Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000479-TA|BGIBMGA000479-PA|undefined
(130 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 36 0.002
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 32 0.033
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 30 0.10
SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces po... 29 0.18
SPBC28E12.03 |rga4||GTPase activating protein Rga4|Schizosacchar... 29 0.31
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 29 0.31
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 28 0.41
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 28 0.41
SPAC2F7.17 |||peptide chain release factor|Schizosaccharomyces p... 27 1.2
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 26 2.2
SPAC4G8.11c |atp10||F1-F0 ATPase assembly protein|Schizosaccharo... 26 2.2
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 25 2.9
SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos... 25 2.9
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 25 3.8
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 25 3.8
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 25 3.8
SPAC26F1.13c |||leucine-tRNA ligase |Schizosaccharomyces pombe|c... 25 3.8
SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces ... 25 5.0
SPCC825.03c |psy1|sso1|SNARE Psy1|Schizosaccharomyces pombe|chr ... 25 5.0
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 25 5.0
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 24 6.6
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 24 6.6
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 24 6.6
SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase protein... 24 6.6
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 24 8.7
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 24 8.7
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 24 8.7
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 24 8.7
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 24 8.7
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 36.3 bits (80), Expect = 0.002
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 30 ELKQALTETSDLAQLARTQEARLDKMDNEVGRLKYEGQQMRSTVAELRTHVSKLVKEECV 89
ELK T+ S L Q++ E+RL ++ ++ + E + R +AEL +H+S + +
Sbjct: 910 ELKIESTKASHLKQVSYRLESRLFEISKQLDNSEQENNKFRERIAELESHLSNYAEAKLA 969
Query: 90 SE 91
E
Sbjct: 970 QE 971
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 31.9 bits (69), Expect = 0.033
Identities = 20/74 (27%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 20 LLRQLHIIRNELKQALTETSDLAQLARTQEARLDKMDNEVGRLKYEGQQMRSTVAELRTH 79
L R+L ++ +EL +A+ + Q++R ++++ ++ +L Q+ R+TV EL+
Sbjct: 519 LQRRLRMVEDELHEAINSKN-------VQQSRSEELEQQISKLTDNLQEYRNTVRELKLD 571
Query: 80 VSKLVKE-ECVSEL 92
+ K K+ E +S+L
Sbjct: 572 LEKSKKKNEDLSKL 585
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 30.3 bits (65), Expect = 0.10
Identities = 31/128 (24%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 2 KELKMEIREIGESVNNSALLRQLHI-IRNELKQALTETSDLAQLARTQEARLDKMDNEVG 60
++L +E +++ ++ LR+ + + +E + + L + T++A LDK+ +
Sbjct: 943 EKLSLEEKDLLDTKGELESLRENNATVLSEKAEFNEQCKSLQETIVTKDAELDKLTKYIS 1002
Query: 61 RLKYEGQQMRSTVAELRTHVSKLVKEECVSELLTRFGKKFDPPEIAALPGEKLVLEHFPN 120
K E Q+MR T + + + +E +SE L R KK + E + L + +L+
Sbjct: 1003 DYKTEIQEMRLT--NQKMNEKSIQQEGSLSESLKRV-KKLE-RENSTLISDVSILKQ--Q 1056
Query: 121 EEEIFVLR 128
+EE+ VL+
Sbjct: 1057 KEELSVLK 1064
Score = 24.6 bits (51), Expect = 5.0
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 2 KELKMEIREIGESVNNSALLRQLHIIRNELKQALTETSDLAQLARTQEARLDKMDNEVGR 61
