Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000472-TA|BGIBMGA000472-PA|IPR003439|ABC transporter
related
(590 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 79 2e-15
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 62 2e-10
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 60 1e-09
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 54 7e-08
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 50 7e-07
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 48 5e-06
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 46 2e-05
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 39 0.002
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 37 0.009
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 33 0.11
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 32 0.19
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 32 0.19
SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces pom... 32 0.26
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 31 0.45
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 31 0.59
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 30 0.78
SPBC1105.05 |exg1||glucan 1,3-beta-glucosidase I/II precursor|Sc... 30 1.0
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 29 1.4
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 29 1.8
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 29 2.4
SPBC1A4.02c |leu1|SPBC1E8.07c|3-isopropylmalate dehydrogenase Le... 27 7.3
SPAC823.13c |||mitochondrial inner membrane protein|Schizosaccha... 27 9.6
SPBC4.02c |||conserved fungal protein|Schizosaccharomyces pombe|... 27 9.6
SPBP8B7.12c |fta3|sma3|Sim4 and Mal2 associated |Schizosaccharom... 27 9.6
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 79.0 bits (186), Expect = 2e-15
Identities = 69/233 (29%), Positives = 118/233 (50%), Gaps = 25/233 (10%)
Query: 48 GEVTAILGSKGSGKRALLDVIARRVPS---KGHVLLEGVPL-----------EEEQFNIN 93
G++TA++G G+GK LL+V+A+RV + G +L+ G L +++ +I
Sbjct: 911 GKLTALMGESGAGKTTLLNVLAQRVDTGVVTGDMLVNGRGLDSTFQRRTGYVQQQDVHIG 970
Query: 94 CALVRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKCVTNLTKSE 153
+ VR + R +++Q ++ L++ Y++ S +K + + + + L +
Sbjct: 971 ESTVREALRF--SAALRQPASVPLSEKYEYVE-SVIKLLEMESYAEAIIGTPGSGLNVEQ 1027
Query: 154 YRRLVIGVQLIRDPIILL-LDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSD 212
+R IGV+L P +LL LDEPT LD + + ++ L A G AI+ T+ +P +
Sbjct: 1028 RKRATIGVELAAKPALLLFLDEPTSGLDSQSAWSIVCFLRKLADA-GQAILCTIHQPSAV 1086
Query: 213 VFPFLDRVVYLCL-GDVVYAGP----TRNLLDYFGSIG-FPCPQLENPLMYYL 259
+F DR++ L G VY G ++ LL+YF S G CP NP Y L
Sbjct: 1087 LFDQFDRLLLLQKGGKTVYFGDIGEHSKTLLNYFESHGAVHCPDDGNPAEYIL 1139
Score = 50.0 bits (114), Expect = 9e-07
Identities = 31/137 (22%), Positives = 53/137 (38%)
Query: 139 SQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKY 198
++V N V ++ E +R+ I P I D T LD + +++L A +
Sbjct: 299 TKVGNDFVRGVSGGERKRVTISEGFATRPTIACWDNSTRGLDSSTAFEFVNVLRTCANEL 358
Query: 199 GTAIILTMEKPRSDVFPFLDRVVYLCLGDVVYAGPTRNLLDYFGSIGFPCPQLENPLMYY 258
+T + ++ DR+ L G +Y GP YF +GF C E +
Sbjct: 359 KMTSFVTAYQASEKIYKLFDRICVLYAGRQIYYGPADKAKQYFLDMGFDCHPRETTPDFL 418
