Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000477-TA|BGIBMGA000477-PA|IPR001680|WD-40 repeat,
IPR011046|WD40-like
(363 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 54 1e-07
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 54 2e-07
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 54 2e-07
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 54 2e-07
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 54 2e-07
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 53 3e-07
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 52 5e-07
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 52 5e-07
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 52 8e-07
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 51 1e-06
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 50 2e-06
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 50 2e-06
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 50 3e-06
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 50 3e-06
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 50 3e-06
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 50 3e-06
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 48 7e-06
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 48 1e-05
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 48 1e-05
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 47 2e-05
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 47 2e-05
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 47 2e-05
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 47 2e-05
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 46 3e-05
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 46 3e-05
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 46 3e-05
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 46 4e-05
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 46 5e-05
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 45 7e-05
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 45 9e-05
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 44 1e-04
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 44 1e-04
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 44 2e-04
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 44 2e-04
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 44 2e-04
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 44 2e-04
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 43 3e-04
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 43 3e-04
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 43 4e-04
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 43 4e-04
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 43 4e-04
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 42 5e-04
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 42 5e-04
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 42 5e-04
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 42 5e-04
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 42 5e-04
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 41 0.001
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 41 0.001
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 41 0.001
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 41 0.001
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 41 0.001
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 40 0.002
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 40 0.002
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 40 0.002
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 40 0.003
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 40 0.003
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 40 0.003
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 39 0.005
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 39 0.005
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 39 0.005
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 39 0.005
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 39 0.005
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 39 0.005
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 39 0.005
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 39 0.005
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 39 0.005
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 39 0.005
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 39 0.006
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 38 0.008
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 38 0.010
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 38 0.010
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 38 0.014
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 38 0.014
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 38 0.014
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 38 0.014
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 38 0.014
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 37 0.018
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 37 0.018
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 37 0.024
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 37 0.024
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 37 0.024
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 37 0.024
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 36 0.032
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 36 0.032
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 36 0.032
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 36 0.032
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 36 0.032
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 36 0.042
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 36 0.042
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 36 0.042
At5g60900.1 68418.m07640 lectin protein kinase family protein co... 36 0.056
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 36 0.056
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 36 0.056
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 36 0.056
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 36 0.056
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 36 0.056
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 36 0.056
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 35 0.074
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 35 0.074
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 35 0.098
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 35 0.098
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 35 0.098
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 34 0.17
At5g01770.1 68418.m00096 transducin family protein / WD-40 repea... 34 0.17
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 34 0.17
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 34 0.17
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 34 0.17
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 34 0.17
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 34 0.17
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 33 0.23
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 33 0.23
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 33 0.23
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 33 0.30
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 33 0.30
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 33 0.30
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 33 0.39
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 33 0.39
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 33 0.39
At1g71460.1 68414.m08257 pentatricopeptide (PPR) repeat-containi... 33 0.39
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 33 0.39
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 33 0.39
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 32 0.52
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 32 0.52
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 32 0.69
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 31 0.91
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 31 0.91
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 31 0.91
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 31 0.91
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 31 0.91
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 31 0.91
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 31 0.91
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 31 0.91
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 31 0.91
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 31 1.2
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 31 1.2
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 31 1.2
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 31 1.2
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 31 1.6
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 31 1.6
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 31 1.6
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 31 1.6
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 31 1.6
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 31 1.6
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 30 2.1
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 30 2.1
At5g62210.1 68418.m07811 embryo-specific protein-related contain... 30 2.8
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 30 2.8
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 30 2.8
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 29 3.7
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 29 4.9
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 29 4.9
At3g61310.1 68416.m06861 DNA-binding family protein contains a A... 29 4.9
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 29 4.9
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 29 6.4
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 29 6.4
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 29 6.4
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 29 6.4
At1g08315.1 68414.m00918 armadillo/beta-catenin repeat family pr... 29 6.4
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 28 8.5
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 28 8.5
At4g13740.1 68417.m02133 expressed protein 28 8.5
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 28 8.5
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 28 8.5
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 28 8.5
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 28 8.5
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 54.0 bits (124), Expect = 1e-07
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 57 QAHKGAVHAVAYCGDGKKFASGSADRNVIIWT------SKMEGILKYSHSEAIQCLAYNP 110
Q HK VH+VA+ +G K ASGS D+ IW SK + + H++++ L ++P
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDP 76
Query: 111 VTFHLASCAISD--FAFW-SMDIKAVQKHKVSGRITSCAWSPNGQYLVIGLASGAVTFRD 167
L + A D W + K Q+ ++SG + + P+G ++ +G +T D
Sbjct: 77 KHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDGTHVAVGNRDDELTILD 136
Score = 31.1 bits (67), Expect = 1.2
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 53 LQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW-TSKMEGILKYSHSE-AIQCLAYNP 110
L L AH + +A G+ FA GSAD V +W S M + ++ E ++ +++N
Sbjct: 184 LDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNY 243
Query: 111 VTFHLASCAISDFAFWSMDIKAVQK----HKVSGR--ITSCAWSP 149
++AS + F +DI VQ H++ R + S W+P
Sbjct: 244 SGEYIASASEDLF----IDIANVQTGRTVHQIPCRAAMNSVEWNP 284
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 53.6 bits (123), Expect = 2e-07
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Query: 55 LLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEG--ILKYSHSEAIQCLAYNPVT 112
LL H G V++ + G S SAD + +W++K+ + H+ + ++P
Sbjct: 413 LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFG 472
Query: 113 FHLASCAISDFA-FWSMDIKAVQKHKV-SGRITSCAWSPNGQYLVIGLASGAVTFRDKVG 170
+ ASC+ A WSMD +Q ++ +G ++ W PN Y+ G + V D
Sbjct: 473 HYFASCSHDRTARIWSMD--RIQPLRIMAGHLSDVDWHPNCNYIATGSSDKTVRLWDVQT 530
Query: 171 NEIQRI 176
E RI
Sbjct: 531 GECVRI 536
Score = 46.0 bits (104), Expect = 4e-05
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 20 SSVHTLCFSPDGSQLVVGAGE-KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASG 78
S V +L SPDG + G + +M++D + L H V +++Y G+G ASG
Sbjct: 542 SMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASG 601
Query: 79 SADRNVIIW 87
SAD V +W
Sbjct: 602 SADCTVKLW 610
Score = 39.1 bits (87), Expect = 0.005
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 9/130 (6%)
Query: 29 PDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW 87
P+ + + G+ +K V ++D + G +++ H+ V ++A DG+ ASG D +++W
Sbjct: 509 PNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMW 568
Query: 88 TSKMEGILK--YSHSEAIQCLAYNPVTFHLAS----CAIS--DFAFWSMDIKAVQKHKVS 139
+ H+ + L+Y+ LAS C + D + KA +K+ S
Sbjct: 569 DLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNS 628
Query: 140 GRITSCAWSP 149
R+ S P
Sbjct: 629 NRLRSLRTFP 638
Score = 33.9 bits (74), Expect = 0.17
Identities = 35/173 (20%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 22 VHTLCFSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSA 80
V++ FSP G ++ + + + ++ + + L + H V + G FAS S
Sbjct: 421 VYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSH 480
Query: 81 DRNVIIWTSKMEGILKYSHSEAIQCLAYNPVTFHLAS-CAISDFAFWSMDIKAVQKHKVS 139
DR IW+ L+ + + ++P ++A+ + W + + +
Sbjct: 481 DRTARIWSMDRIQPLRIMAGH-LSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIG 539
Query: 140 GR--ITSCAWSPNGQYLVIGLASGAVTFRD-KVGNEIQRIL-REAAVWAVAFS 188
R + S A SP+G+Y+ G G + D I ++ + VW++++S
Sbjct: 540 HRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYS 592
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 53.6 bits (123), Expect = 2e-07
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 7/126 (5%)
Query: 22 VHTLCFSPDGSQLVVGAGE-KVMVYDPRDGSLLQ--LLQAHKGAVHAVAYCGDGKKFASG 78
V L +PDG++ V+G + K+ +Y SL + +L+ H+GA+ + Y D FAS
Sbjct: 450 VTALAVTPDGTEAVIGGQDGKLHLYSINGDSLTEEAVLERHRGAISVIRYSPDLSMFASA 509
Query: 79 SADRNVIIW---TSKMEGILKYSHSEAIQCLAYNPVTFHLASCAISDFAF-WSMDIKAVQ 134
+R ++W + +M+ HS I CLA++P + +A+ ++ + +D A
Sbjct: 510 DLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVDKPASS 569
Query: 135 KHKVSG 140
+ + G
Sbjct: 570 RMTIKG 575
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/70 (35%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 22 VHTLCFSPDGSQLV-VGAGEKVMVYDPRDGSLLQLLQA---HKGAVHAVAYCGDGKKFAS 77
V+ + F+PDGS+ + V + +K ++YD + +L L + HKG+++AV++ DGK+ +
Sbjct: 190 VNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLT 249
Query: 78 GSADRNVIIW 87
SAD++ IW
Sbjct: 250 VSADKSAKIW 259
Score = 33.1 bits (72), Expect = 0.30
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 10/141 (7%)
Query: 25 LCFSPDGSQLVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNV 84
L +P L++ E +V+ RDG ++ + V A+A DG + G D +
Sbjct: 414 LSLAPLSPDLLLVTFESGVVF-LRDGKVVSTINLGF-IVTALAVTPDGTEAVIGGQDGKL 471
Query: 85 IIWT----SKMEGILKYSHSEAIQCLAYNPVTFHLASCAIS-DFAFW---SMDIKAVQKH 136
+++ S E + H AI + Y+P AS ++ + W S ++K
Sbjct: 472 HLYSINGDSLTEEAVLERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNML 531
Query: 137 KVSGRITSCAWSPNGQYLVIG 157
S RI AWSPN + G
Sbjct: 532 YHSARINCLAWSPNSTMVATG 552
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 59 HKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGIL 95
H V+ V + DG KF + S+D+ II+ K IL
Sbjct: 186 HSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEIL 222
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 53.6 bits (123), Expect = 2e-07
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 21 SVHTLCFSPDGSQLVVGAGEKVM-VYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGS 79
SV+ L + G+ LV G EKV+ V+DPR GS L+ H V + G+ SGS
Sbjct: 215 SVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGS 274
Query: 80 ADRNVIIWTSKMEGIL-KYS-HSEAIQCLAYNPVTFHLAS 117
+D + +W + L Y+ H++++ LA NP H+ S
Sbjct: 275 SDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYS 314
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
Query: 29 PDGSQLVVGAGEKVMVYD-PRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW 87
P S VG+ + V P G + + HK +V+A+A G SG ++ + +W
Sbjct: 181 PVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVW 240
Query: 88 TSK--MEGILKYSHSEAIQCLAYNPV-TFHLASCAISDFAFWSM 128
+ + + H++ ++ L + F L+ + S W +
Sbjct: 241 DPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL 284
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 53.6 bits (123), Expect = 2e-07
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 21 SVHTLCFSPDGSQLVVGAGEKVM-VYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGS 79
SV+ L + G+ LV G EKV+ V+DPR GS L+ H V + G+ SGS
Sbjct: 215 SVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGS 274
Query: 80 ADRNVIIWTSKMEGIL-KYS-HSEAIQCLAYNPVTFHLAS 117
+D + +W + L Y+ H++++ LA NP H+ S
Sbjct: 275 SDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYS 314
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
Query: 29 PDGSQLVVGAGEKVMVYD-PRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW 87
P S VG+ + V P G + + HK +V+A+A G SG ++ + +W
Sbjct: 181 PVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVW 240
Query: 88 TSK--MEGILKYSHSEAIQCLAYNPV-TFHLASCAISDFAFWSM 128
+ + + H++ ++ L + F L+ + S W +
Sbjct: 241 DPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL 284
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/90 (28%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 10 KIHEADKIEFSSVHTLCFSPDGSQLV-VGAGEKVMVYDPRDGSLLQLLQA---HKGAVHA 65
