Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000475-TA|BGIBMGA000475-
PA|IPR001580|Calreticulin/calnexin, IPR008985|Concanavalin A-like
lectin/glucanase, IPR000886|Endoplasmic reticulum targeting sequence,
IPR009169|Calreticulin
(398 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 353 1e-97
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 333 2e-91
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 326 1e-89
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 318 7e-87
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 151 1e-36
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 89 8e-18
08_02_1590 + 28074137-28074247,28074791-28074886,28074976-280750... 38 0.014
10_08_1045 - 22535516-22535593,22535681-22535756,22535843-225359... 30 3.7
01_01_0690 - 5306754-5307047,5307107-5307279,5308223-5308370,530... 29 4.9
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 353 bits (868), Expect = 1e-97
Identities = 172/339 (50%), Positives = 218/339 (64%), Gaps = 6/339 (1%)
Query: 20 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 77
+VFF+EKF +D WES WV SE E G++ T+GK+ DPED KG++TSED RFYA+
Sbjct: 30 EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPED-KGIQTSEDYRFYAI 87
Query: 78 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDIC 137
S ++ FSN+ K LV+QF+VKHEQ +DCGGGY+K+ ++QK G+TPY IMFGPDIC
Sbjct: 88 SAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDIC 147
Query: 138 GPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLE 197
G TKKVH IF+ KNHLIKKD+ C+ D +H+YTLI+ PD TY +LIDN + +SG +
Sbjct: 148 GYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSIY 207
Query: 198 ADWDFLPPKKIKDPEAKKPEDWXXXXXX-XXXXXXXXXXXXXXXHIPDPDATKXXXXXXX 256
WD LPPK+IKDPEAKKPEDW IPDPDA K
Sbjct: 208 EHWDILPPKQIKDPEAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDWDDE 267
Query: 257 XXXXXXXXXIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGL 316
I NP+YKG W K+I NP Y+G W P IDNP++ D +Y D + +G+
Sbjct: 268 EDGEWTAPTIPNPEYKGPWKQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGI 327
Query: 317 DLWQVKSGTIFDDFLITDDPAAAKE-RGEVIKKRQEGEK 354
+LWQVKSGT+FD+FLITDDP AK E K ++ EK
Sbjct: 328 ELWQVKSGTLFDNFLITDDPELAKTFAEETWGKHKDAEK 366
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 333 bits (818), Expect = 2e-91
Identities = 164/349 (46%), Positives = 213/349 (61%), Gaps = 15/349 (4%)
Query: 20 DVFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDD----------KGLK 67
+VFF+EKF DD WE WV SE G++ T+GK++ D +D G++
Sbjct: 26 EVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGMCEVTLLLCAGIQ 84
Query: 68 TSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETP 127
TSED RFYA+S K+ FS++ K LV+QF+VKHEQ +DCGGGY+K+ ++QK GETP
Sbjct: 85 TSEDYRFYAISAKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETP 144
Query: 128 YEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLID 187
Y IMFGPDICG TKKVH I + GKNHLIKKD+ CK D TH+YTLI++PD Y +LID
Sbjct: 145 YSIMFGPDICGYATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTLIIRPDAKYSILID 204
Query: 188 NEKVESGDLEADWDFLPPKKIKDPEAKKPEDWXXXXXX-XXXXXXXXXXXXXXXHIPDPD 246
N + ++G + DW+ +PPK +DPEAKKPEDW I DP+
Sbjct: 205 NTEKQTGSIYDDWNIIPPKNKRDPEAKKPEDWDDNEYIPDPEDKKPEGYDDIPKEITDPE 264
Query: 247 ATKXXXXXXXXXXXXXXXXIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLY 306
ATK I NP+YKG W K++ NP YKG W P I NP+Y D +Y
Sbjct: 265 ATKPEDWDDEEDGEWTAPTIPNPEYKGPWNQKKLKNPNYKGKWKAPLIPNPDYKDDPYIY 324
Query: 307 KRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKE-RGEVIKKRQEGEK 354
D + +G++LWQVKSGT+FD+ LITDDP AK+ E K ++ EK