Query: 259 LCLSTVDRRSRERFIES 275
+S R + E+
Sbjct: 419 TAISDPKARFPRKGFEN 435
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 62.5 bits (145), Expect = 2e-10
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPS---KGHVLLEGVPLEEEQFNIN 93
IL +VS +TA+LG SGK LL ++++R + +G + L G+ +
Sbjct: 776 ILTNVSGYLKKNTLTALLGENKSGKSVLLRILSQRGIAGSVEGEITLSGLK-NPKNLRKR 834
Query: 94 CALVRHSTRLLPGLSVQQTLALSLTKISGYLKS-----SKVKQVMADMALSQVANKCVTN 148
VR + + +V++TL L +S + V+ V+ + L +VA+ V +
Sbjct: 835 IGYVRKNPLFISEYTVRETLRLHAALRQSKQRSLSEQYAYVEYVIDFLGLGEVADFIVGD 894
Query: 149 LTK--SEY--RRLVIGVQLIRDP-IILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAII 203
+ K S Y R L I V+L P ILLLDEP LD + ++++ IL A+ G +I+
Sbjct: 895 MGKGLSLYHKRLLSIAVELSARPGSILLLDEPANGLDSQSAWMLVCILQKLARS-GLSIL 953
Query: 204 LTMEKPRSDVFPFLDRVVYLCL-GDVVY 230
++ +P S + D ++ L L G+ VY
Sbjct: 954 CSVSQPSSRILELFDMMLILDLNGNTVY 981
Score = 44.4 bits (100), Expect = 4e-05
Identities = 21/80 (26%), Positives = 38/80 (47%)
Query: 167 PIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVYLCLG 226
P+I D D D ++ ++S + + K GT ++ + + +F D V + G
Sbjct: 237 PLIQCWDNNMRDFDSISVIDILSRIKVLSHKLGTTLVAIVSQASDRIFHMFDMVTLMYEG 296
Query: 227 DVVYAGPTRNLLDYFGSIGF 246
+ ++ GPT L YF +GF
Sbjct: 297 EQIFYGPTSRLKPYFLDLGF 316
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 59.7 bits (138), Expect = 1e-09
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 36 VILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRV-PSKGHVLLEGVPLEEEQFNINC 94
++L + S SG++TA++G+ GSGK ++ ++ R P G V L+G L +N
Sbjct: 436 LVLDNFSLVCPSGKITALVGASGSGKSTIIGLVERFYDPIGGQVFLDGKDLR----TLNV 491
Query: 95 ALVRHSTRLL---PGL---SVQQTLALSLTK-ISGYLKSSKVKQVMADMA--------LS 139
A +R+ L+ P L +V + + L I G L ++++ + D A +
Sbjct: 492 ASLRNQISLVQQEPVLFATTVFENITYGLPDTIKGTLSKEELERRVYDAAKLANAYDFIM 551
Query: 140 QVANKCVTN-------LTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILS 192
+ + TN ++ + +R+ I +I DP ILLLDE T LD + LV L
Sbjct: 552 TLPEQFSTNVGQRGFLMSGGQKQRIAIARAVISDPKILLLDEATSALDSKSEVLVQKALD 611
Query: 193 NAAKKYGTAIILTMEKPRSDVFPFLDRVVYLCLGDVVYAGPTRNLLDYFGS 243
NA++ T +I R D +V + G +V G LLD G+
Sbjct: 612 NASRSRTTIVI----AHRLSTIRNADNIVVVNAGKIVEQGSHNELLDLNGA 658
Score = 52.0 bits (119), Expect = 2e-07
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 18/182 (9%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVP-SKGHVLLEGVPLEEEQFNIN-- 93
+L+ ++ T G+ A +GS G GK + +I R G VL++GV + + +NIN
Sbjct: 1136 VLRGLNLTVKPGQFVAFVGSSGCGKSTTIGLIERFYDCDNGAVLVDGVNVRD--YNINDY 1193
Query: 94 ---CALVRHSTRLLPGLSVQQTLALSLTK------ISGYLKSSKVKQVMADM--ALSQVA 142
ALV L G +V++ + L +K + K + + + + + + +
Sbjct: 1194 RKQIALVSQEPTLYQG-TVRENIVLGASKDVSEEEMIEACKKANIHEFILGLPNGYNTLC 1252
Query: 143 NKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAI 202
+ ++L+ + +R+ I LIR+P ILLLDE T LD + +V L NAA + T +
Sbjct: 1253 GQKGSSLSGGQKQRIAIARALIRNPKILLLDEATSALDSHSEKVVQEAL-NAASQGRTTV 1311
Query: 203 IL 204
+
Sbjct: 1312 AI 1313
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 53.6 bits (123), Expect = 7e-08
Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 9/176 (5%)
Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRV-PSKGHVLLEGVPLEEEQFNINCAL 96
L +VS GE+ I+G GSGK + ++ R P+ G++ L+ PLEE ++ +
Sbjct: 452 LINVSVFIPFGELVHIIGPSGSGKSTFISLLLRYFSPTYGNIYLDDFPLEEIDEHVLGST 511
Query: 97 VRHSTR--LLPGLSVQQTLALSLTKISGYLKSSKVKQVMAD-MALS---QVANKCV-TNL 149
+ + ++ +++++ + + S + + D AL+ C +L
Sbjct: 512 ITLVCQQPVIFDMTIRENIIMRNENASESDFEEVCRLALVDEFALTFDQSYDTPCKEASL 571
Query: 150 TKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILT 205
+ + +R+ + L+RD IL+LDEPT LDP+ LV+ + A +K T +++T
Sbjct: 572 SGGQQQRIALARALLRDTEILILDEPTSALDPITKNLVMDAI-RAHRKGKTTLVIT 626
Score = 53.6 bits (123), Expect = 7e-08
Identities = 51/211 (24%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPLEEEQFN---INC 94
L +VS + + E AI+G GSGK L++++ + PS+ + ++G PL N
Sbjct: 1118 LNNVSLSIEAREKVAIVGISGSGKSTLVELLRKTYPSE-DIYIDGYPLTNIDTNWLLKKV 1176
Query: 95 ALVRHSTRLLPGLSVQQTLAL----SLTKISGYLKSSKVKQVMADM--ALSQVANKCVTN 148
A+V LL G ++ ++L + + L + + +V+ ++ L + N
Sbjct: 1177 AIVDQKPHLL-GSTILESLLYGVDRDINSVMDALDKTYMTEVIQNLPNGLDTPLLEFSKN 1235
Query: 149 LTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEK 208
+ + +RL L+R+P +L+LDE T LD ++ L+ + N + T +I+T +
Sbjct: 1236 FSGGQIQRLAFARALLRNPRLLILDECTSALDSKSSLLLEKTIQNLS---CTVLIITHQ- 1291
Query: 209 PRSDVFPFLDRVVYLCLGDVVYAGPTRNLLD 239
+ DR++ + G V +G L++
Sbjct: 1292 --PSLMKLADRIIVMDSGIVKESGSFDELMN 1320
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 50.4 bits (115), Expect = 7e-07
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 126 SSKVKQVMADMALSQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTY 185
S V++ + LS + + NL+ + RR ++ +L++ P +LLLDEP LD +
Sbjct: 126 SQHVQEAASMTQLSHLLPSSLINLSNGQSRRAMLASKLVQRPQLLLLDEPYAGLDVTSRS 185
Query: 186 LVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVYLCLGDVVYAGP 233
++ S+L + I+L++ +P+ + F+ V+ L + Y GP
Sbjct: 186 VLSSLLGEMSNHCSPKIVLSL-RPQDKIPDFITHVLELKNKKITYQGP 232
Score = 35.9 bits (79), Expect = 0.016
Identities = 35/185 (18%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVP----------SKGHVLLEGVPLE 86
+L D+++T GE A+ GS GSGK LL + P K G+ +
Sbjct: 279 VLSDINWTIREGERWALTGSNGSGKTTLLAYVVGDHPKLFASNIKFFGKSIGPGTGISIF 338
Query: 87 EEQFNI-NCALVRHS-----TRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMADMALSQ 140
+ Q NI +C+ H+ L + ++ K++ + + + ++ + L
Sbjct: 339 DIQENIGHCSPEIHNHFPKQHTCFEALLSAWSTTFTIPKLT-ETRLAAISSILEEFELKD 397
Query: 141 VANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGT 200
+ +K +++++ R ++ +++ P +++LDEP +D ++ + L+
Sbjct: 398 IKDKPLSSISVGMQRFILFCRAIVKQPRLVVLDEPFQGVDTKYVHMAHNYLNEKLSPSQA 457
Query: 201 AIILT 205
+I++
Sbjct: 458 MVIIS 462
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 47.6 bits (108), Expect = 5e-06
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIAR-RVPSKGHVLLEGVPLEE---EQFNI 92
I ++SF H G AI+ G GK + ++ R PS G +L +GV + Q+
Sbjct: 499 IFDNLSFDIHPGTNVAIVAPSGGGKSTISQLLLRFYAPSSGKILADGVDISTYNVHQWRS 558
Query: 93 NCALVRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMADMALS-------QVANKC 145
+ LV L G ++ + +A + S K+ LS QV +
Sbjct: 559 HFGLVGQEPVLFSG-TIGENIAYGKSNASQEEIEDAAKRANCSFVLSFPEKWSTQVGTRG 617
