Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000478-TA|BGIBMGA000478-PA|IPR011047|Quinonprotein
alcohol dehydrogenase-like, IPR008940|Protein prenyltransferase
(619 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g27595.1 68417.m03964 protein transport protein-related low s... 33 0.43
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 32 1.3
At3g28770.1 68416.m03591 expressed protein 31 1.7
At3g04610.1 68416.m00493 KH domain-containing protein similar pu... 31 1.7
At2g31310.1 68415.m03823 LOB domain protein 14 / lateral organ b... 31 2.3
At1g62590.1 68414.m07061 pentatricopeptide (PPR) repeat-containi... 31 2.3
At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR... 30 4.0
At3g21000.1 68416.m02655 expressed protein ; expression supporte... 30 4.0
At4g20410.1 68417.m02979 gamma-soluble NSF attachment protein / ... 30 5.2
At5g28920.1 68418.m03569 expressed protein 29 6.9
At5g27270.1 68418.m03254 pentatricopeptide (PPR) repeat-containi... 29 6.9
At2g17840.1 68415.m02066 senescence/dehydration-associated prote... 29 6.9
At2g04515.1 68415.m00457 expressed protein 29 6.9
At1g08420.1 68414.m00931 kelch repeat-containing protein / serin... 29 6.9
At3g28300.1 68416.m03535 integrin-related protein 14a identical ... 29 9.1
At3g28290.1 68416.m03533 integrin-related protein 14a identical ... 29 9.1
At2g35030.1 68415.m04297 pentatricopeptide (PPR) repeat-containi... 29 9.1
At2g32450.1 68415.m03964 calcium-binding EF hand family protein ... 29 9.1
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 33.5 bits (73), Expect = 0.43
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 226 FNKAQEYVGEGDGLAALTRRRAEWARHVNEP--RAAAEMYLAAGDVKRAAQLMAETGRRD 283
F K+Q +G+G GL L ++ E R NE R + A D+K + +L E +
Sbjct: 75 FQKSQSRLGKGTGL--LVQQTQEDLRKANEQIERLKKDKAKALDDLKESEKLTKEANEKL 132
Query: 284 MLIELARKLDKGSSESLRYVAEALEQAG 311
A+ + SSE ++ A LEQAG
Sbjct: 133 REALAAQHHAEKSSEIEKFRAVELEQAG 160
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 31.9 bits (69), Expect = 1.3
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 555 NDPFLDKVEELFYLEDYEIQLVVKGHCPFCRHPAEHLKNEDDDAEDSMLNDSTAS 609
+DPF + L + +L VK +C P E L ++DDD DSM D + S
Sbjct: 117 SDPFNGEAASLLMRDRAAYELKVKEYCEKYAKPEEILSDDDDD--DSMSEDGSDS 169
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 31.5 bits (68), Expect = 1.7
Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 6/142 (4%)
Query: 279 TGRRDMLIELARKLDKGSSESLR-YVAEALEQAGELATSADVYQRLGDYTKVAQLAVAAG 337
TG D +I + +S+ + +++ E++ +Q+L DY K L +
Sbjct: 1866 TGTGDDIISTTTDTESNTSKEVTSFISNLEEKSPGTQEFQSFFQKLKDYMKY--LCPVSS 1923
Query: 338 EWSRAFSLAREQSECKRDVYLPYAHKMAQENKFIEAQKAYHMAGETATAMRVFTIL---V 394
+ S + L A + Q K Q + G M+ TIL +
Sbjct: 1924 TFEAKDSRSYMSEMISMATKLSDAMAVLQAKKSGSGQMKTTLQGYQQEVMKTLTILQSVM 1983
Query: 395 GNAVTEERFSDAGYLHHLLASQ 416
G AVTE++ D+G L L+ Q
Sbjct: 1984 GKAVTEQQSKDSGSLTLTLSQQ 2005
>At3g04610.1 68416.m00493 KH domain-containing protein similar
putative nucleic acid binding protein GB:CAB39665
