ + + ++ V +P++++F
Sbjct: 201 -ADAHKALGEKYGVSGFPTLKFF 222
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 73.3 bits (172), Expect = 4e-13
Identities = 32/100 (32%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Query: 37 SDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAV 96
+D V +LT+ +FEK++ G++ LV+FY +CGHC+ +P+Y+ L + + K V+ +A
Sbjct: 22 ADDVVVLTDDSFEKEV-GKDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVL-IAK 79
Query: 97 IDCFVEENSEICRQFEVMAYPSIRYFHENYMKSNSNVGEK 136
+DC +E +C ++ V YP+I++F + ++ G +
Sbjct: 80 VDC--DEQKSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPR 117
Score = 54.8 bits (126), Expect = 2e-07
Identities = 23/83 (27%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 40 VEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDC 99
V +LT NF++ + QN +LV+FY +CGHC++ +P Y+ +A+ + + ++ + +A +D
Sbjct: 143 VVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVAT-VFKQEEGVVIANLD- 200
Query: 100 FVEENSEICRQFEVMAYPSIRYF 122
+ + + ++ V +P++++F
Sbjct: 201 -ADAHKALGEKYGVSGFPTLKFF 222
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 59.3 bits (137), Expect = 7e-09
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 43 LTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVE 102
L + NF + +++ ++V+FY +CGHC+ +P+Y+ AS ++ + LA ID E
Sbjct: 35 LDHTNFTDTI-NKHDFIVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEE 93
Query: 103 ENSEICRQFEVMAYPSIRYF 122
N E Q+EV +P+I+ F
Sbjct: 94 TNREFATQYEVQGFPTIKIF 113
Score = 34.3 bits (75), Expect = 0.23
Identities = 19/86 (22%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 37 SDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAV 96
++ V+++ + + + + +L++FY +CGHC+ +P +A V+ +A
Sbjct: 373 NEPVKVVVSDSLDDIVLNSGKNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDSSVV-IAK 431
Query: 97 IDCFVEENSEICRQFEVMAYPSIRYF 122
+D + + F+V +P+I YF
Sbjct: 432 LDATANDFPK--DTFDVKGFPTI-YF 454
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 59.3 bits (137), Expect = 7e-09
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 43 LTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVE 102
L + NF + +++ ++V+FY +CGHC+ +P+Y+ AS ++ + LA ID E
Sbjct: 35 LDHTNFTDTI-NKHDFIVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEE 93
Query: 103 ENSEICRQFEVMAYPSIRYF 122
N E Q+EV +P+I+ F
Sbjct: 94 TNREFATQYEVQGFPTIKIF 113
Score = 34.3 bits (75), Expect = 0.23
Identities = 19/86 (22%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 37 SDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAV 96
++ V+++ + + + + +L++FY +CGHC+ +P +A V+ +A
Sbjct: 373 NEPVKVVVSDSLDDIVLNSGKNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDSSVV-IAK 431
Query: 97 IDCFVEENSEICRQFEVMAYPSIRYF 122
+D + + F+V +P+I YF
Sbjct: 432 LDATANDFPK--DTFDVKGFPTI-YF 454
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 58.4 bits (135), Expect = 1e-08
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 33 LYRKSDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVI 92
LY S V LT NF+ K+ N +LV+F+ +CGHC++ +P ++ +AS + K +
Sbjct: 23 LYGSSSPVLQLTPSNFKSKVLNSNGVVLVEFFAPWCGHCQSLTPTWEKVASTL---KGIA 79
Query: 93 KLAVIDCFVEENSEICRQFEVMAYPSIRYF 122
+A ID + + + + + V +P+I+ F
Sbjct: 80 TVAAID--ADAHKSVSQDYGVRGFPTIKVF 107
Score = 49.6 bits (113), Expect = 6e-06
Identities = 23/80 (28%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 43 LTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVE 102