+EL + R++ + N+ +LLRQ + +L A +E DL+ + + L K NE+
Sbjct: 1192 QELSKKHRDL--TFNHESLLRQSASYKEKLSLASSENKDLS----NKVSSLTKQVNELSP 1245
Query: 62 LKYEGQQMRSTVAELRTHVSKLVK 85
+ ++ + L S+L K
Sbjct: 1246 KASKVPELERKITNLMHEYSQLGK 1269
>SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 29.5 bits (63), Expect = 0.18
Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 6 MEIREIGESVNNSALLRQL-HIIRNELKQALTETSDLAQLARTQEARLDKM 55
+E+ G+ ++NSA + H + ++ QAL E S + + ++ + R+D +
Sbjct: 82 IEVNGFGDKIDNSASFEVVTHYLESQFDQALIEESKIKRNSKFTDTRVDAL 132
>SPBC28E12.03 |rga4||GTPase activating protein
Rga4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 933
Score = 28.7 bits (61), Expect = 0.31
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 16 NNSALLRQLHIIRNELKQALTETSDLAQLARTQEARLDKMDNEVGRLKYEGQQMRSTVAE 75
N S+L+R + + + A E+++ +LA R+ ++ EVG L E + S + E
Sbjct: 458 NRSSLVRASDVFTSNVFDATEESAN--ELA----IRISELQAEVGTLLLEATSLAS-IIE 510
Query: 76 LRTHVS-KLVKEECVSELLTR--FGKKFDPPEIAAL 108
+T VS + K+E V++L R + +K PE++ L
Sbjct: 511 QQTPVSPEAFKQELVADLNYRLDYLRKSFQPELSTL 546
>SPAC110.02 |pds5||cohesin-associated protein
Pds5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1205
Score = 28.7 bits (61), Expect = 0.31
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 24 LHIIRNELKQALTETSDLAQLARTQEARLDKMDNEVGRLKYE----------GQQMRSTV 73
LH + + KQA T + + T+E +LD + N V L+Y GQ T+
Sbjct: 716 LHGTQEQAKQAAT----IIAITETKEFKLDMITNIVENLEYNGGLPVRLMTLGQLFLYTL 771
Query: 74 AELRTHVSKLVKEECVSELLTRFGKKFD 101
E+ V+ V E V +++ RF +K+D
Sbjct: 772 EEVE-KVADQVTEFLVKKVIQRFPEKYD 798
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 28.3 bits (60), Expect = 0.41
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 7 EIREIGESVN--NSALLRQLHIIRNELKQALTETSDLAQLARTQEARLDKMDNEVGRLKY 64
E+ I ES++ N LL ++ IR EL E S Q T RL +N+V K
Sbjct: 658 EMTAIQESLSKRNQDLLSEMEAIRKEL-----ENSKYQQQLSTD--RLTNANNDVEAFKK 710
Query: 65 EGQQMRSTVAELRTHVSK 82
E +++RS L+ +S+
Sbjct: 711 EAKELRSINQNLQDIISR 728
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 28.3 bits (60), Expect = 0.41
Identities = 14/64 (21%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 30 ELKQALTET-SDLAQLARTQEARLDKMDNEVGRLKYEGQQMRSTVAELRTHVSKLVKEEC 88
EL ++L + SDL L +++ L+K+ ++G+++ E + + + T ++++V
Sbjct: 317 ELYKSLEKKRSDLESLLKSRRELLEKLTGDLGKIQGEIESLEKLKVKKSTMINEIVHRYN 376
Query: 89 VSEL 92
++E+
Sbjct: 377 INEI 380
>SPAC2F7.17 |||peptide chain release factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 396
Score = 26.6 bits (56), Expect = 1.2
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 23 QLHIIRNELKQALTETSDLAQLARTQEARLDKMDNEVGRLKYEGQQMRSTVAELRTHVS- 81
Q H + N+ + A+T +DLA+ + ARL ++ N + K +Q+ S + ++ S
Sbjct: 50 QFHQVNNKDQSAMTNDTDLAK----RIARLRRVHNAYSKFKSLSEQI-SDLKQMEAQESD 104
Query: 82 ---KLVKEECVSELLTRFGKKFDPPEIAALP 109
K++ ++E+ + K + E LP
Sbjct: 105 AEVKMMAVTEINEISNKIPKSIEDLENTLLP 135
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 25.8 bits (54), Expect = 2.2
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 1 MKELKMEIREIGESVNNSALLRQLHIIRNELKQALTET-----SDLAQLARTQEARLDKM 55
+ + + E +E+ + N L +QL + K+AL + +DL+Q T+ +LDK
Sbjct: 29 LSKQREECKELQSKITN--LRKQLKEGNKKQKRALQQKISQMEADLSQKHATERQKLDKG 86
Query: 56 DNEVGRLKYE 65
D E + E
Sbjct: 87 DEETNETQQE 96
>SPAC4G8.11c |atp10||F1-F0 ATPase assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 25.8 bits (54), Expect = 2.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 80 VSKLVKEECVSELLTRFGKKFDPPEI 105
V + + E+C +E +T + KF PEI
Sbjct: 194 VKRSIPEKCWNEYITAYDNKFSFPEI 219
