Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000476-TA|BGIBMGA000476-PA|undefined
         (153 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    26   0.16 
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    25   0.38 
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    25   0.38 
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    24   0.66 

>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 25.8 bits (54), Expect = 0.16
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 5/47 (10%)

Query: 107 KNVRKNDPTFLDMLXXXXXXXXXXXXQPPAEKTSFWRRLTMKNKNKR 153
           K V +N+  FLD+              P +E+ +FW+R+   N N +
Sbjct: 491 KPVTRNEMNFLDI-----GTKLTTGVDPDSERMAFWQRILKINPNNK 532


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 24.6 bits (51), Expect = 0.38
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 5/47 (10%)

Query: 107 KNVRKNDPTFLDMLXXXXXXXXXXXXQPPAEKTSFWRRLTMKNKNKR 153
           K V +N+  FLD+              P +++ +FW+R+   N N +
Sbjct: 491 KPVTRNEMNFLDI-----GTKLTTGVDPDSDRMAFWQRILKINPNNK 532


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 24.6 bits (51), Expect = 0.38
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 5/47 (10%)

Query: 107 KNVRKNDPTFLDMLXXXXXXXXXXXXQPPAEKTSFWRRLTMKNKNKR 153
           K V +N+  FLD+              P +++ +FW+R+   N N +
Sbjct: 491 KPVTRNEMNFLDI-----GTKLTTGVDPDSDRMAFWQRILKINPNNK 532


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 81  PNEFKVENTSPEKLKAELSAEAVKIEKNVRK 111
           P   K+++T PE L  + +    K++ NVRK
Sbjct: 53  PEGKKLKSTIPEALSTDCAKCNEKVKANVRK 83


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.314    0.130    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,884
Number of Sequences: 317
Number of extensions: 968
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 153
length of database: 114,650
effective HSP length: 52
effective length of query: 101
effective length of database: 98,166
effective search space:  9914766
effective search space used:  9914766
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)
S2: 40 (20.2 bits)