L + NF++ + +V+F+ +CGHC+ +P++K A+++ K +KL ++C E
Sbjct: 168 LNSSNFDELVTESKELWIVEFFAPWCGHCKKLAPEWKKAANNL---KGKVKLGHVNCDAE 224
Query: 103 ENSEICRQFEVMAYPSIRYF 122
++ I +F+V +P+I F
Sbjct: 225 QS--IKSRFKVQGFPTILVF 242
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 58.0 bits (134), Expect = 2e-08
Identities = 22/78 (28%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 43 LTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVE 102
L + NF + + +++ ++V+FY +CGHC+ +P+Y+ AS+++ + LA ID E
Sbjct: 34 LDHSNFTETI-SKHDFIVVEFYAPWCGHCQKLAPEYEKAASELSSHNPPLALAKIDASEE 92
Query: 103 ENSEICRQFEVMAYPSIR 120
N E ++++ +P+++
Sbjct: 93 ANKEFANEYKIQGFPTLK 110
Score = 36.3 bits (80), Expect = 0.057
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 37 SDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAV 96
++ V+++ ++ + ++ +L++FY +CGHC+ +P +A VI +A
Sbjct: 371 NEPVKVVVAESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVALSFQNDPSVI-IAK 429
Query: 97 IDCFVEENSEICRQFEVMAYPSIRYF 122
+D N F+V +P+I YF
Sbjct: 430 LD--ATANDIPSDTFDVKGFPTI-YF 452
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 57.2 bits (132), Expect = 3e-08
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 33 LYRKSDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVI 92
LY S V LT NF+ K+ N +LV+F+ +CGHC+A +P ++ +A+ + K V
Sbjct: 25 LYGSSSPVVQLTASNFKSKVLNSNGVVLVEFFAPWCGHCKALTPTWEKVANIL---KGVA 81
Query: 93 KLAVIDCFVEENSEICRQFEVMAYPSIRYF 122
+A ID + + + + + +P+I+ F
Sbjct: 82 TVAAID--ADAHQSAAQDYGIKGFPTIKVF 109
Score = 52.0 bits (119), Expect = 1e-06
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 43 LTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVE 102
L NF+ + N +V+F+ +CGHC+ +P++K A ++ + +KL ++C VE
Sbjct: 167 LNASNFDDLVIESNELWIVEFFAPWCGHCKKLAPEWKRAAKNL---QGKVKLGHVNCDVE 223
Query: 103 ENSEICRQFEVMAYPSIRYFHENYMKSNSNVGEKMNIADTAERLKNQLI 151
++ I +F+V +P+I F + KS+ E A E ++L+
Sbjct: 224 QS--IMSRFKVQGFPTILVFGPD--KSSPYPYEGARSASAIESFASELV 268
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 56.0 bits (129), Expect = 7e-08
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 40 VEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDC 99
V +LT NF + G N+ +V+FY +CG C+A +P+Y A A+++ K + LA ID
Sbjct: 101 VAVLTKDNFTE-FVGNNSFAMVEFYAPWCGACQALTPEYAAAATEL---KGLAALAKID- 155
Query: 100 FVEENSEICRQFEVMAYPSIRYFHENYMK 128
E ++ +++E+ +P++ F + M+
Sbjct: 156 -ATEEGDLAQKYEIQGFPTVFLFVDGEMR 183
Score = 40.3 bits (90), Expect = 0.004
Identities = 13/42 (30%), Positives = 27/42 (64%)
Query: 40 VEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKAL 81
V+++ NF++ + ++ +L++ Y +CGHC++F P Y L
Sbjct: 439 VKVIVGNNFDEIVLDESKDVLLEIYAPWCGHCQSFEPIYNKL 480
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 54.0 bits (124), Expect = 3e-07
Identities = 27/83 (32%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 40 VEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDC 99
V ++ +NF + N +LV+FY +CGHC++ +P+Y A A+++ + + LA ID
Sbjct: 105 VVVIKERNFTDVIEN-NQYVLVEFYAPWCGHCQSLAPEYAAAATELK--EDGVVLAKIDA 161
Query: 100 FVEENSEICRQFEVMAYPSIRYF 122
EEN E+ +++ V +P++ +F
Sbjct: 162 -TEEN-ELAQEYRVQGFPTLLFF 182
Score = 41.9 bits (94), Expect = 0.001
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 35 RKSDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDI 85
+ + V+I+ NF++ + + +L++ Y +CGHC+A P Y LA +
Sbjct: 438 KNDEDVKIVVGDNFDEIVLDDSKDVLLEVYAPWCGHCQALEPMYNKLAKHL 488