Query: 146 VTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLD 180
+ L+ + +R+ I L+R+P L+LDE T LD
Sbjct: 618 L-QLSGGQKQRIAIARALLRNPAFLILDEATSALD 651
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 45.6 bits (103), Expect = 2e-05
Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 24/217 (11%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVP-SKGHVLLEGVPLEEEQFNINCA 95
+L D++F G+V A++G G GK ++ ++ R + G + ++ +++ N+ +
Sbjct: 599 VLSDINFVAQPGKVIALVGESGGGKSTIMRILLRFFDVNSGSITID----DQDIRNVTLS 654
Query: 96 LVRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKCVT-------- 147
+R S ++P S + L I S+ +++ A +Q+ ++ +
Sbjct: 655 SLRSSIGVVPQDSTLFNDTI-LYNIKYAKPSATNEEIYAAAKAAQIHDRILQFPDGYNSR 713
Query: 148 ------NLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTA 201
L+ E +R+ + +++DP I+LLDE T LD NT I N TA
Sbjct: 714 VGERGLKLSGGEKQRVAVARAILKDPSIILLDEATSALD-TNTERQIQAALNRLASGRTA 772
Query: 202 IILTMEKPRSDVFPFLDRVVYLCLGDVVYAGPTRNLL 238
I++ R D ++ + G +V G L+
Sbjct: 773 IVIA---HRLSTITNADLILCISNGRIVETGTHEELI 806
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 38.7 bits (86), Expect = 0.002
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 33 KTGVILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSK-GHVLLEGV-PLEEEQF 90
K + L V+ G T ++G+ G+GK LL +++ + +K GH+ + G P E
Sbjct: 15 KQPLSLDHVTLDLPKGSRTLLVGANGAGKSTLLKLLSGKSLAKAGHISVGGKDPFRES-- 72
Query: 91 NINCALVRHSTRLL--PGLSVQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKCVTN 148
+ A V T + P + ++A + + G K ++ + + + + + +
Sbjct: 73 --SSAFVYLGTEWVNNPVIHRDMSVARLIASVGGD-KFAERRDFLISILDIDLRWR-MHA 128
Query: 149 LTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEK 208
++ E RR+ + + L+R +LLLDE T DLD L +++ L + I+
Sbjct: 129 VSDGERRRVQLCMGLLRPFEVLLLDEVTVDLDVLARADLLNFLQEETEVRNATIVYATH- 187
Query: 209 PRSDVFPFLDRVVYLCLGDVVYAGP 233
+ + +V+L LG +V GP
Sbjct: 188 IFDGLAEWPTHLVHLSLGRIVDYGP 212
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 36.7 bits (81), Expect = 0.009
Identities = 47/219 (21%), Positives = 96/219 (43%), Gaps = 15/219 (6%)
Query: 36 VILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRV-PSKGHVLLEGVPLEE---EQFN 91
++L D+S E I+G G+GK L + R + P+ G + L+ + +
Sbjct: 1239 LVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALFRLIEPTSGDIQLDDINITSIGLHDLR 1298
Query: 92 INCALVRHSTRLLPGLSVQQTLALSLT----KISGYLKSSKVKQVM--ADMALSQVANKC 145
A++ + G ++++ L + +I L+++ +KQ + D L +
Sbjct: 1299 SRLAIIPQENQAFEG-TIRENLDPNANATDEEIWHALEAASLKQFIQTLDGGLYSRVTEG 1357
Query: 146 VTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILT 205
NL+ + + + + L+ +LLLDE T +D + T ++ +++ ILT
Sbjct: 1358 GANLSSGQRQLMCLTRALLTPTRVLLLDEATAAVD-VETDAIVQ--RTIRERFNDRTILT 1414
Query: 206 MEKPRSDVFPFLDRVVYLCLGDVVYAGPTRNLLDYFGSI 244
+ R + +R++ L G VV T+ LL+ S+
Sbjct: 1415 IAH-RINTVMDSNRILVLDHGKVVEFDSTKKLLENKASL 1452
Score = 31.9 bits (69), Expect = 0.26
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 18 QVEPGSFFQRLTGGVKTGVILKDVSFTTHSGEVTAILGSKGSGKRALLD 66
+++ G+F G L+D+ F GE+ I+G G GK +LL+
Sbjct: 579 EIKKGTFSWSGPGQNAAEPTLRDIDFVARRGELCCIVGKVGMGKSSLLE 627
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 33.1 bits (72), Expect = 0.11