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 25.4 bits (53), Expect = 2.9
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 16 NNSALLRQLHIIRNELKQALTETSDLAQLARTQEARLD---KMDNEVGRLKYEGQQMRST 72
N + L+ QLH++R + L D+ +L+R++ L K D E G + +
Sbjct: 870 NYANLVSQLHVVRAQCNALLNTFLDVGRLSRSKIPSLAVVVKGDPEAGPIAFGIADAEKL 929
Query: 73 VAELRTHVSKLV 84
V ++ KL+
Sbjct: 930 VGPTYENLCKLL 941
>SPCC338.07c |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 729
Score = 25.4 bits (53), Expect = 2.9
Identities = 12/25 (48%), Positives = 20/25 (80%), Gaps = 2/25 (8%)
Query: 16 NNSALLRQLHIIRNELKQ--ALTET 38
NNS+LLR L +++++L+Q AL +T
Sbjct: 110 NNSSLLRDLALLQSQLRQYKALADT 134
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.0 bits (52), Expect = 3.8
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 10 EIGESVNNSALLRQLHIIRNELKQALTETSDLAQLARTQEARLDKMDNEVGRLKYEGQQM 69
EI + + R + R L + L E+ AQ + +L+KM + +L+ E +
Sbjct: 454 EIRQQMTREMEERVSEVERTFLTKLLEES---AQGIEYTDQKLEKMGGWMKKLQDENSEK 510
Query: 70 RSTVAELRTHVSKLVKE 86
T+A+L + +L +E
Sbjct: 511 TETIAQLEQIIEELHEE 527
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 25.0 bits (52), Expect = 3.8
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 18 SALLRQLHIIRNELKQALTETSDLAQLARTQEARLDKMDNEVGRLKYEGQQMRSTVAELR 77
S L RQL +++EL + E + + A + M NE L+ + +++ + +
Sbjct: 666 SVLQRQLTDVKDELDVSEEEREEAIVAGQKLSASFELMSNEKQALELKYSSLKNELINAQ 725
Query: 78 THVSKLVKEECVSEL 92
+ + +EE +SEL
Sbjct: 726 NLLDR--REEELSEL 738
>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 25.0 bits (52), Expect = 3.8
Identities = 15/76 (19%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 5 KMEIREIGESVNNSALLRQLHIIRNELKQALTETSDLAQLARTQEARLDKMDNEVGRLKY 64
++E++ +S + L + L I RN+ DL +++ Q++ + NE+ + K
Sbjct: 617 ELEVKNYSKSTD--LLKKTLRIPRNDEPLEAANQFDLLKVSPQQKSEVPPKRNELSQSKL 674
Query: 65 EGQQMRSTVAELRTHV 80
+ ++ + + HV
Sbjct: 675 KNRKKKENSETNKNHV 690
>SPAC26F1.13c |||leucine-tRNA ligase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1111
Score = 25.0 bits (52), Expect = 3.8
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 47 TQEARLDKMDNEVGRLKYEGQQMRSTVAELRTHVSKLVKEECVSEL 92
T E +++++ + +LK E R T+ EL + +EE E+
Sbjct: 3 TTEPSVEQLETKTAKLKLENTTKRDTLIELEKKYQQKWQEEKAFEV 48
>SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1150
Score = 24.6 bits (51), Expect = 5.0
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 79 HVSKLVKEECVSELLTRF--GKKFDPPEIAALPGEKLVLEHFPNEE 122
H+ L+ C L+ G P EI L G+K++ F NEE
Sbjct: 921 HIMPLLDHACQQISLSNITQGTVVLPEEIRKLNGKKILNSFFDNEE 966
>SPCC825.03c |psy1|sso1|SNARE Psy1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 284
Score = 24.6 bits (51), Expect = 5.0
Identities = 12/65 (18%), Positives = 32/65 (49%)
Query: 21 LRQLHIIRNELKQALTETSDLAQLARTQEARLDKMDNEVGRLKYEGQQMRSTVAELRTHV 80
LR++ ++K+ ++LAQL + + + + V ++ + +R+ + E H+
Sbjct: 181 LREVQERHADIKRIERTIAELAQLFQDMATMVQEQEPMVDKIVTDAVNVRTNMGEGTQHM 240
Query: 81 SKLVK 85
+ +K
Sbjct: 241 DRAIK 245
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 24.6 bits (51), Expect = 5.0
Identities = 15/64 (23%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 36 TETSDLAQLARTQEARLDKMDNEVGRLKYEGQQMRSTVAELR-THVSKLVKEECVSELLT 94
+E DL++ T +LDK + + ++K + +++++AE + ++ S ++E + +LL
Sbjct: 201 SEAYDLSRQLLTVTEKLDKKEKDYEKIKEDVSSIKASLAEEQASNKSLRGEQERLEKLLV 260
Query: 95 RFGK 98
K
Sbjct: 261 SSNK 264
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 24.2 bits (50), Expect = 6.6
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 13 ESVNNSALLRQLHIIRNELKQALTETSDLAQLARTQEARLDKMDNE 58
E +N L + I++ EL L + +DL + ++ LDK+ N+