K H + + + V+ + +SPDG++ + V + +K M+YD + G + L + HKG+++A
Sbjct: 42 KFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYA 101
Query: 66 VAYCGDGKKFASGSADRNVIIWTSKMEGIL 95
V++ D K+ + SAD++ +W +G +
Sbjct: 102 VSWSPDSKRVLTVSADKSAKVWEVAEDGTI 131
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 8 VNKIHEADKIEFS-SVHTLCFSPDGSQLVVGAGE-KVMVYDPR-DGSLLQ--LLQAHKGA 62
+N ++ KI+ +V SPDG + +VG + K+ +Y D +L + +L+ H+GA
Sbjct: 299 LNGLNILSKIDLGFAVAASVISPDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGA 358
Query: 63 VHAVAYCGDGKKFASGSADRNVIIWTSKMEGILKYS---HSEAIQCLAYNP 110
+ + Y D FASG A+R ++W + + + + H+ I LA++P
Sbjct: 359 LTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSP 409
Score = 37.9 bits (84), Expect = 0.010
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 62 AVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILKYS-----HSEAIQCLAYNP-VTFHL 115
AV A DGK+ G D + I++ + LK H A+ + Y+P +T
Sbjct: 313 AVAASVISPDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSPDLTMFA 372
Query: 116 ASCAISDFAFWSMDIKAVQKHKV---SGRITSCAWSPNGQYLVIG 157
+ A + W + K V+ + + + RI S AWSPN + + G
Sbjct: 373 SGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPNNKMVATG 417
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 22 VHTLCFSPDGSQLVVGAGEK-VMVY--DPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASG 78
+++L +SP+ + G+ + V+VY D S + AH G V+AVA+ D +SG
Sbjct: 402 INSLAWSPNNKMVATGSIDTCVIVYEVDKPASSRITARNAHLGGVNAVAFIDDCTVASSG 461
Query: 79 SADRNVIIW 87
D +V +W
Sbjct: 462 E-DASVRLW 469
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 27 FSPDGSQLVVG-AGEKVMVYDPRDGSL-LQLLQAHKGAVHAVAYCGDGKKFASGSADRNV 84
+SPD + G A + +V+D + L + H ++++A+ + K A+GS D V
Sbjct: 364 YSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPNNKMVATGSIDTCV 423
Query: 85 IIW 87
I++
Sbjct: 424 IVY 426
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 52.4 bits (120), Expect = 5e-07
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 8 VNKIHEADKIEFSSVHTLCFSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAV 66
VN+ + +V + FSPDG QL G+G+ V ++D + L + HK V V
Sbjct: 98 VNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTV 157
Query: 67 AYCGDGKKFASGSADRNVIIWTSK---MEGILKYSHSEAIQCLAYNPVTFHLAS 117
A+ DGK SGS + W K +EG H + I +++ PV HL+S
Sbjct: 158 AWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPV--HLSS 209
Score = 41.9 bits (94), Expect = 6e-04
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 22 VHTLCFSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSA 80
V+ + FSPDG + + +K V +++ G + + + H G V+ V++ D + SGS
Sbjct: 363 VNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSK 422
Query: 81 DRNVIIW---TSKMEGILKYSHSEAIQCLAYNP 110
D + IW T K++ L H++ + + ++P
Sbjct: 423 DSTLKIWEIRTKKLKQDLP-GHADEVFAVDWSP 454
Score = 41.5 bits (93), Expect = 9e-04
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 54 QLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGIL--KYSHSEAIQCLAYNPV 111
Q + H AV V++ DGK+ ASGS D V +W E L H + +A++P
Sbjct: 103 QTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPD 162
Query: 112 TFHLASCAIS-DFAFWSMDIKAVQKHKVSGR---ITSCAWSP 149
HL S + S + W+ ++ ++G IT +W P
Sbjct: 163 GKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEP 204
Score = 37.5 bits (83), Expect = 0.014
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 22 VHTLCFSPDGSQLVVGAGEKVM-VYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSA 80
V+ + +S D L+ G+ + + +++ R L Q L H V AV + DG+K SG
Sbjct: 405 VYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGK 464
Query: 81 DRNVIIW 87
DR + +W
Sbjct: 465 DRVLKLW 471
Score = 34.7 bits (76), Expect = 0.098
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 99 HSEAIQCLAYNPVTFHLAS-CAISDFAFWSM----DIKAVQKHKVSGRITSCAWSPNGQY 153
H+EA+ C++++P LAS + W + + + HK + + AWSP+G++
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHK--NWVLTVAWSPDGKH 165
Query: 154 LVIGLASGAV 163
LV G SG +
Sbjct: 166 LVSGSKSGEI 175
Score = 31.9 bits (69), Expect = 0.69
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Query: 56 LQAHKGAVHAVAYCGDGKKFASGSADRNVIIW---TSKMEGILKYSHSEAIQCLAYNPVT 112
L H+ V+ V + DGK AS S D++V +W T + + + Q
Sbjct: 356 LTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSR 415
Query: 113 FHLASCAISDFAFWSMDIKAVQKHKV--SGRITSCAWSPNGQYLVIG 157
L+ S W + K +++ + + + WSP+G+ +V G
Sbjct: 416 LLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSG 462
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 52.4 bits (120), Expect = 5e-07
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 16/136 (11%)
Query: 53 LQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW----TSKMEGILKY---SHSEAIQC 105
+Q+L AHK V V + GK A+ S+D IIW +K+E LK+ SH +
Sbjct: 217 VQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVE--LKHTLESHQNPVSF 274
Query: 106 LAYNPVTFHLASCAISD-FAFWSMDIKAVQ----KHKVSGRITSCAWSPNGQYLVIGLA- 159
++++P L +C ++ W +D ++ + ++SCAW P+ LV G +
Sbjct: 275 VSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSD 334
Query: 160 -SGAVTFRDKVGNEIQ 174
+ D GNEI+
Sbjct: 335 PERGIVMWDTDGNEIK 350
Score = 35.1 bits (77), Expect = 0.074
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 18 EFSSVHTLCFSPDGSQLVVGAG-EKVMVYDPRDGSLLQLLQ--AHKGAVHAVAYCG---D 71
E + +L S DG +V +++ ++D G Q L+ H+ + + + C D
Sbjct: 396 EEQPITSLSISGDGKFFIVNLSCQEIHLWDLA-GEWKQPLKFSGHRQSKYVIRSCFGGLD 454
Query: 72 GKKFASGSADRNVIIWTSKMEGILKY--SHSEAIQCLAYNPVTFHLASCAISD 122
ASGS D V IW K L+ HS + C+++NP + + A D
Sbjct: 455 SSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDD 507
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 51.6 bits (118), Expect = 8e-07
Identities = 31/123 (25%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 57 QAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILK-YSHSEAIQCLAYNPVT--F 113
Q H V +A+ + S S D+ V +W + LK +SHS+ + C+ +NPV +
Sbjct: 510 QGHVDDVLDLAW-SKSQHLLSSSMDKTVRLWNLSSQTCLKVFSHSDYVTCIQFNPVDDRY 568
Query: 114 HLASCAISDFAFWSM-DIKAVQKHKVSGRITSCAWSPNGQYLVIGLASGAVTFRDKVGNE 172
++ + WS+ D + V + + +TS ++P+GQ +++G G+ N+
Sbjct: 569 FISGSLDAKVRVWSIPDRQVVDWYDLHEMVTSACYTPDGQGVLVGSYKGSCRMYSASDNK 628
Query: 173 IQR 175
+Q+
Sbjct: 629 LQQ 631
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 54 QLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW 87
Q +QAH G++ ++ + DGK AS D + IW
Sbjct: 407 QEIQAHNGSIWSIKFSLDGKYLASAGEDCIIHIW 440
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 51.2 bits (117), Expect = 1e-06
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 54 QLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEG--ILKYS---HSEAIQCLAY 108
Q+L++H V + + +GK AS S D+ IIW +G LK++ H + + + +
Sbjct: 268 QILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILW 327
Query: 109 NPVTFHLASCAISD-FAFWSMDI-KAVQKHKVSG-RITSCAWSPNGQYLVIGLASGAVTF 165
+P + +C + W +D V ++ G SC W P+GQ ++ G+ ++
Sbjct: 328 SPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICM 387
Query: 166 RDKVGNE 172
D G E
Sbjct: 388 WDLDGRE 394
Score = 35.5 bits (78), Expect = 0.056
Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 10/144 (6%)
Query: 22 VHTLCFSPDGSQ-LVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCG---DGKKFAS 77
V + +SPD Q L GA E + +D G + + + KG + ++ CG DG+ +
Sbjct: 322 VIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYE--KGGISPIS-CGWYPDGQGIIA 378
Query: 78 GSADRNVIIW--TSKMEGILKYSHSEAIQCLAYNPVTFHLAS-CAISDFAFWSMDIKAVQ 134
G DR++ +W + + K ++ + +A L S C S + + + +
Sbjct: 379 GMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVER 438
Query: 135 KHKVSGRITSCAWSPNGQYLVIGL 158
+ ITS + S + +Y+++ L
Sbjct: 439 LIEEEDMITSFSLSNDNKYILVNL 462
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 50.4 bits (115), Expect = 2e-06
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 22 VHTLCFSPDGSQL-VVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSA 80
V+ SPDG L +VG + ++ DP G L+ L H A A+ DG F++G+
Sbjct: 280 VNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQ 339
Query: 81 DRNVIIW----TSKMEGILKYSHSEAIQCLAYNPVTFHLASCAISDFAF---WSMDIKAV 133
D+ +W S+ +LK + AI+ + Y ++A +DF S +
Sbjct: 340 DKTCRVWDIRNLSQSVTVLK-GNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETE 398
Query: 134 QKHKVSGRITSCAWSPNGQYLVIGL 158
Q+ G I+ ++SP+ + L IG+
Sbjct: 399 QEIDFFGEISGISFSPDTEALFIGV 423
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 15 DKIEFSSVHTLCFSPDGSQLVVGAGEKVMVYDPRDG--SLLQLLQAHKGAVHAVAYCGDG 72
+K +++ + S DG A +K+ V++ +D SL+ L H AV+A+A DG
Sbjct: 231 EKAHDDAINAIVVSKDGFVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDG 290
Query: 73 KKFASGSADRNVIIWTSKMEGILKYSHSEAIQCL 106
K SG+ DR++++W + G + H + L
Sbjct: 291 KVLYSGACDRSILVWERLINGDDEELHMSVVGAL 324
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 59 HKGAVHAVAYCGDGKKFASGSADRNVIIW-TSKMEGI--LKYSHSEAIQCLAYNPVTFHL 115
H AV ++A DG S S DR+ IW TS + + ++ +H +AI + + F
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVY 250
Query: 116 ASCAISDFAFWSMDIKAVQKHKVSGRIT 143
A W+ K +KH + +T
Sbjct: 251 TGSADKKIKVWN---KKDKKHSLVATLT 275
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 22 VHTLCFSPDGSQLVVGAGEKVM-VYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSA 80
V+ L F+PDG +V G + ++ V+D G LL ++H+G + ++ + A+GSA
Sbjct: 146 VNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSA 205
Query: 81 DRNVIIWTSKMEGILKYSHSE--AIQCLAYNP 110
DR V W + ++ E ++CL++NP
Sbjct: 206 DRTVKFWDLETFELIGSGGPETAGVRCLSFNP 237
Score = 45.2 bits (102), Expect = 7e-05
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 30 DGSQLVVGAGEK---VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVII 86
D S+++V AG + ++D + +++ L H+ +V + G+ FASGS D N+ I
Sbjct: 68 DASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
Query: 87 WTSKMEGILK--YSHSEAIQCLAYNPVTFHLASCAISDFA-FWSMDI-KAVQKHKV-SGR 141
W + +G + H+ + L + P + S + W + K + + K G+
Sbjct: 128 WDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQ 187
Query: 142 ITSCAWSPNGQYLVIGLASGAVTFRD 167
I S + P+ L G A V F D
Sbjct: 188 IQSLDFHPHEFLLATGSADRTVKFWD 213
Score = 29.9 bits (64), Expect = 2.8
Identities = 28/145 (19%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
Query: 20 SSVHTLCFSPDGSQLVVGAGE--KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFAS 77
++V+ L S+++V GE KV ++ + + L H + +V + A+
Sbjct: 17 AAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAA 76
Query: 78 GSADRNVIIWTSKMEGILKYSHSEAIQCLA--YNPVTFHLASCAI-SDFAFWSMDIK-AV 133
G+A + +W + I++ C++ ++P AS ++ ++ W + K +
Sbjct: 77 GAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCI 136
Query: 134 QKHKVSGR-ITSCAWSPNGQYLVIG 157
+K R + ++P+G+++V G
Sbjct: 137 HTYKGHTRGVNVLRFTPDGRWVVSG 161
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 22 VHTLCFSPDGSQLVVGAGEKVM-VYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSA 80
V+ L F+PDG +V G + ++ V+D G LL ++H+G + ++ + A+GSA
Sbjct: 146 VNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSA 205
Query: 81 DRNVIIWTSKMEGILKYSHSE--AIQCLAYNP 110
DR V W + ++ E ++CL++NP
Sbjct: 206 DRTVKFWDLETFELIGSGGPETAGVRCLSFNP 237
Score = 45.2 bits (102), Expect = 7e-05
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 30 DGSQLVVGAGEK---VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVII 86
D S+++V AG + ++D + +++ L H+ +V + G+ FASGS D N+ I
Sbjct: 68 DASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
Query: 87 WTSKMEGILK--YSHSEAIQCLAYNPVTFHLASCAISDFA-FWSMDI-KAVQKHKV-SGR 141
W + +G + H+ + L + P + S + W + K + + K G+
Sbjct: 128 WDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQ 187
Query: 142 ITSCAWSPNGQYLVIGLASGAVTFRD 167
I S + P+ L G A V F D
Sbjct: 188 IQSLDFHPHEFLLATGSADRTVKFWD 213
Score = 29.9 bits (64), Expect = 2.8
Identities = 28/145 (19%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
Query: 20 SSVHTLCFSPDGSQLVVGAGE--KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFAS 77
++V+ L S+++V GE KV ++ + + L H + +V + A+
Sbjct: 17 AAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAA 76
Query: 78 GSADRNVIIWTSKMEGILKYSHSEAIQCLA--YNPVTFHLASCAI-SDFAFWSMDIK-AV 133
G+A + +W + I++ C++ ++P AS ++ ++ W + K +
Sbjct: 77 GAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCI 136
Query: 134 QKHKVSGR-ITSCAWSPNGQYLVIG 157
+K R + ++P+G+++V G
Sbjct: 137 HTYKGHTRGVNVLRFTPDGRWVVSG 161
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 49.6 bits (113), Expect = 3e-06
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
Query: 23 HTLCFSPDGSQL-VVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSAD 81
HT SPDG L +VG + ++ DP G L L H A A+ DG F++G+ D
Sbjct: 280 HT-SLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQD 338
Query: 82 RNVIIW----TSKMEGILKYSHSEAIQCLAYNPVTFHLASCAISDFAF---WSMDIKAVQ 134
+ +W SK +L+ + AI+ + Y ++A +DF S + Q
Sbjct: 339 KTCRVWDIRNLSKSVAVLR-GNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQ 397
Query: 135 KHKVSGRITSCAWSPNGQYLVIGL 158
+ G I+ ++SP+ + L IG+
Sbjct: 398 EIDFFGEISGISFSPDTEALFIGV 421
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 49.6 bits (113), Expect = 3e-06
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 21 SVHTLCFSPDGSQL-VVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGS 79
SV+ SPDG L VVG + ++ D G ++ L+ HK A A+ +G A+G+
Sbjct: 250 SVNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGN 309
Query: 80 ADRNVIIW----TSKMEGILKYSHSEAIQCLAYNPVTFHLASCAISDFA-FWSMDIKAVQ 134
D +W S+ +LK + AI+ L + P LA +DF + +Q
Sbjct: 310 QDTACRLWDIRNPSESFAVLK-GNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSGFLQ 368
Query: 135 KHKVS--GRITSCAWSPNGQYLVIGLA 159
++ G I ++SP+ + L +G+A
Sbjct: 369 SQEIDLFGEIAGISFSPDTEALYVGVA 395
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 48.4 bits (110), Expect = 7e-06
Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 77 SGSADRNVIIWTSKMEGILK-YSHSEAIQCLAYNPV--TFHLASCAISDFAFWSM-DIKA 132
S S D+ V +W + LK +SHS+ + C+ +NPV + ++ + WS+ D +
Sbjct: 484 SSSMDKTVRLWDLSSKTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIPDHQV 543
Query: 133 VQKHKVSGRITSCAWSPNGQYLVIGLASGAVTFRDKVGNEIQR 175
V + + +T+ ++P+GQ ++G G + N++Q+
Sbjct: 544 VDWNDLHEMVTAACYTPDGQGALVGSYKGTCCLYNTHDNKLQQ 586
Score = 31.9 bits (69), Expect = 0.69
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 54 QLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW 87
Q +QAHKG++ ++ + DG+ AS D + IW
Sbjct: 357 QEIQAHKGSIWSIKFSLDGRYLASAGEDCVIQIW 390
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 47.6 bits (108), Expect = 1e-05
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 16 KIEFSSVHTLCFSPDGSQLVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGK-K 74
K +V +LC SPDG +++V A ++ ++ D +Q H G V VA+ DGK
Sbjct: 155 KASTKTVSSLCVSPDG-KILVTASTQLKTFNCSDLKKIQKFTGHPGVVRCVAFTEDGKYV 213
Query: 75 FASGSADRNVIIWTSKMEGILKYSHSEAIQCLAYNPV 111
+S +R + +W K +G K S S + L + PV
Sbjct: 214 LSSAVGERYIAVW--KTDGAKKQSAS-CVLALEHPPV 247
Score = 34.7 bits (76), Expect = 0.098
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 37 GAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILK 96
GA V DP G+L++ +A V ++ DGK + S S ++ I K
Sbjct: 135 GADGMVCQIDPHSGNLIRKFKASTKTVSSLCVSPDGKILVTASTQLKTFN-CSDLKKIQK 193
Query: 97 YS-HSEAIQCLAYNPVTFHLASCAISD--FAFWSMD 129
++ H ++C+A+ ++ S A+ + A W D
Sbjct: 194 FTGHPGVVRCVAFTEDGKYVLSSAVGERYIAVWKTD 229
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 47.6 bits (108), Expect = 1e-05
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 54 QLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILK-YSHSEAIQCLAYNPVT 112
Q L H G V +A+ D S S D+ V +W + + L + H+ + C+ +NPV
Sbjct: 266 QELYGHTGDVLDLAW-SDSNLLLSASKDKTVRLWRTGCDQCLHVFHHNNYVTCVEFNPVN 324
Query: 113 FH-LASCAISDFA-FWSM-DIKAVQKHKVSGRITSCAWSPNGQYLVIGLASGAVTFRDKV 169
+ AS +I A W + + + V V I++ ++ PNG V+G +G F +
Sbjct: 325 KNNFASGSIDGKARIWGLSEERVVAWTDVRDSISAISYQPNGNGFVVGCITGNCRFYQIL 384
Query: 170 GNEI 173
N++
Sbjct: 385 DNDV 388
Score = 31.9 bits (69), Expect = 0.69
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 52 LLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW 87
++Q + HKG + + + DGK A+G D V IW
Sbjct: 190 MVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 47.2 bits (107), Expect = 2e-05
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 8/176 (4%)
Query: 20 SSVHTLCFSPDGSQLVVGAGEKVM-VYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASG 78
S V ++ F+ + ++ GA V+ ++D + +++ H+ AV + G+ ASG
Sbjct: 8 SPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASG 67
Query: 79 SADRNVIIWTSKMEGILK--YSHSEAIQCLAYNPVTFHLASCAISDFA-FWSMDI-KAVQ 134
S+D N+ +W ++ +G ++ H+ I + ++P + S + + W + K +
Sbjct: 68 SSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLH 127
Query: 135 KHKV-SGRITSCAWSPNGQYLVIGLASGAVTFRDKVGNEIQRILREAA--VWAVAF 187
+ K G I S + P L G A V F D E+ R A V A+AF
Sbjct: 128 EFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAF 183
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 46.8 bits (106), Expect = 2e-05
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 10 KIHEADKIEFSSVHTLCFSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAY 68
K+H++ V L +SPD + L+ G+ + +++D GS+ Q+L AH V VA+
Sbjct: 44 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 103
Query: 69 CGDGKKFASGSADRNVIIWTSKMEGILKYSHSEAIQCLAYNPVTFHLASCAISDFAFWSM 128
K AS S+DR I+ +K + + S+ ++ + Y V H+ A +
Sbjct: 104 DPLAKYVASLSSDRTCRIYANKPQ-----TKSKGVEKMNY--VCQHVIMKADQQRGDETK 156
Query: 129 DIKAVQKH--KVSGRITSCAWSPNGQYLVIGLASGAVT 164
IK H + +WSP+G +L+I S V+
Sbjct: 157 TIKTHLFHDETLPSFFRRLSWSPDGSFLLIPAGSFKVS 194
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 46.8 bits (106), Expect = 2e-05
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 10 KIHEADKIEFSSVHTLCFSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAY 68
K+H++ V L +SPD + L+ G+ + +++D GS+ Q+L AH V VA+
Sbjct: 103 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 162
Query: 69 CGDGKKFASGSADRNVIIWTSKMEGILKYSHSEAIQCLAYNPVTFHLASCAISDFAFWSM 128