[Arabidopsis thaliana]; Pfam HMM hit: KH domain family
of RNA binding proteins
Length = 577
Score = 31.5 bits (68), Expect = 1.7
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 35 MNGEIWQVEPNSGVSMMILQTPASVRCLDVSASRGCLSVVDEASTCRVYSLPSGELQYTG 94
++GE Q P S VS +L PAS + G + + EAS C V L S +L
Sbjct: 264 LDGEASQAPPPSKVSTRLL-VPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLP--- 319
Query: 95 GRVFCLQANS-MQTINVPLSHAVHQYIE 121
VF LQ + ++ + P S VH+ +E
Sbjct: 320 --VFALQDDRVVEVVGEPTS--VHRALE 343
>At2g31310.1 68415.m03823 LOB domain protein 14 / lateral organ
boundaries domain protein 14 (LBD14) identical to
SP|Q9SJW5| LOB domain protein 14 {Arabidopsis thaliana}
Length = 188
Score = 31.1 bits (67), Expect = 2.3
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 400 EERFSDAGYLHHLL-ASQFLDTASSLSGKERQKSLNQYEYNERHARIYHAYDSVHKCVHE 458
EE S+ +H + AS F S L +R ++ Y E H+R++ D ++ CV +
Sbjct: 31 EEGSSNFAAIHKVFGASNFSKLISHLPDHDRCDAVRTISY-EAHSRLH---DPIYGCVSQ 86
Query: 459 PFSLSQPETLLNAARYIL 476
FSL Q L A +L
Sbjct: 87 IFSLQQQVVSLQAQVVLL 104
>At1g62590.1 68414.m07061 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 634
Score = 31.1 bits (67), Expect = 2.3
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 7/122 (5%)
Query: 301 RYVAEALEQAGELATSADVYQRLGDYTKVAQLAVAAGEWSRAFSLAREQSECKRDVYLPY 360
R+V +AL E+ T + + Y+ + + G WS A L + E K + L
Sbjct: 274 RHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 332
Query: 361 AHKM----AQENKFIEAQKAYHMAGETATAMRVFTI--LVGNAVTEERFSDAGYLHHLLA 414
+ + +E KF+EA+K Y + + +FT LV +R A + +
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 415 SQ 416
S+
Sbjct: 393 SK 394
>At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1095
Score = 30.3 bits (65), Expect = 4.0
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 307 LEQAGELATSADVYQRLGDYTKVAQLAVAAGEWSRAFSLAREQSECKRDVYLPYA-HKMA 365
L+ E++T+ + +G T + ++ + WS+ + E+++ KR V++PY K+
Sbjct: 714 LQTFPEISTNIRLLNLIG--TAITEVPPSVKYWSKIDEICMERAKVKRLVHVPYVLEKLC 771
Query: 366 -QENKFIEAQKAY 377
+ENK +E Y
Sbjct: 772 LRENKELETIPRY 784
>At3g21000.1 68416.m02655 expressed protein ; expression supported
by MPSS
Length = 405
Score = 30.3 bits (65), Expect = 4.0
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 142 ERLGVAALEEMSFEVARKAFQRSENITFLSLIDNLQERFDAGEKRDVIHGEILAYRGRYT 201
ERLG A LE+ +E+ + F +F L L+E D + E YR
Sbjct: 149 ERLGRAKLEKSDYEICKNVFTTLSG-SFDGLDSMLEELIDVHKMTSKSLVEYFYYR---- 203
Query: 202 DAARAFHSADRDDRALNLYVDLRMFNKAQEYVG 234
H + ++ L DLR+ +K++++ G
Sbjct: 204 -----VHESSTEEAIFGLLKDLRLKSKSEKWCG 231
>At4g20410.1 68417.m02979 gamma-soluble NSF attachment protein /
gamma-SNAP identical to gamma-soluble NSF attachment
protein; gamma-SNAP [Arabidopsis thaliana] GI:6013206
Length = 291
Score = 29.9 bits (64), Expect = 5.2
Identities = 44/184 (23%), Positives = 74/184 (40%), Gaps = 20/184 (10%)
Query: 200 YTDAARAFHSADRDDRALNLYVDLRMFNKAQEYVGEG-------DGLAALTRRRAEWARH 252
Y AA F ++++ ++A V L +K QE + AAL ++ + W