Sbjct: 528 EKINQ--LTSEKQILQVELDMLLNKENDLINDVESSQSSLDKLRND 571
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 24.2 bits (50), Expect = 6.6
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 52 LDKMDNEVGRLKYEGQQMRSTVAELRTHVSKLVKEECVSELLTRFGKKFDPPEIAALPGE 111
L+ D+ + ++ + MR T EL S + C S++L F KF ++++L E
Sbjct: 3773 LNLFDSLLSSIETATKNMR-TFKELAETSSFIEMSSCFSKVLRAFNLKFQSMKLSSLK-E 3830
Query: 112 KL 113
KL
Sbjct: 3831 KL 3832
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 24.2 bits (50), Expect = 6.6
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Query: 26 IIRNELKQALTETSDLAQLARTQEARLDKMDN--------EVGRLKYEGQQMRSTVAELR 77
+++NEL L + L +A L+K+ N V L+Y M V
Sbjct: 1073 VLKNELDNILPLSEVFPSLFHAIQATLEKVSNVNGKLNSENVAALRYADDTMSFLVTLQT 1132
Query: 78 THVSKLVKEECVSELLTR 95
T+ +L SELLT+
Sbjct: 1133 TYSFELTLNYDFSELLTK 1150
>SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 758
Score = 24.2 bits (50), Expect = 6.6
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 16 NNSALLRQLHIIRNELKQALTETSDLAQLARTQEARLDKMDNEVGRLKY--EGQQMRSTV 73
N + LLR +HII+N L + L D + R DK ++ Y +M
Sbjct: 46 NRNQLLRSIHIIQNLLNE-LDNYVDRSDCLFHSVWRTDKEKSKFSGNYYPFSPSKMNVIT 104
Query: 74 AELRTHVSKLVKEECVSEL 92
+L S E+ +S+L
Sbjct: 105 IDLSLRSSSTADEKLISQL 123
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 23.8 bits (49), Expect = 8.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 33 QALTETSDLAQLARTQEARLDKMDNEVGRLKYEGQQMRSTVAELRTHVSKLVKEE 87
Q + DL + R L+K +NE RL+ + + ++ A LR ++EE
Sbjct: 90 QRKSMVDDLRERERQFYDSLEKKENERDRLQEKLRALQEESANLRRQRENRLREE 144
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 23.8 bits (49), Expect = 8.7
Identities = 13/69 (18%), Positives = 31/69 (44%)
Query: 13 ESVNNSALLRQLHIIRNELKQALTETSDLAQLARTQEARLDKMDNEVGRLKYEGQQMRST 72
E NN +++R + N +KQ + ++ + T ++ MD E R + ++ +
Sbjct: 231 EPYNNISMIRGSKKVDNHIKQVILLDREIREDPTTTREDIEAMDIEKERKRENYEEYKQV 290
Query: 73 VAELRTHVS 81
+ H++
Sbjct: 291 DRIVAKHLN 299
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 23.8 bits (49), Expect = 8.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 46 RTQEARLDKMDNEVGRLKYEGQQMRSTVAELRTHVSKL 83
R A+L+K + + KY +RS + E VS L
Sbjct: 891 RITNAKLEKREKLINASKYIEDTLRSEIQEAAEKVSNL 928
>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 762
Score = 23.8 bits (49), Expect = 8.7
Identities = 13/63 (20%), Positives = 28/63 (44%)
Query: 33 QALTETSDLAQLARTQEARLDKMDNEVGRLKYEGQQMRSTVAELRTHVSKLVKEECVSEL 92
Q S L ++ ++ ++ +N+VG + + TV E+ + KE C+ +
Sbjct: 106 QDFERKSALFSISTSEVIIVNMWENQVGLYQGSNMALLKTVLEVNLQLFHNKKERCLLQF 165
Query: 93 LTR 95
+ R
Sbjct: 166 VIR 168
>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 23.8 bits (49), Expect = 8.7
Identities = 11/57 (19%), Positives = 32/57 (56%)
Query: 3 ELKMEIREIGESVNNSALLRQLHIIRNELKQALTETSDLAQLARTQEARLDKMDNEV 59
E+K E++++ +S++ + + +N +K + L ++++R+D++ NE+
Sbjct: 169 EIKEELKKLQDSLSIKLSMPADDLSKNGIKHLIIYKEKLRFSLESRKSRVDEIVNEM 225
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.132 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,207
Number of Sequences: 5004
Number of extensions: 18123
Number of successful extensions: 105
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 83
Number of HSP's gapped (non-prelim): 32
length of query: 130
length of database: 2,362,478
effective HSP length: 66
effective length of query: 64
effective length of database: 2,032,214
effective search space: 130061696
effective search space used: 130061696
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 49 (23.8 bits)
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