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 54.0 bits (124), Expect = 3e-07
Identities = 27/83 (32%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 40 VEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDC 99
V ++ +NF + N +LV+FY +CGHC++ +P+Y A A+++ + + LA ID
Sbjct: 105 VVVIKERNFTDVIEN-NQYVLVEFYAPWCGHCQSLAPEYAAAATELK--EDGVVLAKIDA 161
Query: 100 FVEENSEICRQFEVMAYPSIRYF 122
EEN E+ +++ V +P++ +F
Sbjct: 162 -TEEN-ELAQEYRVQGFPTLLFF 182
Score = 41.9 bits (94), Expect = 0.001
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 35 RKSDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDI 85
+ + V+I+ NF++ + + +L++ Y +CGHC+A P Y LA +
Sbjct: 438 KNDEDVKIVVGDNFDEIVLDDSKDVLLEVYAPWCGHCQALEPMYNKLAKHL 488
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 50.4 bits (115), Expect = 3e-06
Identities = 23/81 (28%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 43 LTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVE 102
LT+ NF+ + + + V FY +CGHC+ +P+ A A +A+ K+ I +A ++ +
Sbjct: 37 LTDSNFDSAI-STFDCIFVDFYAPWCGHCKRLNPELDAAAPILAKLKQPIVIAKLN--AD 93
Query: 103 ENSEICRQFEVMAYPSIRYFH 123
+ S + R+ E+ A+P++ ++
Sbjct: 94 KYSRLARKIEIDAFPTLMLYN 114
>At4g27080.1 68417.m03893 thioredoxin family protein contains Pfam
PF00085: Thioredoxin
Length = 480
Score = 46.4 bits (105), Expect = 5e-05
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 19 GAVVPTTDDVDEQGLYRKSDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKY 78
G V+ + DE G D V LT +NF+ + Q L+V FY +C C P +
Sbjct: 123 GEVLSLINHGDETGEEIVEDSVP-LTGRNFDTFTH-QFPILVVNFYAPWCYWCNLLKPSW 180
Query: 79 KALASDIA-RWKKVIK----LAVIDCFVEENSEICRQFEVMAYPSIRYFHE 124
+ A I R+ + LA +DC E ++CR+ + YPSIR F +
Sbjct: 181 EKAAKQIKERYDPEMDGRVILAKVDCTQE--GDLCRRNHIQGYPSIRIFRK 229
>At1g49880.1 68414.m05592 Erv1/Alr family protein similar to
SP|Q63042 Augmenter of liver regeneration {Rattus
norvegicus}; contains Pfam profile PF04777: Erv1 / Alr
family
Length = 191
Score = 44.8 bits (101), Expect = 2e-04
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 411 WTLFHTLTVNAAQKPGSEGPKVLKAMHGYVKNFFGCTECASHFQAMAARNRIFDVKENNK 470
WT HTL +KP + K +K + + + C ECA HF+ + R+ +
Sbjct: 84 WTFLHTLAAQYPEKPTRQQKKDVKELMTILSRMYPCRECADHFKEI-LRSNPAQAGSQEE 142
Query: 471 AVLWLWISHNEVNLRL 486
WL HN VN L
Sbjct: 143 FSQWLCHVHNTVNRSL 158
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 37.9 bits (84), Expect = 0.019
Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 44 TNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVEE 103
T +F+ L + +LV FY ++CG C+ P + ++++ K I +AV+ E+
Sbjct: 64 TFNSFDDLLQNSDKPVLVDFYATWCGPCQLMVP----ILNEVSETLKDI-IAVVKIDTEK 118
Query: 104 NSEICRQFEVMAYPSIRYFHENYMKSNSNVGEKMNIADTAERLKNQLIIK 153
+ ++++ A P+ F + + N ER++N L +K
Sbjct: 119 YPSLANKYQIEALPTFILFKDGKLWDRFEGALPAN--QLVERIENSLQVK 166
>At3g16110.1 68416.m02035 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 534
Score = 37.5 bits (83), Expect = 0.025
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 36 KSDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLA 95
K+ ++ + N + K+L N ++V Y +C P++ A+D+ + +A
Sbjct: 72 KAQRIVVELNGDNTKRLIDGNEYVMVLGYAPWCARSAELMPRFAEAATDLKEIGSSVLMA 131
Query: 96 VIDCFVEENSEICRQFEVMAYPSIRYF 122
ID E S++ Q E+ +P++ F
Sbjct: 132 KID--GERYSKVASQLEIKGFPTLLLF 156
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 37.1 bits (82), Expect = 0.033