Sbjct: 34 YEQAANGFRASNKYEKAK---VALEKASKGQEMQASPWDAAKHMESAAALAQKLSIWNEV 90
Query: 253 VNEPRAAAEMYLAAGDVKRAAQLMAETGR--RDMLIELARKLDKGSSESLRYVAEALEQA 310
+ R A+E+Y+ G + A+ + + R D+ + A +L + E L
Sbjct: 91 ADFYRKASELYVECGRAQPASDALGKAARALEDVKPDDAIQLYTDACEILEEDGRDQMAF 150
Query: 311 GELATSADVYQRLGDYTKVAQLAVAAGEWSRAFSLAREQSECKR-----DVYLPYAHKMA 365
A+VY +L +T A + G A S+CK +YL YAH +
Sbjct: 151 DLYRACANVYIKLEKFTDAATFFLRLG--VAADKCDATNSQCKAYLSAIILYL-YAHDLQ 207
Query: 366 QENK 369
Q K
Sbjct: 208 QAEK 211
>At5g28920.1 68418.m03569 expressed protein
Length = 419
Score = 29.5 bits (63), Expect = 6.9
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 525 LIERTPLPEVKDEQNTSDAEILRIDHEIDSNDPFLDKVEELFYL 568
L TP DE +SD EI R DHE+ + + EL +
Sbjct: 272 LAPATPATPNDDESASSDDEIERFDHEVGLGEILANNASELLIM 315
>At5g27270.1 68418.m03254 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1038
Score = 29.5 bits (63), Expect = 6.9
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 305 EALEQAGELATSADVYQRLGDYTKVAQLAVAAGEWSRAFSL 345
EAL+ GE+ + V + + Y+ V L+V AG+W +A L
Sbjct: 311 EALKAFGEMKSLGFVPEEV-TYSSVISLSVKAGDWEKAIGL 350
>At2g17840.1 68415.m02066 senescence/dehydration-associated
protein-related (ERD7) similar to senescence-associated
protein 12 [Hemerocallis hybrid cultivar]
gi|3551958|gb|AAC34857; strong similarity to
early-responsive to dehydration stress ERD7 protein
[Arabidopsis thaliana] gi|15320412|dbj|BAB63916;
identical to cDNA ERD7 partial cds GI:15320411
Length = 452
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 276 MAETGRRDMLIELARKLDKGSSESLRYVAEALEQAGE 312
+A G+ +L+EL + L+ SS S++ V+E ++AGE
Sbjct: 172 IASKGQEHLLVELEKILEDYSSFSVQEVSEEAKEAGE 208
>At2g04515.1 68415.m00457 expressed protein
Length = 196
Score = 29.5 bits (63), Expect = 6.9
Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 514 AEGITHEEAFDLIERTPLPEVKDEQNTSDAEILRIDHEIDSNDPFLDKVEELFYLEDYEI 573
++ ++H +A +++E+T +KD + T +++ + E + + +V L E+ E+
Sbjct: 77 SDSLSHGKAINIVEQTKEVGIKDLKETKVNKVVALLEESNVSKEEEGRV-VLSREEEEEV 135
Query: 574 QLVVKGHCPFCRHPAEHLKNEDDDAEDSMLNDSTAST 610
LVVK + +D D +D +NDS S+
Sbjct: 136 ALVVKEDEGILVQDLSITRLDDHD-DDDAINDSLLSS 171
>At1g08420.1 68414.m00931 kelch repeat-containing protein /
serine/threonine phosphoesterase family protein contains
Pfam profiles: PF00149 calcineurin-like phosphoesterase,
PF01344 kelch motif
Length = 1018
Score = 29.5 bits (63), Expect = 6.9
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 361 AHKMAQENKFIEAQKAYHMAGETATAMRVFTILVGNAVTEERFSDAGY-LHHLLASQFLD 419
A K Q N +E A T + F+++ +++ + AG LHH +
Sbjct: 555 AAKARQVNGEVELPDRDCGAEATPSGKPTFSLIKPDSMGSMSVTPAGIRLHHRAVVVAAE 614
Query: 420 TASSLSGKERQKSLNQYEYNER 441
T +L G RQ S++Q+E R
Sbjct: 615 TGGALGGMVRQLSIDQFENEGR 636
>At3g28300.1 68416.m03535 integrin-related protein 14a identical to
integrin-related At14a protein GI:11994573 [Arabidopsis
thaliana]
Length = 385
Score = 29.1 bits (62), Expect = 9.1