Sbjct: 325 AFDSLNHIGIELWQVKSGTLFDNILITDDPEYAKKFAEETWAKHKDAEK 373
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 326 bits (802), Expect = 1e-89
Identities = 153/328 (46%), Positives = 208/328 (63%), Gaps = 5/328 (1%)
Query: 20 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 77
+V FEE+F +D WES WV S+ E G FK TAG++ DP DDKG++T+ DAR +A+
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDP-DDKGIQTTLDARHFAI 85
Query: 78 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDIC 137
S K FSN+G+ LV+Q+++K EQDI+CGGGY+K+ + QK G+TPY +MFGPDIC
Sbjct: 86 SAKIPEFSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPYSLMFGPDIC 145
Query: 138 GPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLE 197
G TKK+H+I SY+G+N+ IKKD++C+ D TH+YT I++PD +Y +L+DN + ESG +
Sbjct: 146 GTQTKKLHLILSYQGQNYPIKKDLQCETDKLTHVYTFILRPDASYSILVDNRERESGSMY 205
Query: 198 ADWDFLPPKKIKDPEAKKPEDWXXXXXXXX-XXXXXXXXXXXXXHIPDPDATKXXXXXXX 256
DWD LPP+KIKD AKKP+DW IPDP K
Sbjct: 206 TDWDILPPRKIKDVHAKKPKDWDDREYIEDPDAVKPEGYDSIPKEIPDPKDKKPDTWDDD 265
Query: 257 XXXXXXXXXIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGL 316
I NP YKG W K+I NP YKG W P IDNPE+ D +LY + +G+
Sbjct: 266 DDGIWKPRMIPNPAYKGPWKRKKIKNPNYKGKWKIPWIDNPEFEDDPDLYVLKPLKYIGI 325
Query: 317 DLWQVKSGTIFDDFLITDDPAAAKERGE 344
++WQVK+G++FD+ LI DDP A++ E
Sbjct: 326 EVWQVKAGSVFDNILICDDPEYARKAAE 353
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 318 bits (780), Expect = 7e-87
Identities = 154/343 (44%), Positives = 210/343 (61%), Gaps = 6/343 (1%)
Query: 17 INCDVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARF 74
++ +V FEE+F DD W S WV S+ E G FK TAG + DP DD+G++T+ DA+
Sbjct: 25 VSGEVIFEERF-DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDP-DDRGIQTTSDAKH 82
Query: 75 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGP 134
+A+S KF FSN+ + LVVQ+++K EQDI+CGG Y+K+ + QK G+TPY MFGP
Sbjct: 83 FAISAKFPEFSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGDTPYSFMFGP 142
Query: 135 DICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESG 194
DICG TKK+H+I SY+G+N+ IKKD++C+ D TH YT I++PD +Y +L+DN + E G
Sbjct: 143 DICGDQTKKLHLILSYQGQNYPIKKDLKCETDKLTHFYTFILRPDASYSLLVDNREREFG 202
Query: 195 DLEADWDFLPPKKIKDPEAKKPEDWXXXXXXXX-XXXXXXXXXXXXXHIPDPDATKXXXX 253
+ DWD LPP+KIK+ AKKP+DW IPDP K
Sbjct: 203 SMYTDWDILPPRKIKESNAKKPKDWDDREYIEDPDEVKPEGYDSIPKEIPDPKDKKPESW 262
Query: 254 XXXXXXXXXXXXIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICA 313
I NP+YKG W K+I NP YKG W P IDNPE+ D +LY +
Sbjct: 263 DDDDDGVWKPRMIPNPEYKGRWKRKKIKNPNYKGKWKIPWIDNPEFEDDPDLYVLKPLQY 322
Query: 314 VGLDLWQVKSGTIFDDFLITDDPAAAKE-RGEVIKKRQEGEKK 355
VG+++WQVK+G++FD+ LI DDP A+ EV +E EK+
Sbjct: 323 VGIEVWQVKAGSVFDNILICDDPEYARSVVDEVRAANKEAEKE 365
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 151 bits (365), Expect = 1e-36
Identities = 130/397 (32%), Positives = 182/397 (45%), Gaps = 70/397 (17%)
Query: 20 DVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSR 79
D F E F D+S+E WV S GK+ K K SD +D GL SE A+ YA+ +
Sbjct: 24 DPLFYEPF-DESFEGRWVLS---GKDDYKGVWKHEK--SDGHEDYGLLVSEKAKKYAIIK 77
Query: 80 KF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPD 135
+ +P + + +V+QF V+ + ++CGG YLK D + K+ ETPY IMFGPD
Sbjct: 78 ELDEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTIMFGPD 137
Query: 136 ICGPGTKKVHVIFSYK----GK--NHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLID-N 188
CG T KVH I +K GK H +K D +H+YT I+KPDN +L+D
Sbjct: 138 KCG-STNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGE 196
Query: 189 EKVESGDLEADWDF----LPPKKIKDPEAKKPEDWXXXXX--XXXXXXXXXXXXXXXXHI 242
