GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000473-TA|BGIBMGA000473-PA|IPR004859|Putative 5-3
exonuclease
         (1120 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.        31   0.17 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    27   3.6  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    26   4.8  
AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.          25   8.4  
AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.          25   8.4  
AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.          25   8.4  
AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    25   8.4  

>DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.
          Length = 304

 Score = 31.1 bits (67), Expect = 0.17
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 988  GSEALEPEEMKALADNIDKQLEILNANERKITMQVKWNLLYKAELHAGEVSPDRAADYRL 1047
            G+  +E  E K + +N+D   ++++A        + W  +YK   +    S  RAA Y +
Sbjct: 44   GANVVEEREAKHILNNLDILFQMISARAINALHHIDW--VYKHTNNCKIESASRAACYSV 101

Query: 1048 YDRVVCVAR 1056
             D+V+   R
Sbjct: 102  VDKVLASRR 110


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 999  ALADNIDKQLEILNANERKITMQVKWNLLYKAE 1031
            AL  N  K L+ L + E KI   + W LL+ AE
Sbjct: 99   ALMHNRVKDLQALGSAETKILYTLHWILLFAAE 131


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
            protein.
          Length = 505

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 12/40 (30%), Positives = 22/40 (55%)

Query: 1013 ANERKITMQVKWNLLYKAELHAGEVSPDRAADYRLYDRVV 1052
            AN   I  +V+  +L K +LH G+++ D   +    D+V+
Sbjct: 327  ANNPDIQERVRAEMLEKLQLHDGKITYDALKEMTYLDQVI 366


>AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 9/40 (22%), Positives = 25/40 (62%)

Query: 674 LYTTVQNSGNLHKQWLGERNTIIEHNMNRLGIELGDVNII 713
           L+++  ++ NLH  +  ERN ++  +++  G+E  ++ ++
Sbjct: 90  LFSSNSDNQNLHTTFTVERNKLVRLSLDNAGLERLELTLL 129


>AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 9/40 (22%), Positives = 25/40 (62%)

Query: 674 LYTTVQNSGNLHKQWLGERNTIIEHNMNRLGIELGDVNII 713
           L+++  ++ NLH  +  ERN ++  +++  G+E  ++ ++
Sbjct: 90  LFSSNSDNQNLHTTFTVERNKLVRLSLDNAGLERLELTLL 129


>AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 9/40 (22%), Positives = 25/40 (62%)

Query: 674 LYTTVQNSGNLHKQWLGERNTIIEHNMNRLGIELGDVNII 713
           L+++  ++ NLH  +  ERN ++  +++  G+E  ++ ++
Sbjct: 90  LFSSNSDNQNLHTTFTVERNKLVRLSLDNAGLERLELTLL 129


>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 89  HETPGEGEHKIMDYIRWARSQPDYDPNTRHCLYGLD 124
           ++T G  E  I  Y   A    DY   TR CL  L+
Sbjct: 91  NDTTGLREATIRQYYEPAPEDQDYQNRTRSCLAALE 126


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.136    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,153,426
Number of Sequences: 2123
Number of extensions: 47770
Number of successful extensions: 126
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 119
Number of HSP's gapped (non-prelim): 8
length of query: 1120
length of database: 516,269
effective HSP length: 71
effective length of query: 1049
effective length of database: 365,536
effective search space: 383447264
effective search space used: 383447264
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)