GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000478-TA|BGIBMGA000478-PA|IPR011047|Quinonprotein
alcohol dehydrogenase-like, IPR008940|Protein prenyltransferase
         (619 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.        29   0.28 
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    26   3.4  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     25   4.5  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   5.9  

>DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.
          Length = 447

 Score = 29.5 bits (63), Expect = 0.28
 Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 2/105 (1%)

Query: 359 PYAHKMAQENKFIEAQKAYHMAGETATAMRVFTILVGNAVTEERFSDAGYLHHLLASQFL 418
           P   K A++   +E  ++    GE+   +R+   +      E  F     L+++L   + 
Sbjct: 32  PGDEKKAEKATDLEQSRSRLYKGESIFTLRLLDAINTATPNENLFFSPYSLYNVLLMMYF 91

Query: 419 DTASSLSGKERQKSLNQYEYNERHARIYHAYDSVHKCVHEPFSLS 463
             A   + K  + SLN  ++ +    +Y AYD+  K +   FS S
Sbjct: 92  G-ARDTTEKLLRTSLN-LQWADSKTTVYEAYDTARKSLRGRFSES 134


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 25.8 bits (54), Expect = 3.4
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 409 LHHLLASQFLDTASSLSGKERQKSLNQYEYNERHARIYHAYDSVH 453
           LH +L    LDT++S   K+++K      YN  +   Y+  +  H
Sbjct: 130 LHDILFRHLLDTSASAPKKKKRKPKPPRIYNNNYYYNYYCRNISH 174


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 3/42 (7%)

Query: 560 DKVEELFYL---EDYEIQLVVKGHCPFCRHPAEHLKNEDDDA 598
           DK+ ++++L   +D  ++ VVK H   C+H   H     D A
Sbjct: 248 DKLSDMYWLRIAQDRVMKSVVKEHTKNCQHTWHHRLEHRDPA 289


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 427 KERQKSLNQYEYNERHARIYHAYDSVHKCVHEPFSLSQPETLLNAARYILALLDGEAPPG 486
           +++Q+  +Q+    +H   +HA    +   H P  +S       A+     LL   APP 
Sbjct: 640 QQQQQQQHQHHQAHQHQGQHHAQHHSNGTHHGPSLMSSARESCGASALSRKLLTESAPP- 698

Query: 487 VSMLYPLHIFWFSRLRHQ 504
           ++ + P    + SR R Q
Sbjct: 699 IAPMSPRPNRFPSRPRRQ 716


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.132    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,977
Number of Sequences: 2123
Number of extensions: 25994
Number of successful extensions: 48
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 46
Number of HSP's gapped (non-prelim): 4
length of query: 619
length of database: 516,269
effective HSP length: 68
effective length of query: 551
effective length of database: 371,905
effective search space: 204919655
effective search space used: 204919655
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)