EK ++ L AD DF +P K I DP+ KKPEDW I
Sbjct: 197 EKKKANFLSAD-DFEPSLIPSKTIPDPDDKKPEDWDERAKIPDPDAVKPDDWDEDAPMEI 255
Query: 243 PDPDATKXXXXXXXXXXXXXXXXIDNP-----DYKGVWAPKQIDN--------------- 282
D +ATK + P + G W +IDN
Sbjct: 256 EDEEATKPEGWLDDEPEEIDDPEANKPEDWDDEEDGEWEAPKIDNPKCEEAPGCGEWKRP 315
Query: 283 ----PAYKGPWVHPEIDNPEY--------TPDSNLYKRDE-----ICAVGLDLWQVKSGT 325
PAYKG W P IDNP Y P+ ++ D+ I A+G+++W ++ G
Sbjct: 316 MKQNPAYKGKWHAPLIDNPNYKGIWKPQEIPNPEYFELDKPDSDPIAAIGIEIWTMQDGI 375
Query: 326 IFDDFLITDDPAAA--------KERGEVIKKRQEGEK 354
+FD+ LI DD A K + EV K++++ E+
Sbjct: 376 LFDNILIADDEKVATSILEKSWKPKYEVEKEKEKAEE 412
>03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 88.6 bits (210), Expect = 8e-18
Identities = 38/64 (59%), Positives = 47/64 (73%)
Query: 152 GKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDP 211
G NHLIKKD+ C+ D TH+YTLI++PD Y +LIDN + +G + D D LPPKK KDP
Sbjct: 515 GNNHLIKKDVPCETDQLTHVYTLIIRPDAKYSILIDNTEKRTGSIYGDCDNLPPKKKKDP 574
Query: 212 EAKK 215
EAKK
Sbjct: 575 EAKK 578
>08_02_1590 +
28074137-28074247,28074791-28074886,28074976-28075023,
28075278-28075430
Length = 135
Score = 37.9 bits (84), Expect = 0.014
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 320 QVKSGTIFDDFLITDDPAAAKE-RGEVIKKRQEGEK 354
+VKSGT+FD+ LITDDP AK+ E K ++ EK
Sbjct: 37 RVKSGTLFDNILITDDPEYAKKFAEETWAKHKDAEK 72
>10_08_1045 -
22535516-22535593,22535681-22535756,22535843-22535946,
22536048-22536176,22536539-22536700,22537029-22537259,
22537345-22537428,22537515-22537583,22537671-22537739,
22537827-22537889,22537913-22538052,22538527-22539097
Length = 591
Score = 29.9 bits (64), Expect = 3.7
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 18/152 (11%)
Query: 55 KFFSDPEDDKGLKTSE---DARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLK 111
K D D +KTSE D+ +A S K +P E + L + + E+ G +K
Sbjct: 304 KNVQDIPSDSDIKTSEKRVDSTTHATSHKDRP---ETESLTRKLIMLIEEQ----GKEMK 356
Query: 112 VFDCKLEQKDMHGE----TPYEIMFGPDICGPGTK--KVHVIFSYKGKNHLIKKDIRCKD 165
+ K Q+ MH + T F + P +K K +V S+ + H+IKK +C
Sbjct: 357 --EMKQNQQSMHNQIQSLTNIIAAFKEEKTIPTSKNSKPNVCKSFDKETHIIKKKFKCTA 414
Query: 166 DVYTHLYTLIVKPDNTYEVLIDNEKVESGDLE 197
+ + +++ P++ V ID+ + ++
Sbjct: 415 EDEETIKSIMSAPESQLVVHIDDVSISQKTMQ 446
>01_01_0690 -
5306754-5307047,5307107-5307279,5308223-5308370,
5309110-5309356,5309694-5309839,5312482-5312707,
5313652-5313874,5314054-5314202,5315345-5315514,
5316064-5316135,5317610-5317741,5317813-5317900,
5319440-5319656,5320123-5320306,5320644-5320727,
5321148-5321242,5321519-5321562,5321707-5322367,
5323053-5323356
Length = 1218
Score = 29.5 bits (63), Expect = 4.9
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 101 QDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKD 160
Q++D G G KV+ C +E + G T +I GP I ++ H+ N L+ K
Sbjct: 368 QNLDSGPGMSKVYHCNVE---IRGGTVVKIFKGPYI---ENRRTHLQKVLGDDNVLVVKF 421
Query: 161 IRCKDDVYTHLYTLI 175
+ D T L T +
Sbjct: 422 MEISSDTETDLSTYL 436
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.139 0.440
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,331,686
Number of Sequences: 37544
Number of extensions: 485680
Number of successful extensions: 719
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 672
Number of HSP's gapped (non-prelim): 14
length of query: 398
length of database: 14,793,348
effective HSP length: 84
effective length of query: 314
effective length of database: 11,639,652
effective search space: 3654850728
effective search space used: 3654850728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -