Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000475-TA|BGIBMGA000475-
PA|IPR001580|Calreticulin/calnexin, IPR008985|Concanavalin A-like
lectin/glucanase, IPR000886|Endoplasmic reticulum targeting sequence,
IPR009169|Calreticulin
(398 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe... 120 4e-28
SPBP4H10.19c |||calreticulin/calnexin homolog|Schizosaccharomyce... 45 2e-05
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 29 1.2
SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein 5|... 27 6.1
SPAC23G3.05c |||regulator of G-protein signaling |Schizosaccharo... 26 8.1
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 26 8.1
SPAC4H3.02c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 8.1
>SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 560
Score = 120 bits (289), Expect = 4e-28
Identities = 91/273 (33%), Positives = 121/273 (44%), Gaps = 38/273 (13%)
Query: 63 DKGLKTSEDARFYALSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKD 121
+ GL ++A +A+S +F +P + K LVVQ+ V E+ ++CGG YLK+ + +
Sbjct: 89 EAGLVMKDEAAHHAISYEFDEPINEPEKDLVVQYEVNPEEGLNCGGAYLKLL-AEPTHGE 147
Query: 122 MHGETPYEIMFGPDICGPGTKKVHVIFSYKG-------KNHLIKKDIRCKDDVYTHLYTL 174
M Y IMFGPD CG + VH IF +K + HL + T+LYTL
Sbjct: 148 MSNSIDYRIMFGPDKCGVNDR-VHFIFKHKNPLTGEYSEKHLDSRPASLLKPGITNLYTL 206
Query: 175 IVKPDNTYEVLIDNEKVESGDLEADW--DFLPPKKIKDPE-----------------AKK 215
IVKPD T+EV I+ + V G L D+ LPP +I DPE A K
Sbjct: 207 IVKPDQTFEVRINGDVVRQGSLFYDFIPPVLPPVEIYDPEDIKPADWVDEPEIPDPNAVK 266
Query: 216 PEDWXXXXXXXXXXXXXXX----XXXXXXHIPDPDATKXXXXXXXXXXXXXXXXIDNPDY 271
P+DW +IPDP+A K I NP
Sbjct: 267 PDDWDEDAPRMIPDPDAVKPEDWLEDEPLYIPDPEAQKPEDWDDEEDGDWIPSEIINPKC 326
Query: 272 K-----GVWAPKQIDNPAYKGPWVHPEIDNPEY 299
G W P I NP Y+GPW P I NPE+
Sbjct: 327 IEGAGCGEWKPPMIRNPNYRGPWSPPMIPNPEF 359
Score = 54.8 bits (126), Expect = 2e-08
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 266 IDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGT 325
I NP+Y+G W+P I NP + G W +I NP+Y D + + VG +LW ++
Sbjct: 340 IRNPNYRGPWSPPMIPNPEFIGEWYPRKIPNPDYFDDDHPSHFGPLYGVGFELWTMQPNI 399
Query: 326 IFDDFLITDDPAAAKERG-EVIKKRQEGEKKM 356
F + + A+ G E + + E+++
Sbjct: 400 RFSNIYVGHSIEDAERLGNETFLPKLKAEREL 431
>SPBP4H10.19c |||calreticulin/calnexin homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 44.8 bits (101), Expect = 2e-05
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 13/194 (6%)
Query: 23 FEEKFPDD---SWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL-S 78
F E+F + +W S W K+ G + L S D+ GL T + + + L S
Sbjct: 33 FSEQFTSEDITTWRSRW--RAPVNKDLGVWDLVEAPG-SHLRDEYGLITLKSNKPHILIS 89
Query: 79 RKFKPFSNEGK--PLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDI 136
P + + P+V+ F VK + CG Y+ + + K++ E P I FG
Sbjct: 90 NLENPTTRQSSSVPIVLSFQVKPTKPWTCGHAYVSLVH-QSNPKNVSKEPPSVIRFGVKK 148
Query: 137 CGPGTKKVHVIFSYKGK--NHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESG 194
CG I SY GK HL + T +YTL+++ + T + D V +G
Sbjct: 149 CGMFDYISLSIISYDGKVSCHLYDAPPSGLVEGRTSMYTLLLQ-NTTVVIRRDQSVVYTG 207
Query: 195 DLEADWDFLPPKKI 208
D+ ++ P K I
Sbjct: 208 DVGTNFFHSPTKWI 221
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 29.1 bits (62), Expect = 1.2
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 149 SYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLE-ADWDFLPPKK 207
S + K H KK +D Y+H+Y + P + + + ++ ES E + D+LP
Sbjct: 137 STRKKEHFNKKPSFPRDTEYSHIYNMKYDPRSGIGIRVKRQEPESLKKENNNSDYLPKSA 196
Query: 208 IKDPEAKKPED 218
+K + P+D
Sbjct: 197 MKQKKG-GPKD 206
>SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 736
Score = 26.6 bits (56), Expect = 6.1
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 106 GGGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGTK----KVHVIFSYKGKNHLIKKDI 161
G +LKV + E M ETP +I++ + G+ +H K + KK++
Sbjct: 614 GKKFLKVDEATREDMLMSAETPDDILWITTLISTGSSMSHFPLHAYLEAKERQEFTKKNL 673
Query: 162 R--CKDDVYTH 170
CK+D + +
Sbjct: 674 LLFCKEDEFLY 684
>SPAC23G3.05c |||regulator of G-protein signaling
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 343
Score = 26.2 bits (55), Expect = 8.1
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 110 LKVFDCKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYT 169
+K+F + +K + +P+E+M P + P K H + ++R +DV T
Sbjct: 154 VKMFTQIIIEKYFNPASPHEVMLPPQLVQP---------ILDCKEHQRQDELRLFEDVET 204
Query: 170 HLYTLIVKP 178
+L ++KP
Sbjct: 205 YLLNFLLKP 213
>SPAC31G5.19 |||ATPase with bromodomain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1190
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 25 EKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDA 72
+ F +D + +W EH K ++ + + FS+ DD+ + SE +
Sbjct: 49 QAFQEDEGDEDWEEEEHKPKAKRRYNTRSNESFSE-GDDEPFEVSESS 95
>SPAC4H3.02c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 391
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 192 ESGDLEADWDFLPPKKIKDPEAKKPEDW 219
E L+ LP + K P AKKPED+
Sbjct: 157 EKNTLDLKHCLLPSPEYKAPPAKKPEDY 184
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.139 0.440
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,785,361
Number of Sequences: 5004
Number of extensions: 78833
Number of successful extensions: 132
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 120
Number of HSP's gapped (non-prelim): 9
length of query: 398
length of database: 2,362,478
effective HSP length: 74
effective length of query: 324
effective length of database: 1,992,182
effective search space: 645466968
effective search space used: 645466968
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 55 (26.2 bits)
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