Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000475-TA|BGIBMGA000475-
PA|IPR001580|Calreticulin/calnexin, IPR008985|Concanavalin A-like
lectin/glucanase, IPR000886|Endoplasmic reticulum targeting sequence,
IPR009169|Calreticulin
(398 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 402 e-112
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 402 e-112
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 116 2e-26
Z75714-2|CAB00059.1| 474|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical pr... 30 2.5
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 30 2.5
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 30 2.5
AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome r... 29 7.6
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 402 bits (991), Expect = e-112
Identities = 188/341 (55%), Positives = 229/341 (67%), Gaps = 4/341 (1%)
Query: 17 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 76
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY+
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71
Query: 77 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPD 135
+ KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFGPD
Sbjct: 72 RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPD 131
Query: 136 ICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGD 195
ICGP T++VHVI +YKG+N LIKK+I CK D THLYTLI+ DNTYEV ID E ++G
Sbjct: 132 ICGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGS 190
Query: 196 LEADWDFLPPKKIKDPEAKKPEDWXXXXXXXXXXXXXXXXXXXXXHIPDPDATKXXXXXX 255
LE DWD LP KKIKDP+AKKPEDW HIPDPDA K
Sbjct: 191 LEEDWDLLPAKKIKDPDAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDWDD 250
Query: 256 XXXXXXXXXXIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVG 315
IDNP+YKG W PKQI NPAYKG W+HPEI+NPEYTPD LY + A+G
Sbjct: 251 EMDGEWEPPMIDNPEYKGEWKPKQIKNPAYKGKWIHPEIENPEYTPDDELYSYESWGAIG 310
Query: 316 LDLWQVKSGTIFDDFLITDDPAAAK-ERGEVIKKRQEGEKK 355
DLWQVKSGTIFD+ +ITD A+ E K + EK+
Sbjct: 311 FDLWQVKSGTIFDNIIITDSVEEAEAHAAETFDKLKTVEKE 351
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 402 bits (991), Expect = e-112
Identities = 188/341 (55%), Positives = 229/341 (67%), Gaps = 4/341 (1%)
Query: 17 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 76
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY+
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71
Query: 77 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPD 135
+ KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFGPD
Sbjct: 72 RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPD 131
Query: 136 ICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGD 195
ICGP T++VHVI +YKG+N LIKK+I CK D THLYTLI+ DNTYEV ID E ++G
Sbjct: 132 ICGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGS 190
Query: 196 LEADWDFLPPKKIKDPEAKKPEDWXXXXXXXXXXXXXXXXXXXXXHIPDPDATKXXXXXX 255
LE DWD LP KKIKDP+AKKPEDW HIPDPDA K
Sbjct: 191 LEEDWDLLPAKKIKDPDAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDWDD 250
Query: 256 XXXXXXXXXXIDNPDYKGVWAPKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVG 315
IDNP+YKG W PKQI NPAYKG W+HPEI+NPEYTPD LY + A+G
Sbjct: 251 EMDGEWEPPMIDNPEYKGEWKPKQIKNPAYKGKWIHPEIENPEYTPDDELYSYESWGAIG 310
Query: 316 LDLWQVKSGTIFDDFLITDDPAAAK-ERGEVIKKRQEGEKK 355
DLWQVKSGTIFD+ +ITD A+ E K + EK+
Sbjct: 311 FDLWQVKSGTIFDNIIITDSVEEAEAHAAETFDKLKTVEKE 351
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 116 bits (280), Expect = 2e-26
Identities = 100/349 (28%), Positives = 143/349 (40%), Gaps = 59/349 (16%)
Query: 61 EDDKGLKTSEDARFYALSRKFK-PFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFD--CKL 117
E D GL AR +A++ K PF+ + VVQ+ +K E+ +CGGGYLK+ +
Sbjct: 107 EGDLGLIVKTKARHHAIAAKLNTPFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEK 166
Query: 118 EQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCK----------DDV 167
+ + +T Y IMFGPD CG T KVH+IF YK + + DD
Sbjct: 167 DLANFQDKTAYTIMFGPDKCG-ATGKVHLIFRYKNPINGTISEYHANQPTTIGSTYWDDH 225
Query: 168 YTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWD--FLPPKKIKDPEAKKPEDWXXXXXX 225
THL+TL+VKP Y V +D + + G++ +D PPK+I D KP DW
Sbjct: 226 NTHLFTLVVKPTGEYSVSVDGKSLYYGNMMSDVTPALTPPKQIFDETDLKPVDWDERENI 285
Query: 226 XXXXXX--XXXXXXXXXHIPDPDATKXXXXXXXXXXXXXXXXIDNP-----DYKGVWAPK 278
+ D ATK P D G W
Sbjct: 286 EDESAVKPDDWDENEPQSVVDEAATKPYDWNEEENELIADPEAKKPQDWDEDMDGSWEAP 345
Query: 279 QIDNPA-------------------YKGPWVHPE--------------IDNPEYTPDSNL 305
IDNPA YKG W+ P+ IDNP Y
Sbjct: 346 LIDNPACKGLSGCGTWKAPTIKNPKYKGKWIRPKISNPAFKGKWTARLIDNPNYFEPKPF 405
Query: 306 YKRDEICAVGLDLWQVKSGTIFDDFLIT---DDPAAAKERGEVIKKRQE 351
I AVG+++W + +FD+ LIT +D + ++ +K+++E
Sbjct: 406 AGLAPITAVGIEMWTMSENILFDNILITSSEEDSSDVAKQTFYVKQKEE 454
>Z75714-2|CAB00059.1| 474|Caenorhabditis elegans Hypothetical
protein ZC434.3 protein.
Length = 474
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 187 DNEKVESGDLEADWDFLPPKKIKDPEAKK 215
D K++S D++ DW + P + + PE KK
Sbjct: 426 DFRKIDSDDVKPDWPYAPGSRRRAPEKKK 454
>Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical
protein F54C9.9 protein.
Length = 740
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 61 EDDKGLKTSED-ARFYALSRKFKPFSNEGKPLVVQFTV--KHEQDIDCGGGYLKVFDCKL 117
+DDK + S+ R Y L++ ++P NE P + E+D+D Y F+ +
Sbjct: 229 KDDKNMDESDKFLRDYLLNKDYEPGENEENPTYEDIVALEEDEKDLDSNRKYEHKFNFRF 288
Query: 118 EQKD 121
E D
Sbjct: 289 EDPD 292
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 153 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNEKVES 193
K I+K++ C+D THL L D+TY V ++ NE+V++
Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDN 12895
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 153 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNEKVES 193
K I+K++ C+D THL L D+TY V ++ NE+V++
Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDN 12895
>AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 8 protein.
Length = 362
Score = 28.7 bits (61), Expect = 7.6
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 292 PEIDNPEYTPDSNLYKRDEICAV---GLDLWQVKSGTIFDDFLITDDPAAAKERGEVIKK 348
P++ +P+Y N+ D++ V L V + D+ + +E GE KK
Sbjct: 271 PDVTHPDYIVSQNVQTNDQLMCVYMGSLVRSVVALHNLIDNKISLQKAEKEQETGEAEKK 330
Query: 349 RQEGEKK 355
+ E +KK
Sbjct: 331 KDEKDKK 337
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.139 0.440
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,748,152
Number of Sequences: 27539
Number of extensions: 436775
Number of successful extensions: 662
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 610
Number of HSP's gapped (non-prelim): 29
length of query: 398
length of database: 12,573,161
effective HSP length: 83
effective length of query: 315
effective length of database: 10,287,424
effective search space: 3240538560
effective search space used: 3240538560
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)
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