K AS S+DR I+ +K + + S+ ++ + Y V H+ A +
Sbjct: 163 DPLAKYVASLSSDRTCRIYANKPQ-----TKSKGVEKMNY--VCQHVIMKADQQRGDETK 215
Query: 129 DIKAVQKH--KVSGRITSCAWSPNGQYLVIGLASGAVT 164
IK H + +WSP+G +L+I S V+
Sbjct: 216 TIKTHLFHDETLPSFFRRLSWSPDGSFLLIPAGSFKVS 253
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 46.8 bits (106), Expect = 2e-05
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 10 KIHEADKIEFSSVHTLCFSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAY 68
K+H++ V L +SPD + L+ G+ + +++D GS+ Q+L AH V VA+
Sbjct: 103 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 162
Query: 69 CGDGKKFASGSADRNVIIWTSKMEGILKYSHSEAIQCLAYNPVTFHLASCAISDFAFWSM 128
K AS S+DR I+ +K + + S+ ++ + Y V H+ A +
Sbjct: 163 DPLAKYVASLSSDRTCRIYANKPQ-----TKSKGVEKMNY--VCQHVIMKADQQRGDETK 215
Query: 129 DIKAVQKH--KVSGRITSCAWSPNGQYLVIGLASGAVT 164
IK H + +WSP+G +L+I S V+
Sbjct: 216 TIKTHLFHDETLPSFFRRLSWSPDGSFLLIPAGSFKVS 253
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 46.4 bits (105), Expect = 3e-05
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 17/198 (8%)
Query: 24 TLCFSPDGSQLVVGAGE--KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSAD 81
T F+ G+ L G + +++V+D R + + Q H V+ V Y D + A+G+ D
Sbjct: 311 TAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADD 370
Query: 82 RNVIIWTSKMEG---ILKYSHSEAIQCLAYNPVTFHLASCAISDFAFWSMDIKAVQKHK- 137
V +W + M G I H+ A+ L + L S ++ D + D K + +K
Sbjct: 371 NKVKVW-NVMSGTCFITFTEHTNAVTALHFMADNHSLLSASL-DGTVRAWDFKRYKNYKT 428
Query: 138 ----VSGRITSCAWSPNGQYLVIG-LASGAVTFRDKVGNEIQRIL--REAAVWAVAFSKM 190
+ S P+G + G L S + K +I+ IL EA V + FS +
Sbjct: 429 YTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPL 488
Query: 191 TLLV--TDWNETLSFYTI 206
T L+ + W+ T+ + +
Sbjct: 489 TQLLASSSWDYTVRLWDV 506
Score = 32.3 bits (70), Expect = 0.52
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 22 VHTLCFSPDGSQLVVGAGE-KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSA 80
VH L FSP L + + V ++D H V VA+ DGK+ AS +
Sbjct: 480 VHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTL 539
Query: 81 DRNVIIWTSKMEGILKYS 98
D + W + +EG+L Y+
Sbjct: 540 DGQINFWDT-IEGVLMYT 556
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 46.4 bits (105), Expect = 3e-05
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 17/198 (8%)
Query: 24 TLCFSPDGSQLVVGAGE--KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSAD 81
T F+ G+ L G + +++V+D R + + Q H V+ V Y D + A+G+ D
Sbjct: 351 TAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADD 410
Query: 82 RNVIIWTSKMEG---ILKYSHSEAIQCLAYNPVTFHLASCAISDFAFWSMDIKAVQKHK- 137
V +W + M G I H+ A+ L + L S ++ D + D K + +K
Sbjct: 411 NKVKVW-NVMSGTCFITFTEHTNAVTALHFMADNHSLLSASL-DGTVRAWDFKRYKNYKT 468
Query: 138 ----VSGRITSCAWSPNGQYLVIG-LASGAVTFRDKVGNEIQRIL--REAAVWAVAFSKM 190
+ S P+G + G L S + K +I+ IL EA V + FS +
Sbjct: 469 YTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPL 528
Query: 191 TLLV--TDWNETLSFYTI 206
T L+ + W+ T+ + +
Sbjct: 529 TQLLASSSWDYTVRLWDV 546
Score = 32.3 bits (70), Expect = 0.52
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 22 VHTLCFSPDGSQLVVGAGE-KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSA 80
VH L FSP L + + V ++D H V VA+ DGK+ AS +
Sbjct: 520 VHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTL 579
Query: 81 DRNVIIWTSKMEGILKYS 98
D + W + +EG+L Y+
Sbjct: 580 DGQINFWDT-IEGVLMYT 596
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 46.4 bits (105), Expect = 3e-05
Identities = 36/163 (22%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 30 DGSQLVVGAG---EKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVII 86
D Q ++ AG +K++ +D G + Q H GAV+ + + + ++F + S D+++ +
Sbjct: 379 DDKQNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 438
Query: 87 WTSKMEGILKY---SHSEAIQCLAYNPVTFHLASCAISD--------FAFWSMDIKAVQK 135
W + ++KY H ++ ++ +P LA+ ++ + F K
Sbjct: 439 WEFGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 498
Query: 136 HKVSGRITSCAWSPNGQYLVIGLASGAVTFRDKVGNEIQRILR 178
H V+G +SP+G++++ G G F D ++ R L+
Sbjct: 499 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 541
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 22 VHTLCFSPDGSQLVVGAGE--KVMVYDP-RDGSLLQLLQAHKGAVHAVAYCGDGKKFASG 78
V + F P L++ AG KV ++D G ++ H AV + + DG KF +
Sbjct: 285 VSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTA 344
Query: 79 SADRNVIIW-TSKMEGILKYSHSEAIQCLAYNP 110
D+N+ W T + I +S + + NP
Sbjct: 345 GYDKNIKYWDTETGQVISTFSTGKIPYVVKLNP 377
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 21 SVHTLCFSPDGSQ-LVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKK--FAS 77
+V +CFS DGS+ L G + + +D G ++ K D K+ +
Sbjct: 328 AVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLA 387
Query: 78 GSADRNVIIW 87
G +D+ ++ W
Sbjct: 388 GMSDKKIVQW 397
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 46.0 bits (104), Expect = 4e-05
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 9/138 (6%)
Query: 27 FSPDGSQLVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVII 86
FSP L + ++ DG+LLQ + H + VA+ GK + S D+ +
Sbjct: 306 FSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRL 365
Query: 87 W--TSKMEGILKYSHSEAIQCLAYNPVTFHLASCAISDFA-FWSM----DIKAVQKHKVS 139
W + E +L+ HS ++ +A+ ASC + A W + I Q H
Sbjct: 366 WDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGH--I 423
Query: 140 GRITSCAWSPNGQYLVIG 157
+ S +SPNG +L G
Sbjct: 424 KPVFSVNFSPNGYHLASG 441
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 5/112 (4%)
Query: 21 SVHTLCFSPDGSQLV-VGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGS 79
SV+ + F DG+ G V+D R G + + Q H V +V + +G ASG
Sbjct: 383 SVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGG 442
Query: 80 ADRNVIIWTSKMEGILKY--SHSEAIQCLAYNPVTFHLASCAISDFA--FWS 127
D IW +M L +H+ + + Y P + + A D WS
Sbjct: 443 EDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWS 494
Score = 35.1 bits (77), Expect = 0.074
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 41 KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTS 89
KV ++ RD SL++ L H+ V ++ D A+ S DR + +WTS
Sbjct: 489 KVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTS 537
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 45.6 bits (103), Expect = 5e-05
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 27 FSPDGSQLVV-GAGEKVMVYDPRDGSLLQLLQA-HKGAVHAVAYCGDGKKFASGSADRNV 84
+SPDG L V G V++YD G L L+ H A+ + + +GK A+ D+ V
Sbjct: 203 WSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQV 262
Query: 85 IIW-TSKMEGILKYSHSEAIQCLAYNP 110
++W K + I ++ E I C+++ P
Sbjct: 263 LLWDVDKKQDIDRHKFEERICCMSWKP 289
Score = 38.7 bits (86), Expect = 0.006
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 71 DGKKFASGSADRNVIIW---TSKMEGILKYSHSEAIQCLAYNPVTFHLASCAIS-DFAFW 126
DG+ A +V+++ T + L+ H EAI L + P ++A+ + W
Sbjct: 206 DGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLW 265
Query: 127 SMDIKA-VQKHKVSGRITSCAWSPNGQYLVIGLASG 161
+D K + +HK RI +W PNG L + A G
Sbjct: 266 DVDKKQDIDRHKFEERICCMSWKPNGNALSVIDAKG 301
Score = 38.3 bits (85), Expect = 0.008
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 22 VHTLCFSPDGSQLVV-GAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSA 80
+ L F+ GS L G E + + + DGS++++L+ HKG V + + +G+ AS
Sbjct: 107 IRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDT 166
Query: 81 DRNVIIWTSKMEGILKYS 98
V+ W G++ ++
Sbjct: 167 TGTVLCW-ELQNGVVSFT 183
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 45.2 bits (102), Expect = 7e-05
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 6/154 (3%)
Query: 20 SSVHTLCFSPDGSQLVVGAGEKVM-VYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASG 78
S+V ++ F ++ GA V+ ++D + +++ H+ AV + G+ ASG
Sbjct: 59 SAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASG 118
Query: 79 SADRNVIIWTSKMEGILK--YSHSEAIQCLAYNPVTFHLASCAISDFA-FWSMDI-KAVQ 134
S+D N+ IW + +G ++ HS I + + P + S + + W + K +
Sbjct: 119 SSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLH 178
Query: 135 KHKV-SGRITSCAWSPNGQYLVIGLASGAVTFRD 167
+ K G I S + P L G A V F D
Sbjct: 179 EFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWD 212
Score = 42.3 bits (95), Expect = 5e-04
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 22 VHTLCFSPDGSQLVVGAGEKVM-VYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSA 80
+ T+ F+PDG +V G + V+ V+D G LL + H+G + ++ + A+GSA
Sbjct: 145 ISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSA 204
Query: 81 DRNVIIWTSKMEGILKYSHSEA--IQCLAYNP 110
DR V W + ++ + EA ++ + ++P
Sbjct: 205 DRTVKFWDLETFELIGSTRPEATGVRSIKFHP 236
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 44.8 bits (101), Expect = 9e-05
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 6/123 (4%)
Query: 57 QAHKGAVHAVAYCGDGKKFASGSADRNVIIWT--SKMEGILKYSHSEAIQCLAYNPV--T 112
+ H G + +++ G +S S D V +W S E I +SH + C+A+NPV
Sbjct: 360 RGHTGEILDLSWSEKGFLLSS-SVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDN 418
Query: 113 FHLASCAISDFAFWSM-DIKAVQKHKVSGRITSCAWSPNGQYLVIGLASGAVTFRDKVGN 171
+ ++ W + + V + +T+ + P+G+ V+G +G F N
Sbjct: 419 YFISGSIDGKVRIWDVSQFRVVDYTDIRQIVTALCYRPDGKGAVVGSMTGECRFYHTTDN 478
Query: 172 EIQ 174
++Q
Sbjct: 479 QLQ 481
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 44.4 bits (100), Expect = 1e-04
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 30 DGSQLVVGA---GEKVMVYDPRDGSLLQL-----------LQAHKGAVHAVAYCGDGKKF 75
+G +L VGA G V+ RD S+LQ L HK V + + D ++
Sbjct: 291 EGHRLRVGALAWGSSVLSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNREL 350
Query: 76 ASGSADRNVIIWTS-KMEGILKYS-HSEAIQCLAYNP-VTFHLAS---CAISDFAFWSMD 129
ASG D + +W + +LKYS H+ A++ +A++P V LAS A FW+
Sbjct: 351 ASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTT 410
Query: 130 IKA-VQKHKVSGRITSCAWSPNGQYLV 155
+ ++ + AWS N LV
Sbjct: 411 TNTHLSSIDTCSQVCNLAWSKNVNELV 437
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 13 EADKIEFSSVHTLCFSPDGSQLVVGAGEKVMVYDPRDG----SLLQLLQAHKGAVHAVAY 68
E+ K +V+ + S +G+ A ++ V+ G +L+ L+ HK AV+A+A
Sbjct: 229 ESIKAHDDAVNAIAVSTNGTVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALAL 288
Query: 69 CGDGKKFASGSADRNVIIW 87
DG SGS DR++++W
Sbjct: 289 NDDGSVLFSGSCDRSILVW 307
Score = 34.3 bits (75), Expect = 0.13
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 17 IEFSSVHTLCFSPDGSQLVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFA 76
IE + T DG V + + ++ D + ++AH AV+A+A +G +
Sbjct: 192 IEHADAVTALAVSDGFIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGTVY- 250
Query: 77 SGSADRNVIIWTSKMEGILKYS-------HSEAIQCLAYN 109
+GSADR + +W +K G +++ H A+ LA N
Sbjct: 251 TGSADRRIRVW-AKPTGEKRHTLVATLEKHKSAVNALALN 289
Score = 32.3 bits (70), Expect = 0.52
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 20 SSVHTLCFSPDGSQLVVGAGEK-VMVYDPRDGS----LLQLLQAHKGAVHAVAYCGDGKK 74
S+V+ L + DGS L G+ ++ ++V++ D S + L+ H A+ ++ D
Sbjct: 281 SAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSLFNVSD--L 338
Query: 75 FASGSADRNVIIW 87
SGSADR V IW
Sbjct: 339 LLSGSADRTVRIW 351
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 44.0 bits (99), Expect = 2e-04
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 20 SSVHTLCFSPDGSQLVVGAGE-KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASG 78
S + ++ F + GA + ++D + +++ L H+ +V + G+ FASG
Sbjct: 153 SGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASG 212
Query: 79 SADRNVIIWTSKMEGILK--YSHSEAIQCLAYNPVTFHLASCAISDFA-FWSMDI-KAVQ 134
S D N+ IW + +G + H+ + L + P + S + W + K +
Sbjct: 213 SLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLH 272
Query: 135 KHKV-SGRITSCAWSPNGQYLVIGLASGAVTFRD 167
+ K G+I S + P+ L G A V F D
Sbjct: 273 EFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWD 306
Score = 30.3 bits (65), Expect = 2.1
Identities = 30/161 (18%), Positives = 69/161 (42%), Gaps = 7/161 (4%)
Query: 20 SSVHTLCFSPDGSQLVVGAGE--KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFAS 77
++V+ L S+++V GE KV ++ + + L H + +V + A+
Sbjct: 110 AAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAA 169
Query: 78 GSADRNVIIWTSKMEGILKYSHSEAIQCLAYN--PVTFHLASCAI-SDFAFWSMDIK-AV 133
G+A + +W + +++ C++ N P AS ++ ++ W + K +
Sbjct: 170 GAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCI 229
Query: 134 QKHKVSGR-ITSCAWSPNGQYLVIGLASGAVTFRDKVGNEI 173
+K R + ++P+G+++V G V D ++
Sbjct: 230 HTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKL 270
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 44.0 bits (99), Expect = 2e-04
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 22 VHTLCFSP-DGSQLVVGAGE-KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGS 79
V +L FSP D L G+ + V ++D +LL + H V +V DG A+GS
Sbjct: 203 VRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGS 262
Query: 80 ADRNVIIWTSKMEGILK--YSHSEAIQCLAYNP 110
+DR V +W KM ++ +H++ + +A+ P
Sbjct: 263 SDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRP 295
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 44.0 bits (99), Expect = 2e-04
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 8/145 (5%)
Query: 28 SPDGSQLVVG-AGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVII 86
S S + VG A + ++D G+ +HKGAV A+ Y G ASGS D ++I+
Sbjct: 73 SSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIIL 132
Query: 87 WTSKME-GILKY-SHSEAIQCLAYNPVTFHLASCAISDF-AFWSMDIKAVQKHKVSG--- 140
W E G+ + H + + L + L S + F W ++ + + VSG
Sbjct: 133 WDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQ-IVSGHHS 191
Query: 141 RITSCAWSPNGQYLVIGLASGAVTF 165
+ S P +Y+V G A + F
Sbjct: 192 EVWSVDTDPEERYVVTGSADQELRF 216
Score = 33.9 bits (74), Expect = 0.17
Identities = 34/144 (23%), Positives = 56/144 (38%), Gaps = 10/144 (6%)
Query: 22 VHTLCFSPDGSQLVVGAGEKVMVYDPRDGSLLQL-LQAHKGAVHAVAYCGDGKKFASGSA 80
V + SPD + V + + D L L HK V + DG+ +GS
Sbjct: 543 VLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQ 602
Query: 81 DRNVIIWTSKMEGILK--YSHSEAIQCLAYNPVTFHLASCAISDFA-FWSMD----IKAV 133
D+N+ IW K ++H +++ + + T +L S +W D + +
Sbjct: 603 DKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTL 662
Query: 134 QKHKVSGRITSCAWSPNGQYLVIG 157
+ H I A S G +LV G
Sbjct: 663 EGH--HAEIWCLAISNRGDFLVTG 684
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 44.0 bits (99), Expect = 2e-04
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 19/181 (10%)
Query: 27 FSPDGSQLVVGAGE-KVMVYDPRDGSLLQLLQAHKGAVHAVAYC---GDGKKFASGSADR 82
F+PDG + G+ + ++V++P+ + +++ H + + SGS D
Sbjct: 205 FTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDG 264
Query: 83 NVIIW---TSKMEGILKYSHSEAIQCLAYNP--VTFHLASCAISD--FAFWSMDIKA--- 132
+V I T K+ L SH+++++C+ ++P T LA+ D W +
Sbjct: 265 SVHIVNIVTGKVVSSLN-SHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRF 323
Query: 133 VQKHKVSGRITSCAWSPNGQYLVIGLASGAVTFRDK-VGNEIQRIL-REAAVWAVAFSKM 190
+ +H+ +TS W +YL G A+G V+ D +GN + + AV A++ S
Sbjct: 324 ICEHEEG--VTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTN 381
Query: 191 T 191
T
Sbjct: 382 T 382
Score = 39.1 bits (87), Expect = 0.005
Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 21 SVHTLCFSPDGSQLVV----GAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFA 76
SV + FSP + + + G +K++++D + S + + H+ V ++ + G K A
Sbjct: 286 SVECVKFSPSSATIPLAATGGMDKKLIIWDLQH-STPRFICEHEEGVTSLTWIGTSKYLA 344
Query: 77 SGSADRNVIIWTSKMEGILK--YSHSEAIQCLAYNPVTFHLASCAISDFA 124
+G A+ V IW S + + + H +A+Q ++ + T + S ++ + A
Sbjct: 345 TGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTA 394
Score = 37.1 bits (82), Expect = 0.018
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Query: 22 VHTLCFSPDGSQLVV--GAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGS 79
++ L SP + LV G +K ++ +G L HK +V +A+ DG+ ASG
Sbjct: 73 LYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGG 132
Query: 80 ADRNVIIWTSKMEGILKY---SHSEAIQCLAYNPVTFHLASCAISDFAFWSMDI-KAVQK 135
D V I+ + G LK I+ + ++P H+ D + W + K
Sbjct: 133 LDGVVQIFDAS-SGTLKCVLDGPGAGIEWVRWHP-RGHIVLAGSEDCSLWMWNADKEAYL 190
Query: 136 HKVSG---RITSCAWSPNGQYLVIG 157
+ SG +T ++P+G+ + G
Sbjct: 191 NMFSGHNLNVTCGDFTPDGKLICTG 215
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 29 PDGSQLVVGAGE-KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW 87
P G ++ G+ + + +++ + L + H V + DGK +GS D ++I+W
Sbjct: 165 PRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVW 224
Query: 88 TSK-MEGILKYS----HSEAIQCLAYN 109
K E I H+E + CL N
Sbjct: 225 NPKTCESIHIVKGHPYHTEGLTCLDIN 251
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 43.2 bits (97), Expect = 3e-04
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 23/184 (12%)
Query: 22 VHTLCFSPDGSQLVVGAGE-KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSA 80
V + S DG + G+ + ++ ++D G + H V +VA+ D ++ S S
Sbjct: 66 VEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASR 125
Query: 81 DRNVIIWTSKMEGILKYS------HSEAIQCLAYNPVTFHLASCAISDFAFWSMDIKA-- 132
DR + +W + G KY+ H E + C+ ++P T L +S A W +K
Sbjct: 126 DRTIKLWNTL--GECKYTISEGDGHKEWVSCVRFSPNT--LVPTIVS--ASWDKTVKVWN 179
Query: 133 VQKHKV-------SGRITSCAWSPNGQYLVIGLASGAVTFRDKV-GNEIQRILREAAVWA 184
+Q K+ SG + + A SP+G G G + D G ++ + + + +
Sbjct: 180 LQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHS 239
Query: 185 VAFS 188
+ FS
Sbjct: 240 LCFS 243
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Query: 42 VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILKYS--H 99
V V++ ++ L L H G ++ VA DG ASG D +++W EG YS
Sbjct: 175 VKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLW-DLAEGKKLYSLEA 233
Query: 100 SEAIQCLAYNPVTFHLASCAISDFAFWSMDIKAV 133
I L ++P + L + + W ++ K+V
Sbjct: 234 GSIIHSLCFSPNRYWLCAATENSIRIWDLESKSV 267
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 22 VHTLCFSPDGSQLV-VGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSA 80
V +L FS DGSQL+ + ++ + G LL+ + H V+ + DG + + S+
Sbjct: 308 VTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASS 367
Query: 81 DRNVIIWTSKMEGILK 96
D V +W SK L+
Sbjct: 368 DCTVKVWDSKTTDCLQ 383
Score = 32.7 bits (71), Expect = 0.39
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 27 FSPDGSQLVVGAGE-KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVI 85
FS D L G+ + K+ ++ R G ++ AH V ++++ DG + S S D+
Sbjct: 271 FSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTAR 330
Query: 86 IWTSKMEGILK 96
I K +LK
Sbjct: 331 IHGLKSGKLLK 341
Score = 30.7 bits (66), Expect = 1.6
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 13/100 (13%)
Query: 23 HTLC--FSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQ--------AHKGAVHAVAYCGD 71
H C FSPDG L + + + V+D G L + LQ H V + + D
Sbjct: 215 HAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRD 274
Query: 72 GKKFASGSADRNVIIWTSKMEGILKY--SHSEAIQCLAYN 109
+ ASGS D + IW + ++ +HS+ + L+++
Sbjct: 275 SEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFS 314
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 42.7 bits (96), Expect = 4e-04
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 37 GAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGIL- 95
G V +Y P L+ L+ H A+ V + DG AS S D+ +I+W++ ++
Sbjct: 22 GTSGNVPIYKPYRH--LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIH 79
Query: 96 KY-SHSEAIQCLAYNPVTFHLASCAISD 122
+Y HS I LA++ + + +C+ SD
Sbjct: 80 RYEGHSSGISDLAWSSDSHY--TCSASD 105
Score = 40.7 bits (91), Expect = 0.001
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 27 FSPDGSQLVVGA-GEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVI 85
F+P + +V G+ E + +++ + G +++++AH + +V + DG S S D +
Sbjct: 136 FNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCK 195
Query: 86 IWTSKMEGILKY---SHSEAIQCLAYNP------VTFHLASCAISDFAFWS-MDIKAVQK 135
IW +K LK S A+ ++P V ++ +S++A + +
Sbjct: 196 IWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHT 255
Query: 136 HKVSGRITSCAWSPNGQYLVIGLASGAVTFRD-KVGNEIQRI 176
+KV ITS NG+Y+V G V D + N +QR+
Sbjct: 256 NKVF-CITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRL 296
Score = 33.5 bits (73), Expect = 0.23
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 14/148 (9%)
Query: 20 SSVHTLCFSPDGSQLVVGAGEKVM-VYDPRDG-SLLQLLQAHKGAVHAVAYCGDGKKFAS 77
S + L +S D + + + ++D R L++L+ H V V + S
Sbjct: 86 SGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVS 145
Query: 78 GSADRNVIIW---TSKMEGILKYSHSEAIQCLAYN------PVTFHLASCAISDFAFWSM 128
GS D + IW T K ++K +HS I + +N H SC I D A
Sbjct: 146 GSFDETIRIWEVKTGKCVRMIK-AHSMPISSVHFNRDGSLIVSASHDGSCKIWD-AKEGT 203
Query: 129 DIKAVQKHKVSGRITSCAWSPNGQYLVI 156
+K + K S ++ +SPNG+++++
Sbjct: 204 CLKTLIDDK-SPAVSFAKFSPNGKFILV 230
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 42.7 bits (96), Expect = 4e-04
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 23/184 (12%)
Query: 22 VHTLCFSPDGSQLVVGAGE-KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSA 80
V + S DG + G+ + ++ ++D G + H V +VA+ D ++ S S
Sbjct: 66 VQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASR 125
Query: 81 DRNVIIWTSKMEGILKYS------HSEAIQCLAYNPVTFHLASCAISDFAFWSMDIKA-- 132
DR + +W + G KY+ H E + C+ ++P T L +S A W +K
Sbjct: 126 DRTIKLWNTL--GECKYTISEADGHKEWVSCVRFSPNT--LVPTIVS--ASWDKTVKVWN 179
Query: 133 VQKHKV-------SGRITSCAWSPNGQYLVIGLASGAVTFRDKV-GNEIQRILREAAVWA 184
+Q K+ SG + + A SP+G G G + D G ++ + + + +
Sbjct: 180 LQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHS 239
Query: 185 VAFS 188
+ FS
Sbjct: 240 LCFS 243
Score = 41.9 bits (94), Expect = 6e-04
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 3 TLPKWVNKIHEADKIEFSSVHTLCFSPDG--SQLVVGAGEK-VMVYDPRDGSLLQLLQAH 59
TL + I EAD + V + FSP+ +V + +K V V++ ++ L L H
Sbjct: 134 TLGECKYTISEADGHK-EWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGH 192
Query: 60 KGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILKYS--HSEAIQCLAYNPVTFHLAS 117
G ++ VA DG ASG D +++W EG YS I L ++P + L +
Sbjct: 193 SGYLNTVAVSPDGSLCASGGKDGVILLW-DLAEGKKLYSLEAGSIIHSLCFSPNRYWLCA 251
Query: 118 CAISDFAFWSMDIKAV 133
+ W ++ K+V
Sbjct: 252 ATENSIRIWDLESKSV 267
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 42.7 bits (96), Expect = 4e-04
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 27 FSPDGSQ--LVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRN 83
FSP+ Q +V + +K V V++ + L L H G V VA DG ASG D
Sbjct: 158 FSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV 217
Query: 84 VIIWTSKMEGILKYS--HSEAIQCLAYNPVTFHLASCAISDFAFWSMDIKAV 133
V++W EG YS + I L ++P + L + W ++ K++
Sbjct: 218 VLLW-DLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSI 268
Score = 39.5 bits (88), Expect = 0.003
Identities = 39/181 (21%), Positives = 77/181 (42%), Gaps = 16/181 (8%)
Query: 22 VHTLCFSPDGSQLVVGAGE-KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSA 80
V + S DG + G+ + ++ ++D G + H V +VA+ D ++ S S
Sbjct: 66 VEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR 125
Query: 81 DRNVIIWTSKMEGILKYS-------HSEAIQCLAYNPVTFHLASCAIS---DFAFWSMDI 130
DR + +W + G KY+ H + + C+ ++P T + S W++
Sbjct: 126 DRTIKLWNTL--GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN 183
Query: 131 KAVQKHKV--SGRITSCAWSPNGQYLVIGLASGAVTFRDKV-GNEIQRILREAAVWAVAF 187
++ +G +++ A SP+G G G V D G ++ + + + A+ F
Sbjct: 184 CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCF 243
Query: 188 S 188
S
Sbjct: 244 S 244
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 42 VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILK-YSHS 100
V ++D G +L H+ V+++A+ +G+ ASGS D+++ IW+ K I+K Y+ +
Sbjct: 523 VKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGN 582
Query: 101 EAIQCLAYNPVTFHLASC 118
I + +N +A+C
Sbjct: 583 GGIFEVCWNKEGNKIAAC 600
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 22 VHTLCFSPDGSQLVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSAD 81
V TL ++ +G+ L G+ + +G L+ L HKG + ++ + G +GS D
Sbjct: 327 VTTLDWNGEGTLLATGSCDGQARIWTLNGELISTLSKHKGPIFSLKWNKKGDYLLTGSVD 386
Query: 82 RNVIIWTSKME 92
R ++W K E
Sbjct: 387 RTAVVWDVKAE 397
Score = 32.7 bits (71), Expect = 0.39
Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 18/206 (8%)
Query: 2 RTLPKWVNKIHE-ADKIEFSSVHTLCFSPDGSQLVVGAGEKVMVYDPRDGSL--LQLLQA 58
RT W K E + EF S TL + + M+Y + G +
Sbjct: 387 RTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRPAKTFTG 446
Query: 59 HKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILK--YSHSEAIQCLAYNPV----- 111
H+G V+ V + G AS S D IW K + H++ I + ++P
Sbjct: 447 HQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTN 506
Query: 112 ----TFHLASCAI-SDFAFWSMDIKAVQKHKVSGR--ITSCAWSPNGQYLVIGLASGAV- 163
LAS + S W ++ + R + S A+SPNG+Y+ G ++
Sbjct: 507 NPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIH 566
Query: 164 TFRDKVGNEIQRILREAAVWAVAFSK 189
+ K G ++ ++ V ++K
Sbjct: 567 IWSIKEGKIVKTYTGNGGIFEVCWNK 592
Score = 30.3 bits (65), Expect = 2.1
Identities = 45/177 (25%), Positives = 64/177 (36%), Gaps = 35/177 (19%)
Query: 53 LQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILKYSH------------- 99
+++L+ H V A A+ ASGS D IW S EG K H
Sbjct: 258 VRILEGHTSEVCACAWSPSASLLASGSGDATARIW-SIPEGSFKAVHTGRNINALILKHA 316
Query: 100 -------SEAIQCLAYNPVTFHLASCAISDFA-FWSMD---IKAVQKHKVSGRITSCAWS 148
S+ + L +N LA+ + A W+++ I + KHK G I S W+
Sbjct: 317 KGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNGELISTLSKHK--GPIFSLKWN 374
Query: 149 PNGQYLVIGLASGAVTFRDKVGNEIQRILREAAVWAVAFSKMTLLVTDWNETLSFYT 205
G YL+ G D E ++ F L DW +SF T
Sbjct: 375 KKGDYLLTGSVDRTAVVWDVKAEEWKQ--------QFEFHSGPTLDVDWRNNVSFAT 423
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 42.3 bits (95), Expect = 5e-04
Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 7/145 (4%)
Query: 20 SSVHTLCFSPDGSQLVVGAGEKVM-VYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASG 78
+ + + FS D +V + +K + ++D GSL++ L H V + SG
Sbjct: 72 NGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSG 131
Query: 79 SADRNVIIWTSKMEGILKY--SHSEAIQCLAYNPVTFHLASCAISDFA-FWSMDIKAVQK 135
S D V IW LK +HS+ + + +N + S + W K
Sbjct: 132 SFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVK 191
Query: 136 HKVSGR---ITSCAWSPNGQYLVIG 157
+ ++ +SPNG+++++G
Sbjct: 192 TLIDDENPPVSFVRFSPNGKFILVG 216
Score = 37.5 bits (83), Expect = 0.014
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 30 DGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWT 88
+G ++V G+ + V +++ LLQ L+ H V VA ASGS D+ V IWT
Sbjct: 254 NGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWT 313
Query: 89 SKME 92
K E
Sbjct: 314 QKKE 317
Score = 35.5 bits (78), Expect = 0.056
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 27 FSPDGSQLVVGAGEKVM-VYDPRDGSLLQLLQAHKGAVHAVAYC---GDGKKFASGSADR 82
FSP+G ++VG + + +++ L+ H A + ++ +GK+ SGS D
Sbjct: 206 FSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDN 265
Query: 83 NVIIWTSKMEGILK--YSHSEAIQCLAYNPVTFHLAS 117
V +W + +L+ H+E + +A +P +AS
Sbjct: 266 CVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIAS 302
Score = 34.3 bits (75), Expect = 0.13
Identities = 31/149 (20%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 21 SVHTLCFSPDGSQLVVGAGEKVM-------VYDPRDGSLLQLLQAHKGAVHAVAYCGDGK 73
+V ++ FS DG L + +K + + DP +Q H+ + VA+ D +
Sbjct: 26 AVSSVKFSSDGRLLASASADKTIRTYTINTINDPI-AEPVQEFTGHENGISDVAFSSDAR 84
Query: 74 KFASGSADRNVIIWTSKMEGILK--YSHSEAIQCLAYNPVTFHLASCAISD-FAFWSMD- 129
S S D+ + +W + ++K H+ C+ +NP + + S + + W +
Sbjct: 85 FIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTT 144
Query: 130 ---IKAVQKHKVSGRITSCAWSPNGQYLV 155
+K + H S +T+ ++ +G +V
Sbjct: 145 GKCLKVLPAH--SDPVTAVDFNRDGSLIV 171
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 54 QLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWT 88
Q L +H AV +V + DG+ AS SAD+ + +T
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYT 52
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 42.3 bits (95), Expect = 5e-04
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 57 QAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILK-YSHSEAIQCLAYNPVT 112
+ H GAV +++ G+ ASGS D +V +W + LK + EAI C+A+NP++
Sbjct: 420 KGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAIMCVAWNPLS 476
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 42.3 bits (95), Expect = 5e-04
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 10/141 (7%)
Query: 37 GAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEG--I 94
G +++D G +L L H V +V + GD + SAD+ V IW + +G
Sbjct: 241 GVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYA 300
Query: 95 LKYS---HSEAIQCLAYNPVTFHLASCAI-SDFAFWSMD----IKAVQKHKVSGRITSCA 146
Y+ HS ++ + +P + S ++ + F+ + + V + T+ A
Sbjct: 301 CGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAA 360
Query: 147 WSPNGQYLVIGLASGAVTFRD 167
+ P+G L G + V D
Sbjct: 361 FHPDGLILGTGTSQSVVKIWD 381
Score = 35.9 bits (79), Expect = 0.042
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 45 YDPRDGSLL-QLLQAHKGAVH-AVAYCGDGKKFASGSADRNVIIWTSKMEG-ILKYS-HS 100
YD GS L Q+ K + A A+ DG +G++ V IW K + + K+ H+
Sbjct: 336 YDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHT 395
Query: 101 EAIQCLAYNPVTFHLASCAISDFAFWSMDIKAVQKHKVSGRITSCAWSPNGQYLVI 156
+ ++++ + LA+ A W + K +S S + P+G YL I
Sbjct: 396 GEVTAISFSENGYFLATAAEDGVRLWDLRKLRNFKSFLSADANSVEFDPSGSYLGI 451
Score = 35.1 bits (77), Expect = 0.074
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 11/140 (7%)
Query: 27 FSPDGSQLVVGAGEKVM-VYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVI 85
F PDG L G + V+ ++D + + + H G V A+++ +G F + +A+ V
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENG-YFLATAAEDGVR 419
Query: 86 IWTSKMEGILKYSHSEAIQCLAYNPVTFHLASCA--------ISDFAFWSMDIKAVQKHK 137
+W + K S + ++P +L A S A W++ IK +
Sbjct: 420 LWDLRKLRNFKSFLSADANSVEFDPSGSYLGIAASDIKVYQTASVKAEWNL-IKTLPDLS 478
Query: 138 VSGRITSCAWSPNGQYLVIG 157
+G+ T + + QY+ +G
Sbjct: 479 GTGKATCVKFGSDAQYVAVG 498
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 42.3 bits (95), Expect = 5e-04
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 10/141 (7%)
Query: 37 GAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEG--I 94
G +++D G +L L H V +V + GD + SAD+ V IW + +G
Sbjct: 241 GVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYA 300
Query: 95 LKYS---HSEAIQCLAYNPVTFHLASCAI-SDFAFWSMD----IKAVQKHKVSGRITSCA 146
Y+ HS ++ + +P + S ++ + F+ + + V + T+ A
Sbjct: 301 CGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAA 360
Query: 147 WSPNGQYLVIGLASGAVTFRD 167
+ P+G L G + V D
Sbjct: 361 FHPDGLILGTGTSQSVVKIWD 381
Score = 35.9 bits (79), Expect = 0.042
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 45 YDPRDGSLL-QLLQAHKGAVH-AVAYCGDGKKFASGSADRNVIIWTSKMEG-ILKYS-HS 100
YD GS L Q+ K + A A+ DG +G++ V IW K + + K+ H+
Sbjct: 336 YDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHT 395
Query: 101 EAIQCLAYNPVTFHLASCAISDFAFWSMDIKAVQKHKVSGRITSCAWSPNGQYLVI 156
+ ++++ + LA+ A W + K +S S + P+G YL I
Sbjct: 396 GEVTAISFSENGYFLATAAEDGVRLWDLRKLRNFKSFLSADANSVEFDPSGSYLGI 451
Score = 35.1 bits (77), Expect = 0.074
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 11/140 (7%)
Query: 27 FSPDGSQLVVGAGEKVM-VYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVI 85
F PDG L G + V+ ++D + + + H G V A+++ +G F + +A+ V
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENG-YFLATAAEDGVR 419
Query: 86 IWTSKMEGILKYSHSEAIQCLAYNPVTFHLASCA--------ISDFAFWSMDIKAVQKHK 137
+W + K S + ++P +L A S A W++ IK +
Sbjct: 420 LWDLRKLRNFKSFLSADANSVEFDPSGSYLGIAASDIKVYQTASVKAEWNL-IKTLPDLS 478
Query: 138 VSGRITSCAWSPNGQYLVIG 157
+G+ T + + QY+ +G
Sbjct: 479 GTGKATCVKFGSDAQYVAVG 498
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 41.1 bits (92), Expect = 0.001
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 28 SPDGSQL-VVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVII 86
SPDG + VVG ++ D +G + L+ H A A+ +G FA+G+ D+ I
Sbjct: 286 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRI 345
Query: 87 W-TSKME---GILKYSHSEAIQCLAYNPVTFHLASCAISDFAF---WSMDIKAVQKHKVS 139
W T K+ +LK + A++ + + ++A +DF K Q+
Sbjct: 346 WDTRKLSESVAVLK-GNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFF 404
Query: 140 GRITSCAWSPNGQYLVIGL 158
G I+ ++SP+ + L IG+
Sbjct: 405 GEISGISFSPDTESLFIGV 423
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 41.1 bits (92), Expect = 0.001
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 28 SPDGSQL-VVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVII 86
SPDG + VVG ++ D +G + L+ H A A+ +G FA+G+ D+ I
Sbjct: 280 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRI 339
Query: 87 W-TSKME---GILKYSHSEAIQCLAYNPVTFHLASCAISDFAF---WSMDIKAVQKHKVS 139
W T K+ +LK + A++ + + ++A +DF K Q+
Sbjct: 340 WDTRKLSESVAVLK-GNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFF 398
Query: 140 GRITSCAWSPNGQYLVIGL 158
G I+ ++SP+ + L IG+
Sbjct: 399 GEISGISFSPDTESLFIGV 417
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/89 (21%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 77 SGSADRNVIIWTSKMEGILK-YSHSEAIQCLAYNPV--TFHLASCAISDFAFWSM-DIKA 132
S S D+ V +W + + LK ++H++ + C+ +NP+ + ++ + W++ + +
Sbjct: 535 SSSMDKTVRLWDIETQSCLKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNISNRQV 594
Query: 133 VQKHKVSGRITSCAWSPNGQYLVIGLASG 161
V+ + + +T+ ++P+GQ +G +G
Sbjct: 595 VEWNDLKEMVTAVCYTPDGQAAFVGSING 623
Score = 28.7 bits (61), Expect = 6.4
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 32 SQLVVGAG--EKVMVYDPRDGSLLQLLQAHKGAVHAVAYCG-DGKKFASGSADRNVIIWT 88
SQL++ + + V ++D S L+L AH V V + D F SGS D + IW
Sbjct: 530 SQLLLSSSMDKTVRLWDIETQSCLKLF-AHNDYVTCVQFNPLDEDYFISGSLDAKIRIWN 588
Query: 89 SKMEGILKYSH-SEAIQCLAYNP 110
+++++ E + + Y P
Sbjct: 589 ISNRQVVEWNDLKEMVTAVCYTP 611
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Query: 59 HKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILK-YSHSEAIQCLAYNPVTF-HLA 116
H G + +++ + S S D +V +W E L +SH+ + + +NPV H
Sbjct: 355 HSGDILDISW-SKNNRLLSASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPVDDDHFI 413
Query: 117 SCAISD-FAFWSMD-IKAVQKHKVSGRITSCAWSPNGQYLVIGLASGAVTFRDKVGNEIQ 174
S +I WS + V G +T+ + P+GQ ++IG + F + G+ +Q
Sbjct: 414 SGSIDGKVRIWSASQCQVVDWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYNVSGHCLQ 473
Score = 31.9 bits (69), Expect = 0.69
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 54 QLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWT 88
Q +QAH+GA+ A+ + DG+ AS D + +W+
Sbjct: 245 QEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWS 279
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Query: 59 HKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILK-YSHSEAIQCLAYNPVTF-HLA 116
H G + +++ + S S D +V +W E L +SH+ + + +NPV H
Sbjct: 355 HSGDILDISW-SKNNRLLSASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPVDDDHFI 413
Query: 117 SCAISD-FAFWSMD-IKAVQKHKVSGRITSCAWSPNGQYLVIGLASGAVTFRDKVGNEIQ 174
S +I WS + V G +T+ + P+GQ ++IG + F + G+ +Q
Sbjct: 414 SGSIDGKVRIWSASQCQVVDWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYNVSGHCLQ 473
Score = 31.9 bits (69), Expect = 0.69
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 54 QLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWT 88
Q +QAH+GA+ A+ + DG+ AS D + +W+
Sbjct: 245 QEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWS 279
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 40.3 bits (90), Expect = 0.002
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 16 KIEFSSVHTLCFSPDGSQLVVGAGE--KVMVYDPRDGSLLQLLQAHKGAVHAVAYCG-DG 72
+I ++ L F+ + +V E KV V+D G ++ H+ VHAVA+
Sbjct: 211 RIAGQTLFFLTFNWENRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTP 270
Query: 73 KKFASGSADRNVIIWTSK--MEGILKYSHSEAIQCLAYNPVTFHLASCAISDFAFWSMDI 130
+ SGS DR V++ + LK+S ++ LA++P + H ++ D D
Sbjct: 271 EVLLSGSRDRTVVLKDGRDPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDT 330
Query: 131 KA 132
+A
Sbjct: 331 RA 332
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 37 GAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW 87
