Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000478-TA|BGIBMGA000478-PA|IPR011047|Quinonprotein
alcohol dehydrogenase-like, IPR008940|Protein prenyltransferase
(619 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0434 - 3302926-3303072,3303402-3303545,3303644-3304293,330... 36 0.072
06_03_0191 - 17720512-17721435,17721718-17721843,17721940-177221... 33 0.67
02_05_0680 - 30824652-30826010 33 0.67
01_06_0286 + 28191238-28191552 33 0.89
12_02_1216 + 27077570-27078313 32 1.2
12_02_0148 + 14404892-14405343,14405598-14405697,14406252-144063... 31 2.7
01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592 31 2.7
05_05_0284 + 23851033-23851279,23851514-23851827 31 3.6
09_04_0715 + 19697134-19697211,19697212-19697300,19697416-196974... 30 4.8
04_01_0192 - 2245794-2246186,2246699-2247490 30 4.8
03_01_0617 + 4532651-4532893,4534713-4534939,4535077-4535150,453... 30 4.8
01_05_0444 + 22298490-22298598,22299847-22300108,22302420-223025... 30 4.8
12_02_0303 + 17106482-17107261 30 6.3
07_01_0957 + 8037825-8038199,8038775-8038948 30 6.3
08_02_0880 + 22203440-22204324,22204763-22204876,22204964-222054... 29 8.3
07_03_0542 - 19256688-19256804,19257181-19257255,19257337-192574... 29 8.3
06_03_0347 + 19783824-19784348 29 8.3
04_04_1224 + 31858110-31858338,31859180-31859301,31859398-318595... 29 8.3
04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865... 29 8.3
03_05_0594 + 25981587-25981826,25981912-25982160,25982257-259838... 29 8.3
>07_01_0434 -
3302926-3303072,3303402-3303545,3303644-3304293,
3304410-3304493,3304651-3304703,3305127-3305197,
3305285-3305362,3305775-3305903,3305988-3306044,
3306693-3306923,3307748-3307882,3308609-3308684,
3308768-3309024,3309095-3309202,3309328-3309526,
3309600-3309604
Length = 807
Score = 36.3 bits (80), Expect = 0.072
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Query: 203 AARAFHSADRDDRALNL---YVDLRMFNKAQEYVGEGDGLAALTRRRAEWARHVNEPRAA 259
A A ADR A L +D M AQE + + A L R + + + N + A
Sbjct: 213 AINAEAEADRGAAAARLGGGMMDPEMMRLAQEQMSKMSP-ADLARMQQQLLSNPNLVKLA 271
Query: 260 AEMY--LAAGDVKRAAQLMAETGRRDMLIELARKLDKGSSESLRYV-AEALEQAGELATS 316
+E + A D +RAAQ M +T R D ++++A KL + E + + +A +Q + +
Sbjct: 272 SESMKNMRADDFRRAAQQMNQT-RPDEMLDMAEKLANANPEEVAAMKVQAEQQMSYVISG 330
Query: 317 ADVYQRLG-DYTKVAQLAVAAGEWSRA 342
A + ++ G + + Q + AA ++ A
Sbjct: 331 AKMLKQQGNELHRCEQYSEAAAKYKLA 357
>06_03_0191 - 17720512-17721435,17721718-17721843,17721940-17722140,
17722189-17722332,17722415-17722722,17723433-17723568,
17723748-17723841,17723976-17724073,17724951-17725004,
17725704-17726150,17726227-17726393,17726540-17726663,
17726751-17726837,17727000-17727056,17727492-17727560,
17727664-17727811,17727893-17728116,17728842-17728958,
17729649-17729742,17730573-17730640,17733278-17733334,
17733412-17733511,17733638-17733674,17734077-17734200,
17735254-17735322,17735371-17735410,17735905-17735993,
17736849-17736953,17737033-17737104,17737814-17737936,
17738049-17738117,17738966-17739059,17739145-17739231,
17740184-17740351,17740436-17740552,17741484-17741590,
17741671-17741803,17742564-17742667,17743504-17743629,
17744148-17744216,17744996-17745064,17745278-17745358,