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 12/148 (8%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVI-ARRVPSKGHV-LLEGVPLEEEQFNINC 94
+ +D+SF AI+G G+GK LL++I +P +G+V G+ + +
Sbjct: 405 LYRDLSFGIDMDSRVAIVGKNGTGKSTLLNLITGLLIPIEGNVSRYSGLKMAKYS----- 459
Query: 95 ALVRHSTRLLP-GLSVQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKC-VTNLTKS 152
+HS LP S + + + + + + V+ LS + + L+
Sbjct: 460 ---QHSADQLPYDKSPLEYIMDTYKPKFPERELQQWRSVLGKFGLSGLHQTSEIRTLSDG 516
Query: 153 EYRRLVIGVQLIRDPIILLLDEPTWDLD 180
R+V + P ILLLDEPT LD
Sbjct: 517 LKSRVVFAALALEQPHILLLDEPTNHLD 544
Score = 29.1 bits (62), Expect = 1.8
Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 23/189 (12%)
Query: 36 VILKDVSFTTHSGEVTAILGSKGSGKRALLD-VIARRVPSKGHVLLEGVPLEEEQFNINC 94
+++++ + + G+ +LG GSGK L+ V AR V H+ + E E ++N
Sbjct: 89 LLIENATIELNHGQRYGLLGDNGSGKSTFLESVAARDVEYPEHIDSYLLNAEAEPSDVNA 148
Query: 95 A--LVRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQV----------MADMAL---- 138
+++ + + L + + + L SK +++ A M L
Sbjct: 149 VDYIIQSAKDKVQKLEAEIEELSTADDVDDVLLESKYEELDDMDPSTFEAKAAMILHGLG 208
Query: 139 --SQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAK 196
++ K +++ R+ + L P +LLLDEPT LD + L N
Sbjct: 209 FTQEMMAKPTKDMSGGWRMRVALSRALFIKPSLLLLDEPTNHLD----LEAVVWLENYLA 264
Query: 197 KYGTAIILT 205
KY +++T
Sbjct: 265 KYDKILVVT 273
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 32.3 bits (70), Expect = 0.19
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 18 QVEPGSF-FQRLTGGVKTGVILKDVSFTTHSGEVTAILGSKGSGKRALLD 66
+++ G+F + + T + L+ ++F +GE+T I G G+GK +LL+
Sbjct: 576 EIKSGTFSWSKKTLKQQVTPTLRQINFVAKNGELTCIFGKVGAGKSSLLE 625
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 32.3 bits (70), Expect = 0.19
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 129 VKQVMADMALSQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVI 188
VK + + ++ N + +L+ +L + + ++P ILLLDEPT LD +N +
Sbjct: 529 VKALKENSFTDELINMPIGSLSGGWKMKLALTRAMFKNPDILLLDEPTNHLDVVNVAWLE 588
Query: 189 SILSN 193
+ L N
Sbjct: 589 NFLVN 593
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRALLDVI-ARRVPSKGHV 78
L D+SF A++G G+GK L+ V+ +P+ G +
Sbjct: 690 LNDISFQVSLSSRIAVIGPNGAGKSTLIKVLTGELLPTVGEI 731
>SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 31.9 bits (69), Expect = 0.26
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 148 NLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAII 203
+L K EY R V IR+ + DEP W + N++L+ I + ++G AI+
Sbjct: 420 HLRKGEYSRFPYSVLEIRECVRYDEDEPLWISELRNSHLISEIDGFSKYEHGVAIL 475
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 31.1 bits (67), Expect = 0.45
Identities = 50/215 (23%), Positives = 87/215 (40%), Gaps = 24/215 (11%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRAL-LDVIARRVPSKGHVLLEGVPLEEEQFNINCA 95
ILKDV+ + E A++G GSGK L L ++ G + + G E + N+N
Sbjct: 1228 ILKDVNLHINPSEKVAVVGRTGSGKSTLGLTLLRFTHRISGEIYING--RETQSVNLNAL 1285
Query: 96 LVRHS----TRLLPGLSVQQTL-------------ALSLTKISGYLKSSKVKQVMADMAL 138
R S +L +V+ L AL + S + + Q + L
Sbjct: 1286 RQRISFIPQDPILFSGTVRSNLDPFDELEDNFLNEALKTSGASSMIMAHTDDQKPIHITL 1345