G ++ VY+ R G+ L +L+ H+ +AV+Y D + AS S D V +W
Sbjct: 327 GWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALW 377
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 40.3 bits (90), Expect = 0.002
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 11/148 (7%)
Query: 21 SVHTLCFSPDGSQL-VVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGS 79
SV+ + SPDG + V+G + ++ D G ++ L+ H + A+ +G+ A+G+
Sbjct: 279 SVNNISTSPDGKLVAVLGDSPECLLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGN 338
Query: 80 ADRNVIIW----TSKMEGILKYSHSEAIQCLAYNPVTFHLASCAISDFAFWSMDIKA--- 132
D +W S+ +LK + AI+ L + LA +DF D +A
Sbjct: 339 QDTTCRLWDVRNLSQSLKVLK-GNMGAIRALRFTSDGRFLAMAEPADFVH-LFDTEAGYS 396
Query: 133 -VQKHKVSGRITSCAWSPNGQYLVIGLA 159
Q+ + G I ++SP+ + L +G+A
Sbjct: 397 QCQEIDLFGEIAGISFSPDTEALFVGVA 424
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 39.9 bits (89), Expect = 0.003
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 26 CFSPDGSQLVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKK--FASGSADRN 83
C + G GA KV+V+D G + HKG V ++ + D K SGS D
Sbjct: 110 CHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDAT 169
Query: 84 VIIW 87
V +W
Sbjct: 170 VRVW 173
Score = 37.5 bits (83), Expect = 0.014
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 12/146 (8%)
Query: 18 EFSSVHTLCFSPDGSQLV-VGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFA 76
E ++ L SPD L G ++ V+D ++ + H+G V +A G A
Sbjct: 59 ESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLA 118
Query: 77 SGSADRNVIIWTSKMEGILKY--SHSEAIQCLAYNPVTFHLASCAISDFA---FWSMDIK 131
+ ADR V++W Y H + + ++P + + SD A W ++ K
Sbjct: 119 TAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAK 178
Query: 132 AVQK------HKVSGRITSCAWSPNG 151
+K K +TS A S +G
Sbjct: 179 NTEKKCLAIMEKHFSAVTSIALSEDG 204
Score = 37.5 bits (83), Expect = 0.014
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 27 FSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVI 85
FS ++ +G+K V ++ DGS L+ + H +V ++ DG +F S AD +
Sbjct: 549 FSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLK 608
Query: 86 IW-TSKMEGILKY-SHSEAIQCLAYNPVTFHLAS 117
+W + E I Y H + + LA T +A+
Sbjct: 609 LWNVNTSECIATYDQHEDKVWALAVGKKTEMIAT 642
Score = 34.3 bits (75), Expect = 0.13
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 26 CFSPDGSQLVV-GAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKF-ASGSADR 82
C S G+ L+V G+ +K V +++ S + + H G + AVA+ F SGS DR
Sbjct: 410 CVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDR 469
Query: 83 NVIIWTSKMEGILKYSHSEAIQCLAYNPVTFH 114
+ +W+ ++GI + S E I + V H
Sbjct: 470 TLKVWS--LDGISEDS-EEPINLKTRSVVAAH 498
Score = 29.1 bits (62), Expect = 4.9
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Query: 40 EKVMVYDPRDGSLLQLLQAHKGAVHAVAYC---GDGKKFASGSADRNVIIW--TSKMEGI 94
E+V VYD S +L HK V ++ C +GS D+ V +W TSK
Sbjct: 381 EEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIG 440
Query: 95 LKYSHSEAIQCLAY--NPVTFHLASCAISDFAFWSMD 129
+ H+ I +A+ +F ++ WS+D
Sbjct: 441 VGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLD 477
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 39.9 bits (89), Expect = 0.003
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 21 SVHTLCFSPDGSQLVVGAGEKVMV--YDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASG 78
+V + P + GE + V +D + G + + H G VH V Y G+ + SG
Sbjct: 224 NVESASLEPKHGNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSG 283
Query: 79 SADRNVIIW 87
S D V IW
Sbjct: 284 SEDGTVRIW 292
Score = 34.3 bits (75), Expect = 0.13
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 28 SPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVII 86
+PDG L+ + + M+ + G + + HKGAV + + + + AS SAD I
Sbjct: 23 TPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNAIRAASASADFTAKI 82
Query: 87 WTSKM-EGILKYSHSEAIQCLAYNPVTFHL 115
W + + + + H ++ A++ T L
Sbjct: 83 WNALTGDELHSFEHKHIVRACAFSEDTHRL 112
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 21 SVHTLCFSPDGSQLVVGAGEKVMV--YDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASG 78
++ + P V GE + V +D G + + H G VH V + G+ +ASG
Sbjct: 229 NIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASG 288
Query: 79 SADRNVIIW 87
S D + IW
Sbjct: 289 SEDGTIRIW 297
Score = 38.3 bits (85), Expect = 0.008
Identities = 36/170 (21%), Positives = 71/170 (41%), Gaps = 8/170 (4%)
Query: 28 SPDGSQLVVGAGE-KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVII 86
+PDG L+ + + + M+ + G + + HKGAV + + + AS SAD + +
Sbjct: 28 TPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKL 87
Query: 87 WTSKMEGIL-KYSHSEAIQCLAYNPVTFHLASCAISD----FAFWSMDIKAVQKHKVSGR 141
W + +L + H ++ A++ T +L + F +D + K G
Sbjct: 88 WDALTGDVLHSFEHKHIVRACAFSQDTKYLITGGFEKILRVFDLNRLDAPPTEIDKSPGS 147
Query: 142 ITSCAWSPNGQYLVIGLAS-GAVTFRD-KVGNEIQRILREAAVWAVAFSK 189
I + W Q ++ G V D + G +Q + ++ V + S+
Sbjct: 148 IRTLTWLHGDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQ 197
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 39.1 bits (87), Expect = 0.005
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 22 VHTLCFSPDGSQLVV----GAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFAS 77
V +CF+ + ++ G + + + D L+ + H V +++ C G+ F S
Sbjct: 78 VDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFIS 137
Query: 78 GSADRNVIIWTSKME 92
GS DR V++W ++E
Sbjct: 138 GSLDRTVLLWDQRVE 152
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 39.1 bits (87), Expect = 0.005
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 22 VHTLCFSPDGSQLVV----GAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFAS 77
V +CF+ + ++ G + + + D L+ + H V +++ C G+ F S
Sbjct: 75 VDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFIS 134
Query: 78 GSADRNVIIWTSKME 92
GS DR V++W ++E
Sbjct: 135 GSLDRTVLLWDQRVE 149
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 39.1 bits (87), Expect = 0.005
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Query: 56 LQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTS-KMEGILKY-SHSEAIQCLAYNPVTF 113
L+ HK + + + D ++ ASG D + +W + +L++ H+ A++ +A++P F
Sbjct: 288 LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHF 347
Query: 114 HL----ASCAISDFAFWSMDIKA-VQKHKVSGRITSCAWSPNGQYLV 155
L A FW+ + + ++ + WS N LV
Sbjct: 348 GLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSKNVNELV 394
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 39.1 bits (87), Expect = 0.005
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 56 LQAHKGAVHAVAYCGDGKKFASGSADRNVIIW---TSKMEGILKYSHSEAIQ--CLAYNP 110
L H+G++ + + DG K S S DR+ IW + ++ G + + HS + C++ +
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCISDSL 290
Query: 111 VTFHLASCAISDFAFWSMDIKAVQKHKVSGRITSCAWSPNGQYLV 155
+ C + ++ +++H + I C + PN LV
Sbjct: 291 IVTAGEDCTCRVWGVDGTQLEVIKEH-IGRGIWRCLYDPNSSLLV 334
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 39.1 bits (87), Expect = 0.005
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 56 LQAHKGAVHAVAYCGDGKKFASGSADRNVIIW---TSKMEGILKYSHSEAIQ--CLAYNP 110
L H+G++ + + DG K S S DR+ IW + ++ G + + HS + C++ +
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCISDSL 290
Query: 111 VTFHLASCAISDFAFWSMDIKAVQKHKVSGRITSCAWSPNGQYLV 155
+ C + ++ +++H + I C + PN LV
Sbjct: 291 IVTAGEDCTCRVWGVDGTQLEVIKEH-IGRGIWRCLYDPNSSLLV 334
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 39.1 bits (87), Expect = 0.005
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 92 EGILKYSHSEAIQCLAYNPVTFHLAS-CAISDFAFWSMDIKAVQK----HKVSGRITSCA 146
E I +Y I+C+A+N LA+ CA W + + + K + S ITS +
Sbjct: 15 EVIEEYLEHGVIKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVS 74
Query: 147 WSPNGQYLVIGLASGAVTFRD-KVGNEIQR-ILREAAVWA 184
WS G L++ A ++T D G +I R IL++ + A
Sbjct: 75 WSKYGHRLLVSAADKSLTLWDVSTGEKIARTILQQTPLQA 114
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 44 VYDPRDGSLLQLLQAH--KGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILK 96
+ DP G ++++ + G + VA+ G A+G AD +IW + GI K
Sbjct: 5 IIDPLQGDFPEVIEEYLEHGVIKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAK 59
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/126 (21%), Positives = 56/126 (44%), Gaps = 5/126 (3%)
Query: 53 LQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILK-YSHSEAIQCLAYNPV 111
L + H G + +++ G +S S D V +W + L+ ++H+ + C+A+NPV
Sbjct: 315 LHEFKGHIGEILDLSWSEKGYLLSS-SVDETVRLWRVGCDECLRTFTHNNFVTCVAFNPV 373
Query: 112 --TFHLASCAISDFAFWSMD-IKAVQKHKVSGRITSCAWSPNGQYLVIGLASGAVTFRDK 168
+ ++ W + + V + +T+ + P+ + VIG +G F
Sbjct: 374 DDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAKGAVIGSMTGNCRFYHI 433
Query: 169 VGNEIQ 174
N++Q
Sbjct: 434 FENQLQ 439
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 54 QLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWT 88
Q AH G++ A+ + DGK AS D V +W+
Sbjct: 212 QEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWS 246
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/126 (21%), Positives = 56/126 (44%), Gaps = 5/126 (3%)
Query: 53 LQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILK-YSHSEAIQCLAYNPV 111
L + H G + +++ G +S S D V +W + L+ ++H+ + C+A+NPV
Sbjct: 315 LHEFKGHIGEILDLSWSEKGYLLSS-SVDETVRLWRVGCDECLRTFTHNNFVTCVAFNPV 373
Query: 112 --TFHLASCAISDFAFWSMD-IKAVQKHKVSGRITSCAWSPNGQYLVIGLASGAVTFRDK 168
+ ++ W + + V + +T+ + P+ + VIG +G F
Sbjct: 374 DDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAKGAVIGSMTGNCRFYHI 433
Query: 169 VGNEIQ 174
N++Q
Sbjct: 434 FENQLQ 439
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 54 QLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWT 88
Q AH G++ A+ + DGK AS D V +W+
Sbjct: 212 QEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWS 246
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 39.1 bits (87), Expect = 0.005
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 21 SVHTLCFSPDGSQLVVGAGEK--VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASG 78
++ + P + V GE V V+D G + + H G VH V + G +ASG
Sbjct: 229 NIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASG 288
Query: 79 SADRNVIIW 87
S D + IW
Sbjct: 289 SEDGTIRIW 297
Score = 37.5 bits (83), Expect = 0.014
Identities = 36/170 (21%), Positives = 70/170 (41%), Gaps = 8/170 (4%)
Query: 28 SPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVII 86
+PDG L+ + + M+ + G + + HKGAV + + + AS SAD + +
Sbjct: 28 TPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKL 87
Query: 87 WTSKMEGIL-KYSHSEAIQCLAYNPVTFHLASCAISD----FAFWSMDIKAVQKHKVSGR 141
W + +L + H ++ A++ T L + F +D + K G
Sbjct: 88 WDALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGS 147
Query: 142 ITSCAWSPNGQYLVIGLAS-GAVTFRD-KVGNEIQRILREAAVWAVAFSK 189
I + W + Q ++ G V D + G +Q + ++ V + S+
Sbjct: 148 IRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQ 197
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 39.1 bits (87), Expect = 0.005
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 21 SVHTLCFSPDGSQLVVGAGEK--VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASG 78
++ + P + V GE V V+D G + + H G VH V + G +ASG
Sbjct: 229 NIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASG 288
Query: 79 SADRNVIIW 87
S D + IW
Sbjct: 289 SEDGTIRIW 297
Score = 37.5 bits (83), Expect = 0.014
Identities = 36/170 (21%), Positives = 70/170 (41%), Gaps = 8/170 (4%)
Query: 28 SPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVII 86
+PDG L+ + + M+ + G + + HKGAV + + + AS SAD + +
Sbjct: 28 TPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKL 87
Query: 87 WTSKMEGIL-KYSHSEAIQCLAYNPVTFHLASCAISD----FAFWSMDIKAVQKHKVSGR 141
W + +L + H ++ A++ T L + F +D + K G
Sbjct: 88 WDALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGS 147
Query: 142 ITSCAWSPNGQYLVIGLAS-GAVTFRD-KVGNEIQRILREAAVWAVAFSK 189
I + W + Q ++ G V D + G +Q + ++ V + S+
Sbjct: 148 IRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQ 197
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 20 SSVHTLCFSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASG 78
+ V L +SPD S L G+ + V +++ R G +L+ H V V + G AS
Sbjct: 119 ADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQ 178
Query: 79 SADRNVIIWTSKMEGI 94
S D+ VIIW + G+
Sbjct: 179 SDDKTVIIWRTSDWGM 194
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 16 KIEFSSVHTLCFSPDGSQLVVGAGEKVMV------YDPRDGSLLQLLQAHKGAVHAVAYC 69
K E + ++ P+G + G G+ V D ++ LL L+ H G+V+ V +
Sbjct: 10 KHEGLQIFSIDVQPNGERFATGGGDHKSVDKDLQNIDTKE-RLLATLRDHFGSVNCVRWA 68
Query: 70 GDGKKFASGSADRNVIIWTSKM-EGILKYSHSEA 102
+ + ASGS D+ + I K G ++ EA
Sbjct: 69 KNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEA 102
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 29 PDGSQLVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWT 88
P G+GE D + + L+ H V + + D ASGS D V IW
Sbjct: 90 PGSGTTEFGSGEAP---DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWN 146
Query: 89 SK--MEGILKYSHSEAIQCLAYNPVTFHLAS 117
+ M + H ++ + ++P+ +AS
Sbjct: 147 MRTGMCTTVLRGHLSLVKGVTWDPIGSFIAS 177
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 38.3 bits (85), Expect = 0.008
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 56 LQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILKYSHS 100
L+ HKG V+ V++ +G SGS DR V++W ++ + HS
Sbjct: 55 LEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHS 99
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 25 LCFSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRN 83
L S DG L G ++ V ++D R +Q H+ V + + + SGS DR
Sbjct: 228 LAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRT 287
Query: 84 VIIWTSKMEGILKYSHSEAIQCLA 107
V +W + + + +H + LA
Sbjct: 288 VKVWNVEDKAFITENHGHQGEILA 311
Score = 34.3 bits (75), Expect = 0.13
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 65 AVAYCGDGKKFASGSADRNVIIWTSK-MEGILKY-SHSEAIQCLAYNPVTFHLASCAIS- 121
A+A DG+ A+G DR+V IW + E + + H + CL + T L S +
Sbjct: 227 ALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDR 286
Query: 122 DFAFWSMDIKA--VQKHKVSGRI 142
W+++ KA + H G I
Sbjct: 287 TVKVWNVEDKAFITENHGHQGEI 309
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 37.9 bits (84), Expect = 0.010
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 22 VHTLCFSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSA 80
V ++ F P G+ ++ + ++D G L L H G V +A S
Sbjct: 173 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGD 232
Query: 81 DRNVIIWTSKMEGILK--YSHSEAIQCLAYNP 110
D+ V W + +++ + H + CLA +P
Sbjct: 233 DKQVKCWDLEQNKVIRSYHGHLHGVYCLALHP 264
Score = 35.9 bits (79), Expect = 0.042
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 54 QLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILK 96
++LQ H G V +VA+ + F +GSADR + IW G+LK
Sbjct: 164 RVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIW-DVATGVLK 205
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 20 SSVHTLCFSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASG 78
S V ++ P Q++ G+ + + +D R G + + HK V A+A F S
Sbjct: 296 SDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSA 355
Query: 79 SAD 81
SAD
Sbjct: 356 SAD 358
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 37.5 bits (83), Expect = 0.014
Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 7/154 (4%)
Query: 27 FSPDGSQ-LVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVI 85
F+ DG+ L G + +++P G L++ ++H V V D KF S DR V
Sbjct: 26 FNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVY 85
Query: 86 IW-TSKMEGILKY-SHSEAIQCLAYNPVTFHLASCAIS-DFAFWSMDIKAVQKHKVSGRI 142
W S I K+ H + + +N + + S W +V+ ++
Sbjct: 86 YWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTF 145
Query: 143 TSCAWSP--NGQYLVIGLASGAV-TFRDKVGNEI 173
S ++ G G V TF ++G E+
Sbjct: 146 LDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGREM 179
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 55 LLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGIL 95
+L+ H+GAV A + GDG + DR + +W + GIL
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLW-NPHRGIL 52
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 37.5 bits (83), Expect = 0.014
Identities = 25/126 (19%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 21 SVHTLCFSPDGSQLVVGAGE-KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGS 79
S++ + ++P G +L+ G+ + +++ + + +LQAH + ++ + + SG
Sbjct: 125 SINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGD 184
Query: 80 ADRNVIIWTSKMEGIL--KYSHSEAIQCLAYNPVTFHLASCA-ISDFAFWSMDIKAVQKH 136
+ W + M + K +H E+I+ L++ SC+ + W K V +
Sbjct: 185 DGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWDF-TKCVDES 243
Query: 137 KVSGRI 142
++G I
Sbjct: 244 SLTGYI 249
Score = 33.5 bits (73), Expect = 0.23
Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 22 VHTLCFSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSA 80
V ++ + P S LV G ++ V ++D R G L L HK V +V + +G + S
Sbjct: 271 VKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASK 330
Query: 81 DRNVIIWTSK-MEGILKY-SHSEAIQCLAYNPV--TFHLASCAISDFAFWSMDIKAVQ-- 134
D+ + ++ + M+ + + H++ + LA++P + ++ + W + + Q
Sbjct: 331 DQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIE 390
Query: 135 -KHKVSGRITSCAWSPNGQYLVIG 157
+ + AW P G L G
Sbjct: 391 IPNAHDNSVWDLAWHPIGYLLCSG 414
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to
gene PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 37.5 bits (83), Expect = 0.014
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 56 LQAHKGAVHAVAYCGDGKKFASGSADRNVIIW 87
L HKG V+ V++ DG SGS DR VI+W
Sbjct: 51 LDKHKGCVNTVSFNADGDILLSGSDDRQVILW 82
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 27 FSPDGSQLVVGAG-EKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVI 85
F P +V G+ ++ ++ +DG LL+ ++A + V+ + S D ++
Sbjct: 318 FGPKCEYVVSGSDCGRIFIWRKKDGELLRAMEADRHVVNCIESHPHMPLMCSSGIDTDIK 377
Query: 86 IWT 88
IWT
Sbjct: 378 IWT 380
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 37.5 bits (83), Expect = 0.014
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 27 FSPDGSQLVVGAGE-KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKF-ASGSADRNV 84
FSP+G L G + + ++D R LL ++ AH V V Y + F A+ S D NV
Sbjct: 180 FSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNV 239
Query: 85 IIWTSKMEGILK 96
IW+ + ++K
Sbjct: 240 NIWSGRDFSLVK 251
Score = 32.3 bits (70), Expect = 0.52
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 44 VYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILKY--SHSE 101
V+D R + + Q H V +V + +G ASG D IW +M +L +H
Sbjct: 156 VWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVN 215
Query: 102 AIQCLAYNPVTFHLASCAISD 122
+ + Y P + + A D
Sbjct: 216 LVSQVKYEPQERYFLATASHD 236
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 37.5 bits (83), Expect = 0.014
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 42 VMVYDP--RDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILK--Y 97
V ++DP R L L+ H G V A++ D K SGS D +VI+W + +L+
Sbjct: 879 VKIWDPSLRGSELRATLKGHTGTVRAIS--SDRGKIVSGSDDLSVIVWDKQTTQLLEELK 936
Query: 98 SHSEAIQCL 106
H + C+
Sbjct: 937 GHDSQVSCV 945
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 34 LVVGAGE-KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKME 92
L+ G+ + V+ GS +L H G V +V Y K +GSAD + W +
Sbjct: 1035 LITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLLRFWENDEG 1094
Query: 93 GI 94
GI
Sbjct: 1095 GI 1096
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 37.1 bits (82), Expect = 0.018
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 32 SQLVVGAGEK--VMVYDPRDGSLLQLLQ---AHKGAVHAVAYCGDGKKFASGSADRNVII 86
+Q +V GE + ++D G LL+ HK A+ ++ D F +GS D+ +
Sbjct: 187 NQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKL 246
Query: 87 WTSKMEGILK-YSHSEAIQCLAYNPVTFHL 115
W + ++K Y+ + +A +P+ H+
Sbjct: 247 WDMRTLTLIKTYTTVVPVNAVAMSPLLNHV 276
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 56 LQAHKGAVHAVAYCGDGKKFASGSAD 81
++ H G ++A+A+ DGK F+SG D
Sbjct: 313 VKGHFGPINALAFSPDGKSFSSGGED 338
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 49 DGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSK 90
+G L + H GAV D + +GSAD+ +W K
Sbjct: 68 NGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVK 109
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 37.1 bits (82), Expect = 0.018
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Query: 25 LCFSPDGSQLVV-GAGEKVMVYDPR----DGSLLQLLQAHKGAVHA----VAYCGDGKKF 75
+ SPDGS L+ G K+ V+D R +++ + H+ ++ DG K
Sbjct: 228 MSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKV 287
Query: 76 ASGSADRNVIIW-TSKMEGILKY-SHSEAIQCLAYNPVTFHLASCA 119
+GS+DR V IW T+ I K H+ ++ ++P + SC+
Sbjct: 288 TAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCS 333
Score = 36.7 bits (81), Expect = 0.024
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 20 SSVHTLCFSPDGSQLVVGAGEK-VMVYDPR-DGSLLQLLQAHKGAVHAVAYCGDGKKFAS 77
S+V+T+ F+P G+ + G+ ++ + ++ D +L+ HK A+ + + DG + S
Sbjct: 54 SAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVS 113
Query: 78 GSADRNVIIW 87
S D+ V W
Sbjct: 114 ASPDKTVRAW 123
Score = 35.5 bits (78), Expect = 0.056
Identities = 35/163 (21%), Positives = 65/163 (39%), Gaps = 16/163 (9%)
Query: 20 SSVHTLCFSPDGSQLVVGAGEK--VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFAS 77
S V++ C + G L++ + ++D R +Q K + AV++ K +
Sbjct: 139 SFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDAADKIFT 197
Query: 78 GSADRNVIIWT-SKMEGILKYS-HSEAIQCLAYNPVTFHLASCAISD-FAFWSMDIKAVQ 134
G D +V +W K E + H + I ++ +P +L + + + W M A Q
Sbjct: 198 GGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQ 257
Query: 135 ----------KHKVSGRITSCAWSPNGQYLVIGLASGAVTFRD 167
+H + C+WSP+G + G + V D
Sbjct: 258 NRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWD 300
Score = 34.3 bits (75), Expect = 0.13
Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 14/147 (9%)
Query: 53 LQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW----TSKMEGILKYSHSEAIQCLAY 108
+ LL H AV+ + + G ASGS DR + +W K +LK H AI L +
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLK-GHKNAILDLHW 104
Query: 109 NPVTFHLASCA-ISDFAFWSMD----IKAVQKHKVSGRITSCAWSPNGQYLVI-GLASGA 162
+ S + W ++ IK + +H S + SC + G L+I G G
Sbjct: 105 TSDGSQIVSASPDKTVRAWDVETGKQIKKMAEH--SSFVNSCCPTRRGPPLIISGSDDGT 162
Query: 163 VTFRD-KVGNEIQRILREAAVWAVAFS 188
D + IQ + + AV+FS
Sbjct: 163 AKLWDMRQRGAIQTFPDKYQITAVSFS 189
Score = 33.5 bits (73), Expect = 0.23
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 10 KIHEADKIEFSSVHTLC-FSPDGSQLVVGAGEKVM-VYDPRDGSLLQLLQAHKGAVHAVA 67
KI E + F C +SPDG+++ G+ ++++ ++D + L H G+V+
Sbjct: 262 KIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECV 321
Query: 68 YCGDGKKFASGSADRNVII 86
+ S S+D+N+ +
Sbjct: 322 FHPTEPIIGSCSSDKNIYL 340
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 15 DKIEFSSVHTLCFSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGK 73
DK + ++V FS ++ G + V V+D R G L+ H+ + ++ DG
Sbjct: 179 DKYQITAVS---FSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGS 235
Query: 74 KFASGSADRNVIIW 87
+ D + +W
Sbjct: 236 YLLTNGMDNKLCVW 249
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 36.7 bits (81), Expect = 0.024
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 54 QLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILKYS---HSEAIQCLA 107
+++Q H G V +VA+ + F +GSADR + IW G+LK + H E ++ LA
Sbjct: 170 RVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIW-DVATGVLKLTLTGHIEQVRGLA 225
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 29 PDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSAD 81
P Q+V G+ + + +D R G + L HK +V A+ FAS SAD
Sbjct: 312 PTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASAD 365
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 36.7 bits (81), Expect = 0.024
Identities = 36/175 (20%), Positives = 76/175 (43%), Gaps = 7/175 (4%)
Query: 48 RDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILKYSHSEAIQCLA 107
R+G L++ AH+ + AV G+ SGS+D ++ +W K H++ ++ LA
Sbjct: 139 RNGQLVESWDAHQSPIQAVIRLPSGE-LVSGSSDASLKLWKGKTSLQTLSGHTDTVRGLA 197
Query: 108 YNPVTFHLASCAISDFAFWSMDIKAVQKHKVSGRITSCAWS--PNGQYLVIGLASGAVTF 165
P L++ W++ + + ++ G TS +S + L++ +
Sbjct: 198 VMPDLGFLSASHDGSIRLWALSGEVLL--EMVGH-TSLVYSVDAHSSGLIVSASEDRHAK 254
Query: 166 RDKVGNEIQRILREAAVWAVAFSKMTLLVTDWNE-TLSFYTIQGMAAVSIMLLDS 219
K G +Q + +W F + +VT ++ + +T++ A M +D+
Sbjct: 255 IWKDGVCVQSLEHPGCIWDAKFLETGDIVTACSDGVVRVWTVRHDAIADQMEIDA 309
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 36.7 bits (81), Expect = 0.024
Identities = 36/175 (20%), Positives = 76/175 (43%), Gaps = 7/175 (4%)
Query: 48 RDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILKYSHSEAIQCLA 107
R+G L++ AH+ + AV G+ SGS+D ++ +W K H++ ++ LA
Sbjct: 139 RNGQLVESWDAHQSPIQAVIRLPSGE-LVSGSSDASLKLWKGKTSLQTLSGHTDTVRGLA 197
Query: 108 YNPVTFHLASCAISDFAFWSMDIKAVQKHKVSGRITSCAWS--PNGQYLVIGLASGAVTF 165
P L++ W++ + + ++ G TS +S + L++ +
Sbjct: 198 VMPDLGFLSASHDGSIRLWALSGEVLL--EMVGH-TSLVYSVDAHSSGLIVSASEDRHAK 254
Query: 166 RDKVGNEIQRILREAAVWAVAFSKMTLLVTDWNE-TLSFYTIQGMAAVSIMLLDS 219
K G +Q + +W F + +VT ++ + +T++ A M +D+
Sbjct: 255 IWKDGVCVQSLEHPGCIWDAKFLETGDIVTACSDGVVRVWTVRHDAIADQMEIDA 309
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 36.7 bits (81), Expect = 0.024
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Query: 20 SSVHTLCFSPDGSQLVVGAGEKVMVYDPRDGSLLQLL--QAHKGAVHAVAYCGDGKKFAS 77
S V+ L +PD L + ++D S ++ +H V AV + D K S
Sbjct: 36 SHVNRLEITPDKHYLAAACNPHIRLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYS 95
Query: 78 GSADRNVIIWTSKMEGILK-YSHSEAIQCLAYNPVTFHLAS 117
GS D V IW + G K Y A+ + +P L S
Sbjct: 96 GSEDGTVKIWDLRAPGCQKEYESVAAVNTVVLHPNQTELIS 136
Score = 29.1 bits (62), Expect = 4.9
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 4/97 (4%)
Query: 53 LQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWT---SKMEGILKYSHSEAIQCLAYN 109
L LQAH G + K A+ S+D+ V IW K+E +L C+
Sbjct: 204 LHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSV 263
Query: 110 PVTFHLASCAISDFAFWSMDI-KAVQKHKVSGRITSC 145
F + + + WSM K V+ ++ + T C
Sbjct: 264 DGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVC 300
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 36.3 bits (80), Expect = 0.032
Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 8/122 (6%)
Query: 42 VMVYDPR-DGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTS-KMEGILKYS- 98
++ +D R + L HK V + + D ++ ASG D +++W + + ILK +
Sbjct: 279 ILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTE 338
Query: 99 HSEAIQCLAYNPVTFHL----ASCAISDFAFW-SMDIKAVQKHKVSGRITSCAWSPNGQY 153
H+ A++ + ++P L A FW + + + ++ + AWS N
Sbjct: 339 HTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQVCNLAWSKNVNE 398
Query: 154 LV 155
+V
Sbjct: 399 IV 400
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 36.3 bits (80), Expect = 0.032
Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 22 VHTLCFSPDGSQLVVGAGEKVM-VYDPRDGSLLQLLQ---AHKGAVHAVAYCGDGKKFAS 77
++ + P +V G +KV+ ++D G LL+ HK + ++ D F +
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLT 210
Query: 78 GSADRNVIIWTSKMEGILK-YSHSEAIQCLAYNPVTFHLASCA 119
GS D+ +W + +LK Y+ + ++ +P+ H+ + A
Sbjct: 211 GSLDKTAKLWDMRTLTLLKTYTTVVPVNAVSLSPLLNHVCTNA 253
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 49 DGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSK 90
+G L + H GAV D + +GSAD+ +W K
Sbjct: 41 NGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVK 82
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 36.3 bits (80), Expect = 0.032
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 52 LLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW 87
+ Q +QAH+GAV + + D ASG ADR + +W
Sbjct: 396 MCQEIQAHEGAVWTIKFSQDAHYLASGGADRVIHVW 431
Score = 30.7 bits (66), Expect = 1.6
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 20/159 (12%)
Query: 32 SQLVVGAG--EKVMVYDPRDGSLLQLLQAHKGAVHAVAYCG-DGKKFASGSADRNVIIWT 88
SQL++ + + V ++D + L+L AH V + + D F SGS D + IW+
Sbjct: 517 SQLLLSSSMDKTVRLWDIETKTCLKLF-AHNDYVTCIQFSPVDENYFLSGSLDAKIRIWS 575
Query: 89 SKMEGILKYSH-SEAIQCLAYNP------VTFHLASCAISDFAFWSM------DIKAVQK 135
+ ++++S E + Y P + H C D + D+++ +K
Sbjct: 576 IQDRHVVEWSDLHEMVTAACYTPDGQGALIGSHKGICRAYDTEDCKLSQTNQIDVQSNKK 635
Query: 136 HKVSGRITSCAWSP-NGQYLVIGLASGAVTFRDKVGNEI 173
+ +ITS +SP N +++ A + D G+E+
Sbjct: 636 SQAKRKITSFQFSPVNPSEVLVTSADSRIRILD--GSEV 672
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 36.3 bits (80), Expect = 0.032
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 15/93 (16%)
Query: 99 HSEAIQCLAYNPVTFH-------LASCAISDFA-FW-------SMDIKAVQKHKVSGRIT 143
H++ + +A+NPV+ H LASC+ + W S K V + + +
Sbjct: 19 HTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVR 78
Query: 144 SCAWSPNGQYLVIGLASGAVTFRDKVGNEIQRI 176
SCAWSP+GQ L G G+E + I
Sbjct: 79 SCAWSPSGQLLATASFDGTTGIWKNYGSEFECI 111
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 36.3 bits (80), Expect = 0.032
Identities = 31/143 (21%), Positives = 57/143 (39%), Gaps = 13/143 (9%)
Query: 37 GAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEG--- 93
G +++D G +L L H V ++ + GD + S+D+ V IW +G
Sbjct: 241 GIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYT 300
Query: 94 ---ILKYSHSEAIQCLAYNPVTFHLASCAI-SDFAFWSMD-----IKAVQKHKVSGRITS 144
LK HS ++ + + + S ++ S + F+ + + + T+
Sbjct: 301 SRHTLK-DHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTA 359
Query: 145 CAWSPNGQYLVIGLASGAVTFRD 167
A+ P+G L G A V D
Sbjct: 360 AAFHPDGLILGTGTAQSIVKIWD 382
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 35.9 bits (79), Expect = 0.042
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 54 QLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW---TSKMEGILKYSHSEAIQCLAYNP 110
Q L+ H+G V+A+A+ +G SGS D + IW + K+ + H+ I C + P
Sbjct: 44 QELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVP 103
Query: 111 VT 112
T
Sbjct: 104 ET 105
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 35.9 bits (79), Expect = 0.042
Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 7 WVNKIHEADKIEFSSVHTLCFSPDGSQLVVGA-GEKVMVYDPRDGSLLQLLQAHKGAVHA 65
W E + L + +G+ LV G + +++ G LL+ H +V
Sbjct: 66 WTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTC 125
Query: 66 VAYCGDGKKFASGSADRNVIIWT 88
+ + GD SGS D ++ +W+
Sbjct: 126 LVFSGDDSLLVSGSQDGSIRVWS 148
Score = 32.3 bits (70), Expect = 0.52
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 58 AHKG-AVHAVAYCGDGKKFASGSADRNVIIWTSK 90
+ KG A+ +AYC DG SGS D V +W K
Sbjct: 260 SEKGKAITCLAYCADGNLLISGSEDGVVCVWDPK 293
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 35.9 bits (79), Expect = 0.042
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 8 VNKIHEADKIEFSSVHTLCFSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAV 66
+ K +E ++ +H L +S G + G+G+ + + +DGSLL + HK V +
Sbjct: 575 LRKWYEPKDWRYTGIHALAYSEYG-HVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTL 633
Query: 67 AYCGDGKKFASGSADRNVIIWTSKMEGIL 95
+G + SGS D V +W+ +L
Sbjct: 634 VVV-NGVLY-SGSWDGTVRLWSLSDNSLL 660
>At5g60900.1 68418.m07640 lectin protein kinase family protein
contains Pfam domains, PF01453: Lectin (probable mannose
binding) and PF00069: Protein kinase domain
Length = 748
Score = 35.5 bits (78), Expect = 0.056
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 3 TLPKWVNKIHEADKI-EFSSVHTLC-FSPDGSQLVVGAGEKVMVYDPRDGSLLQLLQAHK 60
TL W +KI + + +V+T P+GS++ + A +++ DPR L + L
Sbjct: 71 TLSIWFDKISDKTIVWHAQAVNTTTGLVPNGSKVTLTADGGLVIADPRGQELWRALSG-- 128
Query: 61 GAVHAVAYCGDGK--KFASGSADRNVIIWTS 89
G+V + DG F GS D + ++W+S
Sbjct: 129 GSVSRGRFTDDGNFVLFRDGSEDSDEVLWSS 159
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 35.5 bits (78), Expect = 0.056
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 17 IEFSSVHTLCFSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKF 75
+E S CF+ G L G+ +K + ++D + L+ H G V ++ C D K
Sbjct: 254 LEGHSGEVTCFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLL-CWD-KCL 311
Query: 76 ASGSADRNVIIWTSKMEGILK 96
S S D + +W GILK
Sbjct: 312 ISSSLDGTIKVWAYSENGILK 332
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 35.5 bits (78), Expect = 0.056
Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Query: 9 NKIHEADKIEFSSVHTLCFSPDGSQLVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAY 68
+K H D++ F+ H + GE + D +L+ + HK V ++
Sbjct: 64 HKKHGTDRVCFTH-HPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCM 122
Query: 69 CGDGKKFASGSADRNVIIWTSKMEGILKYSHSEAIQCLAYN 109
F SGS DR+V +W ++ H +AY+
Sbjct: 123 SPINDSFMSGSLDRSVRLWDLRVNACQGILHLRGRPAVAYD 163
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 35.5 bits (78), Expect = 0.056
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 22 VHTLCFSPDGSQLVVGAGE-KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSA 80
V +LC+ PDG + VG + + ++D +G LL+ L+ H AV + + DG+ S
Sbjct: 67 VTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPHDVAVVCLNWEEDGQSNTDESG 126
Query: 81 DRNV 84
+ +V
Sbjct: 127 NFSV 130
Score = 32.3 bits (70), Expect = 0.52
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 142 ITSCAWSPNGQYLVIGLASGAVTFRDKVGNEIQRILREAAVWAVAFS 188
+TS W P+G+ + +GL G ++ D ++ R L+ V V +
Sbjct: 67 VTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPHDVAVVCLN 113
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 35.5 bits (78), Expect = 0.056
Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 22 VHTLCFSPDGSQLVVGAGEKVM-VYDPRDGSLLQLLQ---AHKGAVHAVAYCGDGKKFAS 77
++ + P +V G +KV+ ++D G LL+ HK + ++ D F +
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLT 210
Query: 78 GSADRNVIIWTSKMEGILK-YSHSEAIQCLAYNPVTFHL 115
GS D+ +W + +LK Y+ + ++ +P+ H+
Sbjct: 211 GSLDKTAKLWDMRTLTLLKTYTTVVPVNAVSLSPLLNHV 249
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 56 LQAHKGAVHAVAYCGDGKKFASGSAD 81
++ H G ++A+A+ DGK F+SG D
Sbjct: 286 VKGHFGPINALAFNPDGKSFSSGGED 311
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 49 DGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSK 90
+G L + H GAV D + +GSAD+ +W K
Sbjct: 41 NGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVK 82
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 35.5 bits (78), Expect = 0.056
Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 22 VHTLCFSPDGSQLVVGAGEKVM-VYDPRDGSLLQLLQ---AHKGAVHAVAYCGDGKKFAS 77
++ + P +V G +KV+ ++D G LL+ HK + ++ D F +
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLT 210
Query: 78 GSADRNVIIWTSKMEGILK-YSHSEAIQCLAYNPVTFHL 115
GS D+ +W + +LK Y+ + ++ +P+ H+
Sbjct: 211 GSLDKTAKLWDMRTLTLLKTYTTVVPVNAVSLSPLLNHV 249
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 56 LQAHKGAVHAVAYCGDGKKFASGSAD 81
++ H G ++A+A+ DGK F+SG D
Sbjct: 286 VKGHFGPINALAFNPDGKSFSSGGED 311
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 49 DGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSK 90
+G L + H GAV D + +GSAD+ +W K
Sbjct: 41 NGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVK 82
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 35.5 bits (78), Expect = 0.056
Identities = 21/92 (22%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 21 SVHTLCFSPDGSQLV-VGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGS 79
+++++ FS DG+ L VG + ++D L+ ++++ GA+ A+ DGK +G
Sbjct: 305 AINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGG 364
Query: 80 ADRNVIIWTSKMEGILKY--SHSEAIQCLAYN 109
D V +W+ + ++ + H+ + +A++
Sbjct: 365 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFD 396
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 35.1 bits (77), Expect = 0.074
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 20 SSVHTLCFSPDGSQLVVGAGE-KVMVYDPR-DGSLLQLLQAHKGAVHAVAYCGDGKK-FA 76
SSV + SP + +G + K+ V++ + D ++ A +GAV A+++ DG+ A
Sbjct: 182 SSVTSCVSSPALDVVAIGCADGKIHVHNIKLDEEIVTFEHASRGAVTALSFSTDGRPLLA 241
Query: 77 SGSADRNVIIWT---SKMEGILKYSHSEAI---QCLAYNPVTFHLASCAISDFAFWSMD 129
SG + + IW +++ +++ +H +I LA PV +++ A + W D