17745444-17745533,17745896-17746000,17747803-17747873,
17748320-17748461,17749266-17749330,17750081-17750168,
17750236-17750325,17750437-17750673,17751064-17751170,
17751625-17751832,17752376-17752546
Length = 2366
Score = 33.1 bits (72), Expect = 0.67
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 394 VGNAVTEERFSDAGYLHHLLASQFLDTASSLSGKERQKSLNQYEYNERHARIYHAYDSVH 453
V + TE S YL S F DTA + K ++ S +E + +H +++ S H
Sbjct: 2170 VSDGTTEGLSSFDKYLKEPSTSHFSDTAQQVESKSQEFSCKDHEESPKHPKVHCTGSSAH 2229
Query: 454 KCVHEPFSLSQ 464
E SQ
Sbjct: 2230 VTKEETDDESQ 2240
>02_05_0680 - 30824652-30826010
Length = 452
Score = 33.1 bits (72), Expect = 0.67
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 263 YLAAGDVKRAAQLMAETGRRDMLIELARKLDKGSSESLRYVAEAL 307
YL D++ AA + + G ++L+EL DKG++E V + +
Sbjct: 297 YLVKNDIEHAASRLVDLGTVELLVELLADADKGTTEKALAVLDTV 341
>01_06_0286 + 28191238-28191552
Length = 104
Score = 32.7 bits (71), Expect = 0.89
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 281 RRDMLIELARKLDKGSSE-SLRYVAEALEQAGELATSADVYQRLGDYTKVAQLAVAAGEW 339
RR ML+E G E SL A+E+AG A + RLG + + +LA+ +GEW
Sbjct: 26 RRKMLMEREELGCGGGVERSLEATPSAVEKAGFDGAVACAFLRLGKWWR--RLALGSGEW 83
Query: 340 SRAFSLAREQSE 351
R +A E
Sbjct: 84 RRRLVVAAGSGE 95
>12_02_1216 + 27077570-27078313
Length = 247
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 235 EGDGLAALTRRRAEWARHVNEPRAAAEMYLAAGD--VKRAAQLMAE 278
E D +AL RRRA W + + + A LAA D ++RA + MAE
Sbjct: 74 EDDDPSALLRRRARWKQGLEAVKTAVAWRLAAKDDEIRRARREMAE 119
>12_02_0148 +
14404892-14405343,14405598-14405697,14406252-14406344,
14406422-14406607
Length = 276
Score = 31.1 bits (67), Expect = 2.7
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 544 EILRIDHEIDSNDPFLDKVEELFYLEDYEIQLVVKGHCPFCRHPAEHLKNEDDDAEDSM 602
E LR++ +N + ++E +ED I+ V + C F H H+K + D E ++
Sbjct: 201 EFLRVNGRYRTNAKDMPRLERRTSVEDTGIRNVQRDLCDFIHHECYHVKGDFIDPEGAL 259
>01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592
Length = 853
Score = 31.1 bits (67), Expect = 2.7
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 257 RAAAEMYLAAGDVKRAAQLMAE--TGRRDMLIELARKLDKGSSESLRYVAEALEQAGELA 314
RA E A ++++ +AE T RR++ ELAR +G + + EALE+ E A
Sbjct: 174 RAGKEAQEHAAELRKHRAALAELATARRELEAELARAARRGDAAEAE-LGEALERRDEAA 232
Query: 315 TSA 317
++A
Sbjct: 233 STA 235
>05_05_0284 + 23851033-23851279,23851514-23851827
Length = 186
Score = 30.7 bits (66), Expect = 3.6
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 240 AALTRRRAEWARHVNEPRAAAEMY--LAAGDVKRAAQLMAETGRRDMLIELARKLDKGSS 297
AA T R A A AAA LAA RAA+L A R ++ LD +
Sbjct: 13 AAATSRAARLAAVARHDAAAASRSAGLAAAAASRAARLAAAAASRAARLKPRPPLDDAAR 72
Query: 298 ESLRYVAEALEQAGELATSADV 319
S RY +E + G+ T D+
Sbjct: 73 LSFRYSSEPPDD-GKCVTKEDL 93
>09_04_0715 +
19697134-19697211,19697212-19697300,19697416-19697485,
19697756-19697816,19698223-19698461,19698578-19698704,
19698908-19699181,19699479-19699611,19700023-19700109,
19700231-19700365
Length = 430
Score = 30.3 bits (65), Expect = 4.8
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 485 PGVSMLYPLHIFWFSRLRHQVLPLVQFKPAEGITHEEAFDLIERTPLPEVKDEQNTSDAE 544
PG +L+ L FWF L HQV + + G+T E + IE ++ + +
Sbjct: 8 PGGHLLF-LISFWFVSLVHQVAVDTEHDDSIGVTDESGWPCIELD--RRMRRMNGRNPEK 64
Query: 545 ILRIDHEIDSN 555
++++HE DS+
Sbjct: 65 NIKMEHENDSS 75
>04_01_0192 - 2245794-2246186,2246699-2247490
Length = 394
Score = 30.3 bits (65), Expect = 4.8
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 63 DVSASRGCLSVVDEASTCRVYSLPSGELQYTGGRVFCLQANSMQTI 108
D+ A + + ++ R YSL SG L+Y GR++ +NS++TI
Sbjct: 103 DIQAHKMLSMIGTDSDPNRTYSLESGILRYK-GRIYVGDSNSIRTI 147
>03_01_0617 + 4532651-4532893,4534713-4534939,4535077-4535150,
4535753-4535809,4535940-4536280,4536979-4537047,
4537152-4537219,4537404-4539569,4540101-4540178,
4540326-4540437,4540722-4540772,4540886-4540936
Length = 1178
Score = 30.3 bits (65), Expect = 4.8
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 415 SQFLDTASSLS-GKERQKSLNQYEYNERHARIYHAYDSVHKCVHEPFSLSQPE 466
S+FL L+ KER K L Y ER +YH + HK + + FSL E
Sbjct: 1109 SEFLKVQEDLNVAKERDKDL-YYNIMERIRDMYHESGTRHKLMKKVFSLLHEE 1160
>01_05_0444 +
22298490-22298598,22299847-22300108,22302420-22302516,
22302633-22302647,22302775-22302831,22303481-22303557,
22303688-22303967
Length = 298
Score = 30.3 bits (65), Expect = 4.8
Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 404 SDAGYLHHLLASQFLDTASSLSGKERQKSLNQYEYNERHARIYHAYDSVHKCVHEPFSL 462
++A + ++ L T + K ++++ RHA++YH++DSV H + L
Sbjct: 227 NNANFASYMSTHAILSTKNDYVDKLNANMIDRFS---RHAKVYHSFDSVDDDPHNSYHL 282
>12_02_0303 + 17106482-17107261
Length = 259
Score = 29.9 bits (64), Expect = 6.3
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 246 RAEWARHVNEPRAAAEMYLAAGDVKRAAQLMAETGRRDMLIELARKLDKGSSESLRYVAE 305
R E ARHV RAAA + L+ R + + RR ++ AR L + + L
Sbjct: 95 RRERARHVARLRAAASLRLSVASAIRGLAVRSTATRR--CVKTARGLIRQTQRLLPVGER 152
Query: 306 ALEQAGELATSADV 319
L+ GE T+ V
Sbjct: 153 DLDGGGEATTTERV 166
>07_01_0957 + 8037825-8038199,8038775-8038948
Length = 182
Score = 29.9 bits (64), Expect = 6.3
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 6/127 (4%)
Query: 239 LAALTRRRAEWARHVNE-PRAAAEM-YLAAGDVKRAAQLMAETGRRDMLIELARKLDKGS 296
L AL R R + AR + P + EM Y AG + T +L + A + ++
Sbjct: 17 LVALRRLRTQAARRRRDVPGNSDEMAYDVAGASDALRAPSSGTPAGVLLEQPADEFEEDG 76
Query: 297 SESLRYVAEALEQAGELATSADVYQRLGDYTKVAQLAVAAGE----WSRAFSLAREQSEC 352
+ + + G D QRLGD T+ + VAAGE W + + S
Sbjct: 77 NVDESERTSVMSRRGGCDREGDNVQRLGDITRRRGIEVAAGEARTSWQQRSLFSMIPSVL 136
Query: 353 KRDVYLP 359
+R + P
Sbjct: 137 RRPISFP 143
>08_02_0880 +
22203440-22204324,22204763-22204876,22204964-22205455,
22205646-22205819,22206589-22206978,22209927-22210022,
22210645-22210760,22210872-22211042,22211126-22211285,
22211388-22211573,22211665-22211793,22211918-22211996,
22212159-22212268
Length = 1033
Score = 29.5 bits (63), Expect = 8.3
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 234 GEGDGLAALTRRRAEWARHVNEPRAAAEMYLAAGDVKRAAQLMA 277
G+G G RR +W R + RAAA +AA + R A ++A
Sbjct: 376 GQGQGQGQSEGRRNDWRRRWSPRRAAARAQVAAEENWRRAWVLA 419
>07_03_0542 -
19256688-19256804,19257181-19257255,19257337-19257426,
19257506-19257568,19257659-19257856,19257973-19258074,
19259276-19259424,19260136-19260205,19260460-19260582,
19261541-19261600
Length = 348
Score = 29.5 bits (63), Expect = 8.3
Identities = 30/136 (22%), Positives = 53/136 (38%), Gaps = 4/136 (2%)