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 38 DQVEILTNKNFEKKLYGQNNAL-LVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAV 96
+ V+I + + F L G L +V+FY ++C CRA PK L ++ L V
Sbjct: 104 NMVDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPK---LCKTAVEHPDIVFLKV 160
Query: 97 IDCFVEENSEICRQFEVMAYPSIRYF 122
+EN +C+ V P ++
Sbjct: 161 ---NFDENKPMCKSLNVRVLPFFHFY 183
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 37.1 bits (82), Expect = 0.033
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 38 DQVEILTNKNFEKKLYGQNNAL-LVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAV 96
+ V+I + + F L G L +V+FY ++C CRA PK L ++ L V
Sbjct: 104 NMVDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPK---LCKTAVEHPDIVFLKV 160
Query: 97 IDCFVEENSEICRQFEVMAYPSIRYF 122
+EN +C+ V P ++
Sbjct: 161 ---NFDENKPMCKSLNVRVLPFFHFY 183
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 37.1 bits (82), Expect = 0.033
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 38 DQVEILTNKNFEKKLYGQNNAL-LVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAV 96
+ ++I + + F L + L +V FY ++CG CRA PK A K+ +
Sbjct: 94 NMIDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTA------KEHPNILF 147
Query: 97 IDCFVEENSEICRQFEVMAYPSIRYFH 123
+ +EN +C+ V P YFH
Sbjct: 148 LKVNFDENKSLCKSLNVKVLP---YFH 171
>At3g21190.1 68416.m02678 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown;
Length = 422
Score = 37.1 bits (82), Expect = 0.033
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 233 VKKIPSVVALENNLQATLLTPKQPTAQNILEEIDRFLKSKNYVFPPKYANMNDISDSSQQ 292
VKK+P V+L N A + P + T I E ID KSK + Y ++ SSQ
Sbjct: 159 VKKLPEEVSLRN--MAIVKVPTRVTEDYIKEHIDPIFKSKGNIRVASYFPSVNLRKSSQD 216
Query: 293 RTFVPTSDVAYYNDLE 308
P + +A + LE
Sbjct: 217 GETDPVACLAMFGSLE 232
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 37.1 bits (82), Expect = 0.033
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 59 LLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVEENSEICRQFEVMAYPS 118
+++ Y +CG C+ +PKYKAL+ ++ V+ L +DC +N + ++ + P+
Sbjct: 90 VVLDMYTQWCGPCKVIAPKYKALSE---KYDDVVFLK-LDC-NPDNRPLAKELGIRVVPT 144
Query: 119 IRYFHEN 125
+ +N
Sbjct: 145 FKILKDN 151
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 36.7 bits (81), Expect = 0.043
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 35 RKSDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKL 94
R S E+ T +++E + +LV+FY S+CG CR +A D A KL
Sbjct: 64 RDSRAAEV-TQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAG-----KL 117
Query: 95 AVIDCFVEENSEICRQFEVMAYPSIRYFHENYMKSNSNVG 134
+ + + ++E+ A P + F +N K S +G
Sbjct: 118 NCYLLNADNDLPVAEEYEIKAVPVVLLF-KNGEKRESIMG 156
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 36.7 bits (81), Expect = 0.043
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 39 QVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVID 98
+V LT + F K+ ++ A V+F +C HC+ ++ L + I++ +D
Sbjct: 26 EVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAM-EGDDEIEVGEVD 84
Query: 99 CFVEENSEICRQFEVMAYPSIRYFH 123
C + +C + E+ +YP+ F+
Sbjct: 85 C--GTSRAVCTKVEIHSYPTFMLFY 107
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 36.7 bits (81), Expect = 0.043
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 39 QVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVID 98
+V LT + F K+ ++ A V+F +C HC+ ++ L + I++ +D
Sbjct: 26 EVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAM-EGDDEIEVGEVD 84