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 89 ELQYTGGRVFCLQANSMQTINVPL-SHAVH-QYIEHKL-FNEAYAVACLGVTSSDWERLG 145
ELQ + + +T VPL HA + ++ +H N+ + +G WE
Sbjct: 34 ELQQKTSNLINSFTSDAKTGLVPLPQHAAYKEFTKHLAEVNQQVSDYIIGYGEVVWENST 93
Query: 146 VAALEEMSFEVARKAFQRSENIT 168
+ +L E FE A+K +EN+T
Sbjct: 94 LRSLVETYFESAKKTLDIAENVT 116
>At3g28290.1 68416.m03533 integrin-related protein 14a identical to
At14a protein GI:11994573 [Arabidopsis thaliana] [Gene
230 (1), 33-40 (1999)], At14a protein [Arabidopsis
thaliana] GI:4589123
Length = 385
Score = 29.1 bits (62), Expect = 9.1
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 89 ELQYTGGRVFCLQANSMQTINVPL-SHAVH-QYIEHKL-FNEAYAVACLGVTSSDWERLG 145
ELQ + + +T VPL HA + ++ +H N+ + +G WE
Sbjct: 34 ELQQKTSNLINSFTSDAKTGLVPLPQHAAYKEFTKHLAEVNQQVSDYIIGYGEVVWENST 93
Query: 146 VAALEEMSFEVARKAFQRSENIT 168
+ +L E FE A+K +EN+T
Sbjct: 94 LRSLVETYFESAKKTLDIAENVT 116
>At2g35030.1 68415.m04297 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 627
Score = 29.1 bits (62), Expect = 9.1
Identities = 35/169 (20%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 277 AETGRRDMLIELARKLDKGSSESLRYVAEALEQAGELATSADVYQRLGDYTKVAQLAVAA 336
A++GR D +EL ++ + + S + +AL Q G + + ++++R+ V+ A+
Sbjct: 151 AQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVD 210
Query: 337 G-EWSRAFSLAREQSECKRDVYLPYAHKM----AQENKFIEAQKAYHMAGETATAMRVFT 391
G + AR +C + + + M AQ N+ EA + + + E A T
Sbjct: 211 GLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFA-SWNT 269
Query: 392 ILVGNAVTEERFSDAGYLHHLLASQFLDTASSLSG----KERQKSLNQY 436
++ G E G + + + ++G KE +++LN +
Sbjct: 270 MITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVF 318
>At2g32450.1 68415.m03964 calcium-binding EF hand family protein low
similarity to O-linked GlcNAc transferase [Homo sapiens]
GI:2266994; contains Pfam profiles PF00036: EF hand,
PF00515: TPR Domain
Length = 802
Score = 29.1 bits (62), Expect = 9.1
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 12/105 (11%)
Query: 196 YRGRYTDAARAFHSADRDDRALNLY---VDLR------MFNKAQEYVGEGDGLAA---LT 243
Y + D A + H+ D+RA+ ++ +DL+ ++N Y+ G A T
Sbjct: 372 YADAHCDLASSLHAMGEDERAIEVFQRAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYT 431
Query: 244 RRRAEWARHVNEPRAAAEMYLAAGDVKRAAQLMAETGRRDMLIEL 288
R A W H A L AG+ + A + + E + +EL
Sbjct: 432 RVLAVWPNHWRAQLNKAVSLLGAGETEEAKRALKEALKMTNRVEL 476
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.132 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,134,295
Number of Sequences: 28952
Number of extensions: 586539
Number of successful extensions: 1633
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1628
Number of HSP's gapped (non-prelim): 20
length of query: 619
length of database: 12,070,560
effective HSP length: 85
effective length of query: 534
effective length of database: 9,609,640
effective search space: 5131547760
effective search space used: 5131547760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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