Query: 345 LAREQSECKRDVYLPYAHKMAQ-ENKFIEAQKAYHMAGETATAMRVFTILVGNAVTEERF 403
+AR + + + K+ Q E+K IE + + + G+ A A +T +R
Sbjct: 172 IARRKQRVREAPLAEHTTKLQQSESKMIEHKASMAVLGKEAAAALAAVESQQQRITLQRL 231
Query: 404 S---DAGYLHHLLASQFLDTASSLSGKERQKSLNQYEYNERHARIYHAYDSVHKCVHEPF 460
+A L HL + LD + E+QK + H R A + + VH
Sbjct: 232 VGMVEAEKLFHLRLAAILDDVEAEMSSEKQKRESAPPTIHSHKRAEKAQYFLAEAVHNFN 291
Query: 461 SLSQPETLLNAARYIL 476
++ E L Y++
Sbjct: 292 GTTEKELSLIVGDYVV 307
>06_03_0347 + 19783824-19784348
Length = 174
Score = 29.5 bits (63), Expect = 8.3
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 559 LDKVEELFYLEDYEIQLVVKGHCPFCRHPAEHLKNEDDDAEDSMLNDSTASTPGSP 614
L + L+++E ++ L CP CR E EDDD + D ++ T P
Sbjct: 118 LPACKHLYHVECIDMWLASHATCPICRTEVEP-PPEDDDGRPAPAADESSPTEALP 172
>04_04_1224 +
31858110-31858338,31859180-31859301,31859398-31859507,
31859661-31859725,31859940-31860004,31860387-31860632,
31861212-31861313,31861484-31861534,31862015-31862105,
31862777-31862841
Length = 381
Score = 29.5 bits (63), Expect = 8.3
Identities = 9/31 (29%), Positives = 22/31 (70%)
Query: 6 IPKSWSMPAPIRYVKVTSLRFEEVLLLGLMN 36
+P+ WS+PAP++ + + +F+ ++ + L+N
Sbjct: 339 MPQGWSLPAPLKSHQASLQKFQGLMYIDLVN 369
>04_04_1035 + 30283456-30283536,30284823-30285359,30285508-30286512,
30286718-30287042,30287563-30287818,30287901-30288117,
30288743-30289095,30289330-30289833,30291267-30292467,
30292614-30292970,30293258-30293495,30294083-30295125,
30295234-30296649,30296731-30296855,30297036-30297314,
30297352-30297382,30298957-30299022,30299447-30299689,
30299848-30299898,30299980-30300071,30300182-30300249,
30300515-30300600,30300720-30300824,30300994-30301127,
30302403-30302436,30302620-30302892,30303019-30303288,
30303384-30303974,30304065-30304214
Length = 3376
Score = 29.5 bits (63), Expect = 8.3
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 271 RAAQLMAETGRRDMLIELARKLDKGSSESLRYVAEALEQAGELATSADVYQRLGDYTKVA 330
RAA L+A R ++ + G S SL+ +E E G+ +A Y +LGDY K
Sbjct: 1639 RAAGLLATADR-----VISTNFEMGQS-SLQKASEIFESIGKHEKAATCYMKLGDYKKAG 1692
Query: 331 QL 332
+
Sbjct: 1693 MV 1694
>03_05_0594 +
25981587-25981826,25981912-25982160,25982257-25983818,
25984139-25984390,25984471-25984581,25984669-25984729,
25984829-25984921,25984999-25985184
Length = 917
Score = 29.5 bits (63), Expect = 8.3
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 544 EILRIDHEIDSNDPFLDKVEELFYLEDYEIQLVVKGHCPFCRHPAEHLKNEDDDAEDSM 602
E LR++ +N L ++E +D I V + C F H H+K + D E ++
Sbjct: 842 EFLRVNERYRTNAEDLPRLERRTSFDDTGITNVQRDLCHFIHHECCHVKGDFFDPESAL 900
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.132 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,842,999
Number of Sequences: 37544
Number of extensions: 751284
Number of successful extensions: 2088
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2078
Number of HSP's gapped (non-prelim): 23
length of query: 619
length of database: 14,793,348
effective HSP length: 86
effective length of query: 533
effective length of database: 11,564,564
effective search space: 6163912612
effective search space used: 6163912612
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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