Query: 99 CFVEENSEICRQFEVMAYPSIRYFH 123
C + +C + E+ +YP+ F+
Sbjct: 85 C--GTSRAVCTKVEIHSYPTFMLFY 107
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 36.7 bits (81), Expect = 0.043
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 39 QVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVID 98
+V LT + F K+ ++ A V+F +C HC+ ++ L + I++ +D
Sbjct: 26 EVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAM-EGDDEIEVGEVD 84
Query: 99 CFVEENSEICRQFEVMAYPSIRYFH 123
C + +C + E+ +YP+ F+
Sbjct: 85 C--GTSRAVCTKVEIHSYPTFMLFY 107
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 36.3 bits (80), Expect = 0.057
Identities = 15/67 (22%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 59 LLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVEENSEICRQFEVMAYPS 118
+++ Y +CG C+ +PKYK L+ +++ ++ L +DC ++N + ++ + P+
Sbjct: 100 VVLDMYTQWCGPCKVIAPKYKELSE---KYQDMVFLK-LDC-NQDNKPLAKELGIRVVPT 154
Query: 119 IRYFHEN 125
+ +N
Sbjct: 155 FKILKDN 161
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 35.1 bits (77), Expect = 0.13
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 39 QVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVID 98
+V L++ ++ K+ + +LV+F+ +CG CR P LA D A K K+
Sbjct: 87 EVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKIN--- 143
Query: 99 CFVEENSEICRQFEVMAYPSIRYFHENYMKSNSNVG 134
+E+ ++ + + P++ F + K +S +G
Sbjct: 144 --TDESPNTANRYGIRSVPTVIIF-KGGEKKDSIIG 176
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 34.3 bits (75), Expect = 0.23
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 50 KKLYGQNNALLVQFYNS-YCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVEENSEIC 108
+KLY ++ +++ Y S CG CR P L + + + ID +EE+ EI
Sbjct: 435 RKLYHESPRVILVLYTSPTCGPCRTLKP---ILNKVVDEYNHDVHFVEID--IEEDQEIA 489
Query: 109 RQFEVMAYPSIRYF-HENYMKSNSNVGEKMNIADTAERLK 147
+M P +++F ++ +++ S V K + E K
Sbjct: 490 EAAGIMGTPCVQFFKNKEMLRTISGVKMKKEYREFIEANK 529
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 33.5 bits (73), Expect = 0.41
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 44 TNKNFEKKLYGQNNA---LLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCF 100
T +++ +KL N + +++ F ++C CR +P + LA KK + +
Sbjct: 12 TVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLA------KKHLDVVFFKVD 65
Query: 101 VEENSEICRQFEVMAYPSIRYFHENYMKSNSNVGEKMNIADTAERLK 147
V+E + + +F+V A P+ + E +K K I E+ K
Sbjct: 66 VDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHK 112
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 33.5 bits (73), Expect = 0.41
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 56 NNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVEENSEICRQFEVMA 115
N L+V F S+CG CR P A+A K + + V+E ++ ++F V A
Sbjct: 47 NKLLVVDFSASWCGPCRMIEPAIHAMAD------KFNDVDFVKLDVDELPDVAKEFNVTA 100
Query: 116 YPS 118
P+
Sbjct: 101 MPT 103
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 33.1 bits (72), Expect = 0.54
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 44 TNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVEE 103
T +FE L + +LV +Y ++CG C+ P + ++++ K K+ V+ E+
Sbjct: 69 TFDSFEDLLVNSDKPVLVDYYATWCGPCQFMVP----ILNEVSETLK-DKIQVVKIDTEK 123
Query: 104 NSEICRQFEVMAYPSIRYFHE 124
I ++++ A P+ F +
Sbjct: 124 YPSIANKYKIEALPTFILFKD 144
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 33.1 bits (72), Expect = 0.54