Sbjct: 242 SGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVL--MSASADNSLKMWIFD 298
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 35.1 bits (77), Expect = 0.074
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 49 DGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW 87
DG ++Q ++ HK V VA D A+GS D V++W
Sbjct: 1035 DGRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVW 1073
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 34.7 bits (76), Expect = 0.098
Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 13/145 (8%)
Query: 34 LVVGAGEKVMVYDPRDGSLLQL--LQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTS-- 89
L + V ++D GS +L + KG V ++ + DG+ A G + V +W S
Sbjct: 154 LAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSAS 213
Query: 90 -KMEGILKYSHSEAIQCLAYNPVTFHLASCAISDFAFWSMDIK----AVQKHK-VSGRIT 143
+ LK H + LA+N H+ + D + D++ V+ ++ + +
Sbjct: 214 NRQLRTLKGGHQSRVGSLAWNN---HILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVC 270
Query: 144 SCAWSPNGQYLVIGLASGAVTFRDK 168
WS +GQ L G V D+
Sbjct: 271 GLKWSGSGQQLASGGNDNVVHIWDR 295
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 140 GRITSCAWSPNGQYLVIGLASGAVTFRDKVGNEIQRILR 178
G +TS W+P+G+++ +GL + V D N R L+
Sbjct: 183 GPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLK 221
Score = 29.1 bits (62), Expect = 4.9
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 13/117 (11%)
Query: 52 LLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW-------TSKMEGILKY-SHSEAI 103
+++ + H V + + G G++ ASG D V IW S + + + H+ A+
Sbjct: 258 IVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAV 317
Query: 104 QCLAYNPVTFHLASC----AISDFAFWSMDIKAVQKHKVSG-RITSCAWSPNGQYLV 155
+ LA+ P +L + FW+ A +G ++ S WS N + L+
Sbjct: 318 KALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELL 374
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 34.7 bits (76), Expect = 0.098
Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 13/145 (8%)
Query: 34 LVVGAGEKVMVYDPRDGSLLQL--LQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTS-- 89
L + V ++D GS +L + KG V ++ + DG+ A G + V +W S
Sbjct: 144 LAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSAS 203
Query: 90 -KMEGILKYSHSEAIQCLAYNPVTFHLASCAISDFAFWSMDIK----AVQKHK-VSGRIT 143
+ LK H + LA+N H+ + D + D++ V+ ++ + +
Sbjct: 204 NRQLRTLKGGHQSRVGSLAWNN---HILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVC 260
Query: 144 SCAWSPNGQYLVIGLASGAVTFRDK 168
WS +GQ L G V D+
Sbjct: 261 GLKWSGSGQQLASGGNDNVVHIWDR 285
Score = 32.7 bits (71), Expect = 0.39
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 140 GRITSCAWSPNGQYLVIGLASGAVTFRDKVGNEIQRILR 178
G +TS W+P+G+++ +GL + V D N R L+
Sbjct: 173 GPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLK 211
Score = 29.1 bits (62), Expect = 4.9
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 13/117 (11%)
Query: 52 LLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW-------TSKMEGILKY-SHSEAI 103
+++ + H V + + G G++ ASG D V IW S + + + H+ A+
Sbjct: 248 IVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAV 307
Query: 104 QCLAYNPVTFHLASC----AISDFAFWSMDIKAVQKHKVSG-RITSCAWSPNGQYLV 155
+ LA+ P +L + FW+ A +G ++ S WS N + L+
Sbjct: 308 KALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELL 364
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 34.7 bits (76), Expect = 0.098
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 38 AGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKK-FASGSADRNVIIWTSKM--EGI 94
A +KV V+D G+ ++ H V AVA+ + SGS D+ V++ +
Sbjct: 286 ADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVMKDGRQPSHSG 345
Query: 95 LKYSHSEAIQCLAYNPVTFHLASCAISDFAFWSMDIKAVQ 134
K+S ++ LA++P H ++ D DI+A Q
Sbjct: 346 FKWSVMSDVESLAWDPHCEHSFVVSLEDGTVKGFDIRAAQ 385
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 33.9 bits (74), Expect = 0.17
Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 13/128 (10%)
Query: 47 PRDGSL--LQLLQAHKGAVHAVAY-CGDGKKFASGSADRNVIIWTSKMEGILK-----YS 98
P++ SL Q+ +AH+G V VA+ F S D+ ++IW + K +
Sbjct: 212 PKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVA 271
Query: 99 HSEAIQCLAYNPVTFHLASCAISDFAFWSMDIKAVQK--HKVSG---RITSCAWSPNGQY 153
HS + CLA+NP + + +D D++ + H + W+P +
Sbjct: 272 HSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNET 331
Query: 154 LVIGLASG 161
++ G
Sbjct: 332 ILASCCLG 339
>At5g01770.1 68418.m00096 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]
Length = 1354
Score = 33.9 bits (74), Expect = 0.17
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 56 LQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKME--GILKYSHS------EAIQCLA 107
+ AH+G++ A+ ASGSA + + +++ K E GI+KY S + CLA
Sbjct: 1266 IDAHRGSLTALGVHRHAPIIASGSAKQLIKVFSLKGEQLGIIKYHTSFMGQQIGPVSCLA 1325
Query: 108 YNPVTFHLASCAISDF 123
++P LA+ A F
Sbjct: 1326 FHPYQMLLAAGAAGSF 1341
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 45 YDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSK 90
+ PR G L+ LQ H+ AV+ +A D F S S D V +W S+
Sbjct: 1067 WKPR-GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDSR 1111
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 33.9 bits (74), Expect = 0.17
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 16 KIEFSSVHTLCFSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHK-GAVHAVAYCGDGK 73
K S+V + FSP G + V G+ ++ V ++ G ++ + V V Y D
Sbjct: 276 KDHVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDAT 335
Query: 74 KFASGSADRNVIIWTSK 90
SGS D N+ +W +K
Sbjct: 336 YVISGSDDTNLRLWKAK 352
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 56 LQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILKYSH 99
L H+G V+AV + G SGS DR +++W + + G K S+
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLW-NWLSGSRKLSY 93
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 28 SPDGSQLVVG-AGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVII 86
+P S + +G +G V ++ P + L +Q H G V +VA+ +G A+ +R + I
Sbjct: 248 NPYNSVVGLGHSGGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKI 307
Query: 87 WTSKMEGILKYSHSEAIQCLAYN 109
W + ++ HS + L+++
Sbjct: 308 WDLRKFEEVQTIHSFHAKTLSFS 330
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 33.9 bits (74), Expect = 0.17
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 42 VMVYDPRDGSLLQLLQAHKGAVHAVAYC-GDGKKFASGSADRNVIIWTSKMEGILKYSHS 100
V ++D G H+ +V + D KF SGS D +V +W+ + L S
Sbjct: 790 VQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINEKRSLGTIWS 849
Query: 101 EA-IQCLAYNPVTFHLASCAISDFAFWSMDIKAVQ 134
A + C+ ++ + HL + +D+ + D++ V+
Sbjct: 850 PANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVK 884
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 33.5 bits (73), Expect = 0.23
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 20/161 (12%)
Query: 27 FSPDGSQLVVGAGEK--VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGS--ADR 82
F PD + + G K + ++D R + G + V + GK+F S S + R
Sbjct: 254 FHPDNCNVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGR 313
Query: 83 N-----VIIWTSKMEGILK---YSHSEAIQCLAYNPVT-FHLASCAISDFAFWSMD---- 129
N VI+W E L Y + C+ +P +A + A +S +
Sbjct: 314 NISENAVIVWDISREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFK 373
Query: 130 ---IKAVQKHKVSGRITSCAWSPNGQYLVIGLASGAVTFRD 167
K + H V+G C +SP+G+ L G + G+V D
Sbjct: 374 LNKYKRFEGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYD 414
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 33.5 bits (73), Expect = 0.23
Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 57 QAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILK-YSHSEAIQCLAYNPVT--F 113
+ H G V +++ D S S D+ V +W L ++H+ + + +NPV +
Sbjct: 325 RGHTGEVLDISWSKDNY-LLSASMDKTVRLWKVGSNDCLGVFAHNSYVTSVQFNPVNENY 383
Query: 114 HLASCAISDFAFWSMD-IKAVQKHKVSGRITSCAWSPNGQYLVIGLASGAVTFRDKVGNE 172
++ W++ V + I++ + P+GQ +IG +G+ F + G
Sbjct: 384 FMSGSIDGKVRIWNISGCSVVDWADLKDIISAVCYRPDGQGGIIGSLNGSCRFFNMSGEF 443
Query: 173 IQ 174
++
Sbjct: 444 LE 445
Score = 31.5 bits (68), Expect = 0.91
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 54 QLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW 87
Q ++AH GA+ A+ + DGK AS D V +W
Sbjct: 215 QDIKAHDGAILAMKFSNDGKFLASSGEDGIVRVW 248
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 33.5 bits (73), Expect = 0.23
Identities = 21/92 (22%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 21 SVHTLCFSPDGSQLV-VGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGS 79
S++++ FS DG+ L VG + ++D L+ +++ GA+ ++ DGK +G
Sbjct: 305 SINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGG 364
Query: 80 ADRNVIIWTSKMEGILKY--SHSEAIQCLAYN 109
D V +W+ + ++ + H+ + +A++
Sbjct: 365 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFD 396
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 33.1 bits (72), Expect = 0.30
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 18/120 (15%)
Query: 56 LQAHKGAVHAVAYCGDGKKFASGSADRNVIIW-TSKMEGILK------------YSHSEA 102
L HK V + DG FA+G AD ++ ++ K++ ++ Y H+E
Sbjct: 27 LSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEP 86
Query: 103 IQCLAYNPVTFHLASCA----ISDFAFWSMDIK-AVQKHKVSGRITSCAWSPNGQYLVIG 157
I L ++P + L S A I F F K A + + + + S ++ P+G++L+ G
Sbjct: 87 INDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLAG 146
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 33.1 bits (72), Expect = 0.30
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 18/120 (15%)
Query: 56 LQAHKGAVHAVAYCGDGKKFASGSADRNVIIW-TSKMEGILK------------YSHSEA 102
L HK V + DG FA+G AD ++ ++ K++ ++ Y H+E
Sbjct: 119 LSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEP 178
Query: 103 IQCLAYNPVTFHLASCA----ISDFAFWSMDIK-AVQKHKVSGRITSCAWSPNGQYLVIG 157
I L ++P + L S A I F F K A + + + + S ++ P+G++L+ G
Sbjct: 179 INDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLAG 238
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 33.1 bits (72), Expect = 0.30
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 53 LQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILK--YSHSEAIQCLAYNP 110
++ L+ H+ AV+ + G+ +GS DR V IW+ + L H I LA +
Sbjct: 298 IKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSS 357
Query: 111 VTFHLASCAISDFAF--W----SMDIKAVQKHKVSGRITSCAWSP 149
+AS A +DF W M I ++ H +G +T+ A+SP
Sbjct: 358 NNALVAS-ASNDFVIRVWRLPDGMPISVLRGH--TGAVTAIAFSP 399
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 46 DPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTS 89
D GS Q+H+ + AY +G F +GS+D N +W++
Sbjct: 437 DANTGSTSNASQSHQ--ILCCAYNANGTIFVTGSSDSNARVWSA 478
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 74 KFASGSADRNVIIWTSKMEGILKYSHSEA-IQCLAYNPVTFHLASCAISDFAFWSMDIK 131
K ASGS D +V +W L + A + C+ ++P + HL + SDF + D++
Sbjct: 811 KLASGSDDCSVKLWNINERNCLGTIRNIANVCCVQFSPQSSHLLAFGSSDFRTYCYDLR 869
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 32.7 bits (71), Expect = 0.39
Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 8/121 (6%)
Query: 41 KVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASG-SADRNVIIWTSKMEGIL---- 95
K + + P G L + + A +Y G+ SG SA R + S IL
Sbjct: 148 KALEWRPNGGKSLSIACRGGICIWAASYPGNMALVRSGGSALRGSLSRGSGTRWILVDFL 207
Query: 96 KYSHSEAIQCLAYNPVTFHLASCAI--SDFAFWSMDIKA-VQKHKVSGRITSCAWSPNGQ 152
+ + E I L+++P +LAS + S F W + A + G I+ WSP G
Sbjct: 208 RCQNDEQISALSWSPCGRYLASASYDSSSFTIWDVSQGAGTPIRRGLGGISMLKWSPTGD 267
Query: 153 Y 153
Y
Sbjct: 268 Y 268
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 32.7 bits (71), Expect = 0.39
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 42 VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSK 90
+ ++D R G+L+ H+G V V + F SG D + +W K
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYK 81
>At1g71460.1 68414.m08257 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 689
Score = 32.7 bits (71), Expect = 0.39
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 39 GEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGD---GKKFASGSADRNVIIWTSKMEG 93
G++V + + + ++ H G + CGD G++ GS RN I WT+ M G
Sbjct: 335 GKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSG 392
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 32.7 bits (71), Expect = 0.39
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 42 VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSK 90
+ ++D R G+L+ H+G V V + F SG D + +W K
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYK 81
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 32.7 bits (71), Expect = 0.39
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 42 VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW 87
V +D + G+LLQ HKG V+A+A + S AD VI++
Sbjct: 271 VQFWDSQHGTLLQAHSNHKGDVNALAASPSHNRVFSAGADGQVILY 316
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 32.3 bits (70), Expect = 0.52
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 27 FSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKF-ASGSADRNV 84
FS DG L G+ V + D G L++L H+ V + + ASGS D V
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEV 170
Query: 85 IIWTSKM-EGILKYSHSEAIQCLAYN 109
+W +K E I + I +A++
Sbjct: 171 RLWNAKTGECIRTHDFYRPIASIAFH 196
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 32.3 bits (70), Expect = 0.52
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 27 FSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKF-ASGSADRNV 84
FS DG L G+ V + D G L++L H+ V + + ASGS D V
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEV 170
Query: 85 IIWTSKM-EGILKYSHSEAIQCLAYN 109
+W +K E I + I +A++
Sbjct: 171 RLWNAKTGECIRTHDFYRPIASIAFH 196
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 31.9 bits (69), Expect = 0.69
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 38 AGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKK-FASGSADRNVIIWTSKM--EGI 94
A +KV V+D G+ ++ H V AVA+ + SGS D+ V++ +
Sbjct: 254 ADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVLKDGRQPSHSG 313
Query: 95 LKYSHSEAIQCLAYNPVTFHLASCAISDFAFWSMDIK 131
K+S ++ LA++P + H ++ D D++
Sbjct: 314 FKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDVR 350
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 31.5 bits (68), Expect = 0.91
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 45 YDPRDGSLLQ--LLQAHKGAVHAVAYCGDGKKFASGSADRNVI---IWTSKMEGILKYSH 99
YD D SL++ ++AHK + AV + DG++ + SAD +++ + T L+ +H
Sbjct: 35 YDS-DSSLVRERKVRAHKESCRAVRFIDDGQRIVTASADCSILATDVETGAQVAHLENAH 93
Query: 100 SEAIQCL 106
+A+ L
Sbjct: 94 EDAVNTL 100
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 31.5 bits (68), Expect = 0.91
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 20 SSVHTLCFSPDGSQLVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGS 79
S+VH++C+SP+G + + + V ++ G + L H+V +
Sbjct: 676 SNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIG 735
Query: 80 ADRNVIIW-TSKMEGILKYSHSEAIQCLAYNPVTFHLASCA 119
+ + +W T + + + H I LA +P T +AS +
Sbjct: 736 GYQAIELWNTMENKCMTVAGHECVISALAQSPSTGVVASAS 776
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 31.5 bits (68), Expect = 0.91
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 20 SSVHTLCFSPDGSQLVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGS 79
S+VH++C+SP+G + + + V ++ G + L H+V +
Sbjct: 678 SNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIG 737
Query: 80 ADRNVIIW-TSKMEGILKYSHSEAIQCLAYNPVTFHLASCA 119
+ + +W T + + + H I LA +P T +AS +
Sbjct: 738 GYQAIELWNTMENKCMTVAGHECVISALAQSPSTGVVASAS 778
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 31.5 bits (68), Expect = 0.91
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 20 SSVHTLCFSPDGSQLVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGS 79
S+VH++C+SP+G + + + V ++ G + L H+V +
Sbjct: 678 SNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIG 737
Query: 80 ADRNVIIW-TSKMEGILKYSHSEAIQCLAYNPVTFHLASCA 119
+ + +W T + + + H I LA +P T +AS +
Sbjct: 738 GYQAIELWNTMENKCMTVAGHECVISALAQSPSTGVVASAS 778
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 31.5 bits (68), Expect = 0.91
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 20 SSVHTLCFSPDGSQLVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGS 79
S+VH++C+SP+G + + + V ++ G + L H+V +
Sbjct: 678 SNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIG 737
Query: 80 ADRNVIIW-TSKMEGILKYSHSEAIQCLAYNPVTFHLASCA 119
+ + +W T + + + H I LA +P T +AS +
Sbjct: 738 GYQAIELWNTMENKCMTVAGHECVISALAQSPSTGVVASAS 778
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 31.5 bits (68), Expect = 0.91
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 20 SSVHTLCFSPDGSQLVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGS 79
S+VH++C+SP+G + + + V ++ G + L H+V +
Sbjct: 678 SNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIG 737
Query: 80 ADRNVIIW-TSKMEGILKYSHSEAIQCLAYNPVTFHLASCA 119
+ + +W T + + + H I LA +P T +AS +
Sbjct: 738 GYQAIELWNTMENKCMTVAGHECVISALAQSPSTGVVASAS 778
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 31.5 bits (68), Expect = 0.91
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 25 LCFSPDGSQLVVGAGEKVMVYDPRDGSL---LQLLQAHKGAVHAVAYCGDGKKFASGSAD 81
LC GS + G+ +K + RDG++ L +L H G V +A D + AS D
Sbjct: 342 LCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEAD--REASERRD 399
Query: 82 RNVIIWTSKMEGILK 96
+ I+++ ++ +K
Sbjct: 400 KKWIVYSGSLDKSVK 414
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 51 SLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKME----GILKYSHSEAIQCL 106
+L+Q L + AV A+A +G GS+D V W + + GILK H A+ CL
Sbjct: 286 TLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFWEREKQLNYGGILK-GHKLAVLCL 344
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 31.5 bits (68), Expect = 0.91
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 30 DGSQLVVGAGEKVM-VYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW- 87
D L+ G+ + V+D + S +Q L+ H V AV++ + +GS D V IW
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWH 257
Query: 88 --TSKMEGILKY 97
T ++E L Y
Sbjct: 258 ATTYRLENTLNY 269
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 31.5 bits (68), Expect = 0.91
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 30 DGSQLVVGAGEKVM-VYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW- 87
D L+ G+ + V+D + S +Q L+ H V AV + + +GS D V IW
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Query: 88 --TSKMEGILKYSHSEAIQCLAY 108
T ++E L Y E + + Y
Sbjct: 258 ATTYRLENTLNYG-LERVWAIGY 279
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 56 LQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKME--GILKYSHS------EAIQCLA 107
+ AH+G++ A+A ASGSA + + +++ + E GI++Y S ++ CL
Sbjct: 1257 IDAHRGSLTALAVHRHAPIIASGSAKQLIKVFSLQGEQLGIIRYYPSFMAQKIGSVSCLT 1316
Query: 108 YNPVTFHLASCAISDF 123
++P LA+ A F
Sbjct: 1317 FHPYQVLLAAGAADSF 1332
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 52 LLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILK 96
L+ ++AHK + A ++ G +FA+ S D+ V IW+ + + +K
Sbjct: 688 LMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSVENDARIK 732
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 31.1 bits (67), Expect = 1.2
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 8 VNKIHEADKIEFSSVHTLCFSPDGSQLVVGAGEKVMVYDPRDGSLLQLLQAHKG-----A 62
+ ++ +K+E + + P + V G + ++D + + L+ G +
Sbjct: 7 IEEVEIQNKLEVAPA-LISVHPSQKSVAVAVGSDLRIFDLIENCPVSLVDESDGPIRKES 65
Query: 63 VHAVAYCGDGKKFASGSADRNVIIWTSKMEGILKYSHSE-AIQCLAYNPVTFHLASCAIS 121
+ A+ Y GK F S D+ V IW++ L SE + +A + H+ C
Sbjct: 66 IRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVCSEKRVSAVAISSDDSHV--CYAD 123
Query: 122 DF-AFWSMDIKAVQKHKV-------------SGRITSCAWSPNGQYLV 155
F W +++ + K ITS +SP+G+Y++
Sbjct: 124 KFGVVWVIELDGINDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYIL 171
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 31.1 bits (67), Expect = 1.2
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 16/130 (12%)
Query: 11 IHEADKIEFSSVHTLCFSPDGSQLVVGAGE------KVMVYDPRDGSLLQL---LQAHKG 61
+HE+++I+ + V S DG +V GA + +V PR L+L L AH
Sbjct: 3327 LHESNQIQCAGV-----SHDGRIVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTA 3381
Query: 62 AVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILKY--SHSEAIQCLAYNPVTFHLASCA 119
V + ASGS D VIIW ++ I + N +T + + A
Sbjct: 3382 KVTCLRVSQPYMMIASGSDDCTVIIWDLSSLSFVRQLPDFPVPISAIYINDLTGEIVTAA 3441
Query: 120 ISDFAFWSMD 129
+ A WS++
Sbjct: 3442 GTVLAVWSIN 3451
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 131 KAVQKHKVSGRITSCAWSPNGQYLVIGLASGAVTFRDKVGNEIQRILR---EAAVWAVAF 187
K V + G +TS W+ +G L IGL + V D V N R LR E+ V ++A+
Sbjct: 126 KLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAW 185
Query: 188 SKMTL 192
+ L
Sbjct: 186 NNHIL 190
Score = 29.1 bits (62), Expect = 4.9
Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Query: 37 GAGEKVMVYDPR-DGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSK----- 90
G K++ D R S+++ H V + + GKK ASG D V IW +
Sbjct: 194 GMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASS 253
Query: 91 ---MEGILKY-SHSEAIQCLAYNPVTFHLASC--AISD--FAFWSMDIKA-VQKHKVSGR 141
+ + ++ H+ A++ LA+ P L + + D FW+ A + + +
Sbjct: 254 NPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQ 313
Query: 142 ITSCAWSPNGQYLV 155
+ S WS + + L+
Sbjct: 314 VCSLLWSKSERELL 327
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 42 VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEG 93
+ V+ D L+ + AH A+++V D F +GSAD V +W +++G
Sbjct: 259 IKVWRIADSKCLESIHAHDDAINSVMSGFDDLVF-TGSADGTVKVWKRELQG 309
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 55 LLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW 87
+L+ HK AV + G+ SGSAD+N+ +W
Sbjct: 362 ILKGHKSAVLCLGIAGN--LLLSGSADKNICVW 392
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 30.7 bits (66), Expect = 1.6
Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 10/169 (5%)
Query: 20 SSVHTLCFSPDGSQLVVGAGEKVM--VYDPR----DGSLLQLLQAHKGAVHAVAYCGDGK 73
S V+T+CF+ + L++ + + V+D R +L H V + GDG+
Sbjct: 272 SDVNTVCFADESGNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGR 331
Query: 74 KFASGSADRNVIIWTSKMEGILKYSHSEAIQCLAYNPVTFHLASCAISDFAFWSMDIKAV 133
F S D+ + +W + + E ++ ++ + A +
Sbjct: 332 YFISNGKDQTIKLWDIRKMSSSAPARHEVLRNYEWDYRWMDYPTEARDLKHPLDQSVSTY 391
Query: 134 QKHKVSGRITSCAWSP---NGQ-YLVIGLASGAVTFRDKVGNEIQRILR 178
+ H V + C +SP GQ Y+ G +V D V + +L+
Sbjct: 392 KGHSVLRTLIRCYFSPAHSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLK 440
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 30 DGSQLVVGAGEKVM-VYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW- 87
D L+ G+ + V+D + S +Q L H V AV + + +GS D V IW
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Query: 88 --TSKMEGILKYSHSEAIQCLAY 108
T ++E L Y E + + Y
Sbjct: 258 ATTYRLENTLNYG-LERVWAIGY 279
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 42 VMVYDPRDG-SLLQLLQAHKGAVHAVAYCG-DGKKFASGSADRNVIIWT--SKMEGILKY 97
+ ++D +G + Q+ + H V V + D FAS S DR + IW S
Sbjct: 123 IKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD 182
Query: 98 SHSEAIQCLAY 108
+H + + C+ Y
Sbjct: 183 AHQKGVNCVDY 193
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 30 DGSQLVVGAGEKVM-VYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW- 87
D L+ G+ + V+D + S +Q L H V AV + + +GS D V IW
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Query: 88 --TSKMEGILKYSHSEAIQCLAY 108
T ++E L Y E + + Y
Sbjct: 258 ATTYRLENTLNYG-LERVWAIGY 279
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 42 VMVYDPRDG-SLLQLLQAHKGAVHAVAYCG-DGKKFASGSADRNVIIWT--SKMEGILKY 97
+ ++D +G + Q+ + H V V + D FAS S DR + IW S
Sbjct: 123 IKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD 182
Query: 98 SHSEAIQCLAY 108
+H + + C+ Y
Sbjct: 183 AHQKGVNCVDY 193
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 30 DGSQLVVGAGEKVM-VYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW- 87
D L+ G+ + V+D + S +Q L H V AV + + +GS D V IW
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Query: 88 --TSKMEGILKYSHSEAIQCLAY 108
T ++E L Y E + + Y
Sbjct: 258 ATTYRLENTLNYG-LERVWAIGY 279
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 42 VMVYDPRDG-SLLQLLQAHKGAVHAVAYCG-DGKKFASGSADRNVIIWT--SKMEGILKY 97
+ ++D +G + Q+ + H V V + D FAS S DR + IW S
Sbjct: 123 IKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD 182
Query: 98 SHSEAIQCLAY 108
+H + + C+ Y
Sbjct: 183 AHQKGVNCVDY 193
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 57 QAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGIL-----KYSHSEAIQCLAYNP 110
+ H AV + C G+ SGSAD+++ +W ++ G+L + H ++CL +P
Sbjct: 315 RGHNMAV--LCMCVVGEMVCSGSADKSIGLWRREVTGMLCKFGVIHGHEGPVKCLQASP 371
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 53 LQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW 87
L +L AH G+V ++A CG+ S S +++I+W
Sbjct: 54 LAVLSAHVGSVSSLALCGE--FLLSASQGKDIIVW 86
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 1/81 (1%)
Query: 22 VHTLCFSPDGSQLVVGAGEK-VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSA 80
++ + P + AG+ +D G + + H +H V + +GS
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 81 DRNVIIWTSKMEGILKYSHSE 101
D IW K +K S+
Sbjct: 222 DGTARIWDCKTGKCVKVIGSQ 242
>At5g62210.1 68418.m07811 embryo-specific protein-related contains
weak similarity to embryo-specific protein 3
(GI:3335171) [Arabidopsis thaliana]
Length = 223
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/53 (24%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 305 KVRIKCHDRVQKIAIYKHRLAVQLPERVVVYEQGDVEGMLYRVRENFPKNLMF 357
+V+ KC + + + IY+ +PE V +Y++G + + + +N P+N+ +
Sbjct: 96 QVKGKCLNTICSVYIYRSGTDGWIPETVEIYKEGS-KSVKFDFNKNVPENIWY 147
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 31 GSQLVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW 87
G+ G V ++D G+L++ L G + +A D K + ++ N+ +W
Sbjct: 244 GTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVW 300
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 137 KVSGRITSCAWSPNGQYLVIGLASGAVTFRDKVG-NEIQRIL---------REAAVWAVA 186
+VSGR S WSP+ + + G + G + D +E+ RI E VW++
Sbjct: 196 RVSGRALSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSEICVWSLL 255
Query: 187 FSKMTLLVT-DWNETLSFY 204
+ ++LV+ D T+ F+
Sbjct: 256 SLRCSVLVSGDSTGTVQFW 274
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 42 VMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIW 87
V +D G+LL+ HKG V+ +A + S AD VI++
Sbjct: 271 VQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVILY 316
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 139 SGRITSCAWSPNGQYLVIGLASGAVTFRDKVGNEIQRILR---EAAVWAVAFSKMTL 192
+G +TS W+ +G L +GL + V D V N R LR E+ V ++A++ L
Sbjct: 152 NGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAWNNHIL 208
Score = 28.7 bits (61), Expect = 6.4
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 14/133 (10%)
Query: 37 GAGEKVMVYDPR-DGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKM---- 91
G K++ D R S++ H V + + GKK ASG D V IW +
Sbjct: 212 GMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSN 271
Query: 92 ---EGILKY-SHSEAIQCLAYNPVTFHLASC--AISD--FAFWSMDIKA-VQKHKVSGRI 142
+ + ++ H+ A++ LA+ P L + + D FW+ A + + ++
Sbjct: 272 PTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQV 331
Query: 143 TSCAWSPNGQYLV 155
S WS + + L+
Sbjct: 332 CSLLWSKSERELL 344
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 140 GRITSCAWSPNGQYLVIGLASGAVTFRDKVGNEIQRILR 178
G +TS W+ +G L +GL + V D V N R LR
Sbjct: 169 GPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLR 207
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 29.1 bits (62), Expect = 4.9
Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 18/200 (9%)
Query: 25 LCFSPDGSQLVV--GAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADR 82
+ FS GS+ + G G+ V ++D + ++ L+ H + V Y + AS S
Sbjct: 98 ISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGG 157
Query: 83 NVIIW---TSKMEGILKYSHSEAIQCLAYNPVTFHLASCAISD--FAFW-----SMDIKA 132
++I+ + LK + + ++ L Y+ + HL A D W S +
Sbjct: 158 DLIVHNLASGARATELKDPNGQVLRLLDYSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSW 217
Query: 133 VQKHKVSGRITSCAWSPNGQYLV--IGLASGAVTFRDKVGNEIQRILREAAVWAVAF--S 188
+++H S +SP+ + ++ +G+ T+ I EA ++AF +
Sbjct: 218 LKQH--SAPTAGVCFSPSNEKIIASVGMDKKLYTYDSGSRRSSSCIAYEAPFSSLAFGDN 275
Query: 189 KMTLLVTDWNETLSFYTIQG 208
L+ N + FY I+G
Sbjct: 276 GYILVAGTSNGRVVFYDIRG 295
>At3g61310.1 68416.m06861 DNA-binding family protein contains a AT
hook motif (DNA binding motifs with a preference for A/T
rich regions), Pfam:PF02178
Length = 354
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 187 FSKMTLLVTDWNETLSFYTIQ-GMAAVSIMLLDSLILVGGVGGWAILTAEGVPIITTSQD 245
F ++L + N T + Y + G AVS+ D ++ GG+GG ++ A V +I S
Sbjct: 222 FELISLSTSYLNTTDNDYPNRTGSLAVSLASPDGRVIGGGIGG-PLIAASQVQVIVGS-- 278
Query: 246 WVWAI 250
++WAI
Sbjct: 279 FIWAI 283
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 48 RDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGILKY 97
++G L + +AH G+V +A F +GS D V +W +K ++ +
Sbjct: 2363 KNGMLWYIPKAHLGSVTKIATIPRTSLFLTGSKDGEVKLWDAKAAKLIHH 2412
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 56 LQAHKGAVHAVAYCGDGKKFASGSADRNVIIW---TSKMEGILKYSHSEAIQCLAYNP 110
LQ H G V+++ + + + S S D +I+W TS+ +K + + C A++P
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTC-AFSP 117
Score = 28.3 bits (60), Expect = 8.5
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 18 EFSSVHT---LCFSPDGSQ---LVVGAGEKVM-VYDPRDGS-LLQLLQAHKGAVHAVAYC 69
EF S HT L S GS + G+ + ++D R S ++ H+G V+ V +
Sbjct: 198 EFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFF 257
Query: 70 GDGKKFASGSAD 81
DG +F +GS D
Sbjct: 258 PDGYRFGTGSDD 269
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 56 LQAHKGAVHAVAYCGDGKKFASGSADRNVIIW---TSKMEGILKYSHSEAIQCLAYNP 110
LQ H G V+++ + + + S S D +I+W TS+ +K + + C A++P
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTC-AFSP 117
Score = 28.3 bits (60), Expect = 8.5
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 18 EFSSVHT---LCFSPDGSQ---LVVGAGEKVM-VYDPRDGS-LLQLLQAHKGAVHAVAYC 69
EF S HT L S GS + G+ + ++D R S ++ H+G V+ V +
Sbjct: 198 EFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFF 257
Query: 70 GDGKKFASGSAD 81
DG +F +GS D
Sbjct: 258 PDGYRFGTGSDD 269
Score = 28.3 bits (60), Expect = 8.5
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 18 EFSSVHTLCFSPDGSQLVVG--AGEKVMVYDPRDGSL---LQLLQ-AHKGAVHAVAYCGD 71
E V ++ FS G L G + V+D G + L L Q +H+ + + D
Sbjct: 293 ENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSAD 352
Query: 72 GKKFASGSADRNVIIW 87
G +GS D N+ IW
Sbjct: 353 GSALCTGSWDSNLKIW 368
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 68 YCGDGKKFASGSADRNVIIW---TSKMEGILKYSHSEAIQCLAYNPVTFHLASCAI-SDF 123
+ DGK AS D+ ++W T K + L+ H+ I + ++P LA+ +
Sbjct: 659 FSSDGKMLASAGHDKKAVLWYTDTMKPKTTLE-EHTAMITDIRFSPSQLRLATSSFDKTV 717
Query: 124 AFWSMDIKAVQKHKVSGR---ITSCAWSP 149
W D K G +TS + P
Sbjct: 718 RVWDADNKGYSLRTFMGHSSMVTSLDFHP 746
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/76 (21%), Positives = 34/76 (44%)
Query: 13 EADKIEFSSVHTLCFSPDGSQLVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDG 72
E +I+ L S D + + V + V + G +L+ H +V+ + +
Sbjct: 352 ETGRIQTDRAIQLDTSDDPALVFVPCMKTVKGFGMWSGRTTLMLRGHYESVNTCCFNSND 411
Query: 73 KKFASGSADRNVIIWT 88
++ + ADR +I+W+
Sbjct: 412 QELYTSGADRQIIVWS 427
>At1g08315.1 68414.m00918 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 325
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 28 SPDGSQLVVGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCG 70
S DG + V GA + DP GS L++ + GA+ +A CG
Sbjct: 213 SEDGMRRVSGANVLADLLDPCTGSSLRIKENSVGALLNLARCG 255
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 36 VGAGEKVMVYDPRDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSKMEGIL 95
VG +++ + L+ L+ + G+V ++A+ DGK S D V +W + L
Sbjct: 351 VGNEGYILLVSTKTKELIGTLKMN-GSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCL 409
Query: 96 KYSHSEAIQC 105
E C
Sbjct: 410 YKGVDEGSTC 419
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 28.3 bits (60), Expect = 8.5
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 18 EFSSVHT---LCFSPDGSQ---LVVGAGEKVM-VYDPRDGS-LLQLLQAHKGAVHAVAYC 69
EF S HT L S GS + G+ + ++D R S ++ H+G V+ V +
Sbjct: 136 EFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFF 195
Query: 70 GDGKKFASGSAD 81
DG +F +GS D
Sbjct: 196 PDGYRFGTGSDD 207
Score = 28.3 bits (60), Expect = 8.5
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 18 EFSSVHTLCFSPDGSQLVVG--AGEKVMVYDPRDGSL---LQLLQ-AHKGAVHAVAYCGD 71
E V ++ FS G L G + V+D G + L L Q +H+ + + D
Sbjct: 231 ENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSAD 290
Query: 72 GKKFASGSADRNVIIW 87
G +GS D N+ IW
Sbjct: 291 GSALCTGSWDSNLKIW 306
>At4g13740.1 68417.m02133 expressed protein
Length = 605
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 48 RDGSLLQLLQAHKGAVHAVAYCGDGKKFASGSADRN 83
RD SL +A A+H YCG +F S S+D N
Sbjct: 411 RDKSLTVSERADSFALHHKDYCGKHIRFDSSSSDEN 446
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 28.3 bits (60), Expect = 8.5
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 15/122 (12%)
Query: 53 LQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSK----MEGILKYSHSEAIQCLAY 108
L +LQ H V + + K + S DRN +W+ + + ++ + A C+ +
Sbjct: 48 LHVLQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQW 107
Query: 109 NPV--TFHLAS-------CAISDFAFWSMDIKAVQKHKVSGRITSCAWSPNGQYLVIGLA 159
+P F + S C W + ++H+ S +TS AW PN L
Sbjct: 108 SPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESS--VTSVAWHPNNVLLATTST 165
Query: 160 SG 161
G
Sbjct: 166 DG 167
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 28.3 bits (60), Expect = 8.5
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 15/122 (12%)
Query: 53 LQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSK----MEGILKYSHSEAIQCLAY 108
L +LQ H V + + K + S DRN +W+ + + ++ + A C+ +
Sbjct: 48 LHVLQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQW 107
Query: 109 NPV--TFHLAS-------CAISDFAFWSMDIKAVQKHKVSGRITSCAWSPNGQYLVIGLA 159
+P F + S C W + ++H+ S +TS AW PN L
Sbjct: 108 SPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESS--VTSVAWHPNNVLLATTST 165
Query: 160 SG 161
G
Sbjct: 166 DG 167
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 28.3 bits (60), Expect = 8.5
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 15/122 (12%)
Query: 53 LQLLQAHKGAVHAVAYCGDGKKFASGSADRNVIIWTSK----MEGILKYSHSEAIQCLAY 108
L +LQ H V + + K + S DRN +W+ + + ++ + A C+ +
Sbjct: 48 LHVLQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQW 107
Query: 109 NPV--TFHLAS-------CAISDFAFWSMDIKAVQKHKVSGRITSCAWSPNGQYLVIGLA 159
+P F + S C W + ++H+ S +TS AW PN L
Sbjct: 108 SPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESS--VTSVAWHPNNVLLATTST 165
Query: 160 SG 161
G
Sbjct: 166 DG 167
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 10/59 (16%)
Query: 59 HKGAVHA-----VAYCGDGKKFASGSADRNVIIWTSKMEG-----ILKYSHSEAIQCLA 107
HKG +H + G SG AD+N+ +W +G + H ++CLA
Sbjct: 369 HKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKRNGDGSHTCLSVLMDHEGPVKCLA 427
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.135 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,685,378
Number of Sequences: 28952
Number of extensions: 354493
Number of successful extensions: 1530
Number of sequences better than 10.0: 165
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 1054
Number of HSP's gapped (non-prelim): 458
length of query: 363
length of database: 12,070,560
effective HSP length: 82
effective length of query: 281
effective length of database: 9,696,496
effective search space: 2724715376
effective search space used: 2724715376
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 60 (28.3 bits)
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