GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000479-TA|BGIBMGA000479-PA|undefined
         (130 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    27   0.27 
AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    25   0.84 
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   0.84 
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    24   1.9  
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    23   2.6  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   3.4  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 9   REIGESVNNSALLRQLHIIRNELKQALTETSDLAQLARTQEARLDKMDNEVGRLKYEGQQ 68
           R  GE    S  LR L+++      AL            +E   DK+ N+ G+++   ++
Sbjct: 587 RYTGEKSTRSDALRTLNLLNRSTDHALLAQKRQEHQRLVREC--DKIRNQRGQIENSIKE 644

Query: 69  MRSTVAELR 77
           ++   AELR
Sbjct: 645 LQERCAELR 653


>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 25.0 bits (52), Expect = 0.84
 Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 35  LTETSDLAQLARTQEARLDKMDNEVGRLKYEGQQMRSTVAELRTHVSKLVKEE 87
           LT T  + +  R  +  ++++  E+GRLK EG Q    ++     + +++  E
Sbjct: 200 LTNTMGMTERLRFLD-EVEQLRMEIGRLKEEGVQHIVVLSHCGLEIDRIIARE 251


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 25.0 bits (52), Expect = 0.84
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 49  EARLDKMDNEVGRLKYEGQQMRSTVAEL 76
           EARL+K +NE+  L      ++S   EL
Sbjct: 100 EARLEKTENEILELSQNAVNLKSNYLEL 127


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 35  LTETSDLAQLARTQEARLDKMDNEVGRLKYEGQQMRSTVAELRTHVSKLVKEE 87
           LT T  + +  R     ++++  E+GRLK EG Q    ++     + +++  E
Sbjct: 200 LTNTMGMTERLRFL-GEVEQLRMEIGRLKEEGIQHIVVLSHCGLEIDRIIARE 251


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 5/55 (9%)

Query: 77  RTHVSKLVKEECVSELLTRFGKKFDP-----PEIAALPGEKLVLEHFPNEEEIFV 126
           +T  S+L ++EC+ + +  F +  D      P++A+    K+V E +  +  +FV
Sbjct: 207 KTMTSELYQKECLQKRILPFIRSHDHPVMFWPDLASCHYSKVVREWYAEKGVLFV 261


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 44  LARTQEARLDKMDNEVGRLKYEGQQMRSTVAELR 77
           LA+T  A L ++  +   L  + +QM+  + ELR
Sbjct: 578 LAKTLPANLGQVTYKTSLLHLQPRQMKLVITELR 611


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.132    0.352 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,029
Number of Sequences: 2123
Number of extensions: 3767
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 6
length of query: 130
length of database: 516,269
effective HSP length: 57
effective length of query: 73
effective length of database: 395,258
effective search space: 28853834
effective search space used: 28853834
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)