Identities = 17/87 (19%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 36 KSDQVEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLA 95
K+ ++ + N ++ K++ N ++V Y +C P++ A+ + + +A
Sbjct: 74 KAQRIVLELNGDYTKRVIDGNEFVMVLGYAPWCARSAELMPRFAEAATALKEIGSSVLMA 133
Query: 96 VIDCFVEENSEICRQFEVMAYPSIRYF 122
ID + S+I + E+ +P++ F
Sbjct: 134 KID--GDRYSKIASELEIKGFPTLLLF 158
Score = 30.7 bits (66), Expect = 2.9
Identities = 21/109 (19%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 43 LTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVE 102
+ K F+ + +L++ + +C +C A S + + LA ++ ++ A ID
Sbjct: 422 VVGKTFDGLVLNSRENVLLEVHTPWCVNCEALSKQIEKLAKHFKGFENLV-FARIDASAN 480
Query: 103 ENSEICRQFEVMAYPSIRYFHENYMKSNSNVGEKMNIADTAERLKNQLI 151
E++++ Q + YP I + + + K++ D A + +L+
Sbjct: 481 EHTKL--QVD-DKYPIILLYKSGEKEKPLKLSTKLSAKDIAVFINEELL 526
>At1g59730.1 68414.m06725 thioredoxin, putative similar to
SP|Q38879 Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis
thaliana}; contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 32.3 bits (70), Expect = 0.94
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 46 KNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALAS 83
K+ + G N L++ F +CG C+A P+ + +AS
Sbjct: 33 KSLFDSMKGSNKLLVIDFTAVWCGPCKAMEPRVREIAS 70
>At1g51630.1 68414.m05817 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown;
Length = 423
Score = 32.3 bits (70), Expect = 0.94
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 233 VKKIPSVVALENNLQATLLTPKQPTAQNILEEIDRFLKSKNYVFPPKYANMNDISDSSQQ 292
V+K+PS V+L + A + P + I E ID KSK + Y ++ SSQ
Sbjct: 160 VRKLPSHVSLRDI--AIVKVPTRVAEDYIKEHIDPIFKSKGNIRVTTYFPSVNLRKSSQG 217
Query: 293 RTFVPTSDVAYYNDLE 308
P S +A + LE
Sbjct: 218 AETDPVSCLAMFGSLE 233
>At1g50950.1 68414.m05728 thioredoxin-related contains weak hit to
Pfam PF00085: Thioredoxin; contains 2 predicted
transmembrane domains
Length = 484
Score = 32.3 bits (70), Expect = 0.94
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 43 LTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWK------KVIKLAV 96
LT FEK + L+V FY +C P + AS I R + + L
Sbjct: 147 LTGAAFEKFTH-HFQILVVNFYAPWCYWSNRLKPSW-VKASQITRERYNPGTDDRVLLGS 204
Query: 97 IDCFVEENSEICRQFEVMAYPSIRYF 122
+DC E +C+ + YPSIR F
Sbjct: 205 VDC--TEEPTLCKSNHIQGYPSIRIF 228
>At5g23490.1 68418.m02756 expressed protein
Length = 729
Score = 31.9 bits (69), Expect = 1.2
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 101 VEENSEICRQFEVMAYPSIRYFHENYMKSNSNVGEKMNIADTAERLKNQ------LIIKL 154
VEENS + + + A +Y + + SN+G+ N + T RL +Q ++IK
Sbjct: 52 VEENSRLKAELQRSALELAKYKSDESLPQTSNIGDHTN-STTVSRLVHQPVDWKPVVIKA 110
Query: 155 QAEQSMGRLIIAP 167
S G L++ P
Sbjct: 111 SDADSSGLLVVHP 123
>At1g07700.3 68414.m00829 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 217
Score = 31.9 bits (69), Expect = 1.2
Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 56 NNALLVQFYNSYCGHCRAFSPKYKALASDIARWKK---VIKLAVIDCFVEENSEICRQFE 112
N+ ++V FY + CG C+ + L + +K V+D + +E SE+ +
Sbjct: 120 NSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNVVDEY-DEQSEVAERLR 178
Query: 113 VMAYPSIRYFHENYMKSNSNVGEKMNI 139
+ A P ++ + + +K I
Sbjct: 179 IKAVPLFHFYKNGVLLESFATRDKERI 205
>At1g07700.1 68414.m00828 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 204
Score = 31.9 bits (69), Expect = 1.2
Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 56 NNALLVQFYNSYCGHCRAFSPKYKALASDIARWKK---VIKLAVIDCFVEENSEICRQFE 112
N+ ++V FY + CG C+ + L + +K V+D + +E SE+ +
Sbjct: 107 NSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNVVDEY-DEQSEVAERLR 165
Query: 113 VMAYPSIRYFHENYMKSNSNVGEKMNI 139
+ A P ++ + + +K I
Sbjct: 166 IKAVPLFHFYKNGVLLESFATRDKERI 192
>At3g24730.1 68416.m03105 mitosis DIM1 family protein contains Pfam
domain PF02966: Mitosis protein DIM1
Length = 151
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 74 FSPKYKALASDIARWKKVIKLAVIDCFVEENSEICRQFEVMAYPS-IRYFHENYMKSNSN 132
F ALA + K K+A++D E+ + F++ +PS I +F+ ++MK +S
Sbjct: 38 FGRSSDALAKSVRDVSKFAKVALVDVDSEDVQVYVKYFDITLFPSTIFFFNAHHMKLDSG 97
Query: 133 VGE 135
+
Sbjct: 98 TAD 100
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 40 VEILTNKNFEKKLYGQNNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDC 99
++ + F + +LV+F ++CG C+ P +AL+ + KL ++
Sbjct: 71 IKEIGESEFSSTVLESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGD-----KLTIVKI 125
Query: 100 FVEENSEICRQFEVMAYPSIRYFHE 124
+ N ++ +F+V P F +
Sbjct: 126 DHDANPKLIAEFKVYGLPHFILFKD 150
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 31.1 bits (67), Expect = 2.2
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 59 LLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVEENSEICRQFEVMAYPS 118
++V F++ CG C+A PK +A +K ++ + EE+ +C+ + P
Sbjct: 116 VVVDFFSPSCGGCKALHPKICKIA------EKNPEVEFLQVNYEEHRSLCQSLNIHVLPF 169
Query: 119 IRYF 122
R++
Sbjct: 170 FRFY 173
>At3g50380.1 68416.m05511 expressed protein
Length = 3071
Score = 29.9 bits (64), Expect = 5.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 10 EIFLIALVTGAVVPTTDDVDEQGLYRKSDQVEI 42
E+ +LVTG V P DE G+YR+S ++ +
Sbjct: 693 EVHSSSLVTGGVDPEMASYDEYGIYRRSIELSL 725
>At3g25830.1 68416.m03218 myrcene/ocimene synthase, putative similar
to myrcene/ocimene synthase [Arabidopsis thaliana]
GI:9957293; contains Pfam profiles PF03936: Terpene
synthase family, metal binding domain, PF01397: Terpene
synthase, N-terminal domain
Length = 600
Score = 29.9 bits (64), Expect = 5.0
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 14/120 (11%)
Query: 257 TAQNILEEIDRFLKSKNYVFPP-KYANMNDISDSSQQRTFVPTSDVAYYNDLEKTLKASL 315
T L E+ R +S NY P + + I + T V T DV L+K +K+ L
Sbjct: 37 TPDTTLVELSR--RSGNYQPSPWNHCYLLSIENKYASETEVITRDV-----LKKKVKSML 89
Query: 316 HTEITRHKTLTGEPLQALLDYLDVIKTSFPFRANLGEYIMDLHATLAARNSWTGGEVYDL 375
E K E L+ L+D L + S+ F + + + DLH + RN W + DL
Sbjct: 90 DDE----KKSRLEQLE-LIDDLQKLGVSYHFEIEINDTLTDLHLKM-GRNCWKCDKEEDL 143
>At3g25820.1 68416.m03215 myrcene/ocimene synthase, putative similar
to GI:9957293; contains Pfam profile: PF01397 terpene
synthase family
Length = 600
Score = 29.9 bits (64), Expect = 5.0
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 14/120 (11%)
Query: 257 TAQNILEEIDRFLKSKNYVFPP-KYANMNDISDSSQQRTFVPTSDVAYYNDLEKTLKASL 315
T L E+ R +S NY P + + I + T V T DV L+K +K+ L
Sbjct: 37 TPDTTLVELSR--RSGNYQPSPWNHCYLLSIENKYASETEVITRDV-----LKKKVKSML 89
Query: 316 HTEITRHKTLTGEPLQALLDYLDVIKTSFPFRANLGEYIMDLHATLAARNSWTGGEVYDL 375
E K E L+ L+D L + S+ F + + + DLH + RN W + DL
Sbjct: 90 DDE----KKSRLEQLE-LIDDLQKLGVSYHFEIEINDTLTDLHLKM-GRNCWKCDKEEDL 143
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 29 DEQGLYRKSDQVEILTNKNFEKKLYGQNNA---LLVQFYNSYCGHCRAFSPKYKALASDI 85
+ Q + + I + E K A L++ F ++CG CR SP Y LA+
Sbjct: 262 EAQAALNDGEVISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQH 321
Query: 86 AR 87
+R
Sbjct: 322 SR 323
>At2g39370.1 68415.m04832 expressed protein
Length = 328
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 424 KPGSEGPKVLKAMHGYVKNFFGCTECASHFQAMAARNRIFD 464
K S G K+ KA Y+++FFG T C+ ++ R+ D
Sbjct: 160 KQSSLGTKI-KASRAYLRSFFGKTSCSDESSCASSAARVAD 199
>At5g39930.1 68418.m04842 expressed protein ; expression supported
by MPSS
Length = 423
Score = 29.5 bits (63), Expect = 6.6
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 388 ITNLEYVGCKGSEPKYRGYTCGLWTLFHTLTVNAAQKPGSEGPKVL 433
IT EY+ C+ Y G L H +T + S+GP+V+
Sbjct: 72 ITGNEYISCETPMVNYLGLHNSLQVQRHRVTSSTRDSASSQGPRVI 117
>At1g69880.1 68414.m08042 thioredoxin, putative similar to
SP|Q38879 Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis
thaliana}; contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 29.5 bits (63), Expect = 6.6
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 56 NNALLVQFYNSYCGHCRAFSPKYKALAS 83
N L+++F +CG C+ PK + LA+
Sbjct: 59 NKLLVIEFTAKWCGPCKTLEPKLEELAA 86
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 29.5 bits (63), Expect = 6.6
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 59 LLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVEENSEICRQFEVMAYPS 118
+++ F S+C CR +P + +A KK + V+E + ++F+V A P+
Sbjct: 30 IVIDFTASWCPPCRFIAPVFAEMA------KKFTNVVFFKIDVDELQAVAQEFKVEAMPT 83
Query: 119 IRYFHE 124
+ E
Sbjct: 84 FVFMKE 89
>At5g61970.1 68418.m07778 signal recognition particle-related /
SRP-related low similarity to Signal recognition
particle 68 kDa protein (SRP68) from Homo sapiens
SP|Q9UHB9, Canis familiaris SP|Q00004
Length = 605
Score = 29.1 bits (62), Expect = 8.7
Identities = 21/75 (28%), Positives = 29/75 (38%)
Query: 103 ENSEICRQFEVMAYPSIRYFHENYMKSNSNVGEKMNIADTAERLKNQLIIKLQAEQSMGR 162
EN +CR+ PSIRY KSN E + I + + K++A R
Sbjct: 198 ENQVLCRERVEELEPSIRYCLHKIGKSNLQTSELLQIGEMEGPALDLFKAKIEAAMEEAR 257
Query: 163 LIIAPSFKIESYTSY 177
A S S+ Y
Sbjct: 258 SQQAASLTEFSWLGY 272
>At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1188
Score = 29.1 bits (62), Expect = 8.7
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 265 IDRFLKSKNYVFPPKYANMNDISDSSQQRTFVPTSDVAYYNDLEKTLKASLHTEITRHKT 324
+ RF K+++ PP+ ANM D S T D +Y+ ++EK + + + + HK+
Sbjct: 606 LKRFWKAQS---PPQPANMVKYLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVHKS 662
Query: 325 L 325
+
Sbjct: 663 I 663
>At3g06530.1 68416.m00757 BAP28-related similar to Protein BAP28
(Swiss-Prot:Q9H583) [Homo sapiens]
Length = 1830
Score = 29.1 bits (62), Expect = 8.7
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 45 NKNFEKKLYGQ-NNALLVQFYNSYCGHCRAFSPKYKALASDIARWKKVIKLAVIDCFVEE 103
N +F G LV Y RA PK+ A+++ K+ +KL ++ C ++
Sbjct: 371 NSDFRSSTSGSWAKKFLVVVSKKYPAELRAAVPKFLE-ATEVQSKKEDLKLEMLSCMLDG 429
Query: 104 NSEICRQF 111
NS++ F
Sbjct: 430 NSDMSHPF 437
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.133 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,239,550
Number of Sequences: 28952
Number of extensions: 528087
Number of successful extensions: 1294
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1226
Number of HSP's gapped (non-prelim): 75
length of query: 594
length of database: 12,070,560
effective HSP length: 85
effective length of query: 509
effective length of database: 9,609,640
effective search space: 4891306760
effective search space used: 4891306760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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