Query: 139 SQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKY 198
+N ++ + + L + ++R I++LDE T +D + L A +
Sbjct: 1346 DTHVASEGSNFSQGQKQVLALARAIVRRSKIIILDECTASVDDAMDQKIQKTLREA---F 1402
Query: 199 GTAIILTMEKPRSDVFPFLDRVVYLCLGDVVYAGP 233
G A +L + + + D+V+ L G +V GP
Sbjct: 1403 GDATMLCIAHRLKTIVDY-DKVMVLDKGVLVEYGP 1436
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 30.7 bits (66), Expect = 0.59
Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 18/153 (11%)
Query: 36 VILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPLEEEQFNINCA 95
++L + + G ++G G GK LL I G +E P +E +
Sbjct: 458 LLLSHTNLHLYRGHRYGVVGHNGCGKSTLLRAI-------GDYKVENFPSPDE---VKTC 507
Query: 96 LVRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMADMALS-----QVANKCVTNLT 150
V HS L G + + + L + +Q AD S ++ V +L+
Sbjct: 508 FVAHS---LQGEDTSMAILDFVAQDKALLTMNVTRQEAADALHSVGFTAEMQENPVASLS 564
Query: 151 KSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLN 183
+L + +++ ILLLDEPT LD N
Sbjct: 565 GGWKMKLELARAMLQKADILLLDEPTNHLDVAN 597
Score = 26.6 bits (56), Expect = 9.6
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 146 VTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLD 180
+++L+ + ++VI L +P +L+LDEPT LD
Sbjct: 908 ISSLSGGQKVKVVIAACLWNNPQLLVLDEPTNFLD 942
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 30.3 bits (65), Expect = 0.78
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 17 GQVEPGSFFQRLTGGVKTG-VILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRV-PS 74
G P FQ ++ G I ++F A++G G+GK L+ +I +V PS
Sbjct: 588 GIPSPAIKFQDVSFNYPGGPTIFSKLNFGLDLKSRVALVGPNGAGKTTLIKLILEKVQPS 647
Query: 75 KGHVLLEGVPLEEEQFNINCALVRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMA 134
G V+ L FN + +L LS + L TK G ++++++
Sbjct: 648 TGSVVRHH-GLRLALFNQHMG-----DQLDMRLSAVEWLR---TKF-GNKPEGEMRRIVG 697
Query: 135 DMALSQVANKC-VTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLD 180
L+ + + L+ + RR++ + P ILLLDEPT LD
Sbjct: 698 RYGLTGKSQVIPMGQLSDGQRRRVLFAFLGMTQPHILLLDEPTNALD 744
>SPBC1105.05 |exg1||glucan 1,3-beta-glucosidase I/II
precursor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 407
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 138 LSQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNA 194
++ VANK T+S+Y +VIG++ + +P+ LD L+ Y +++ LS++
Sbjct: 189 ITYVANK----YTQSQYASVVIGIETVNEPLGYGLDMDQLKQYDLDAYNIVNPLSSS 241
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 115 LSLTKI-SGYLKSSKVKQVMADMALSQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLD 173
L L KI + +L +V +++ + ++ V NL+ E +R+ I + L + L+D
Sbjct: 421 LFLKKIRAAFLNGKFQSEVCKPLSIDNIIDQEVLNLSGGELQRVAICLALGMPADVYLID 480
Query: 174 EPTWDLD 180
EP+ LD
Sbjct: 481 EPSAYLD 487
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 29.1 bits (62), Expect = 1.8
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 29/222 (13%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRAL-LDVIARRVPSKGHVLLEGVPLEEEQFNINCA 95
+L+D++ E AI+G GSGK + L ++ + G V ++G+ + +++
Sbjct: 1196 VLEDINLEILPKEKIAIVGRTGSGKSTMGLTLLRFTMIMSGAVEVDGIDIN----SLDLE 1251
Query: 96 LVRHSTRLLPG--LSVQQTLALSLTKISGYLKS--SKVKQVMADMALSQVANKCV----- 146
++R L+P + + T+ +L Y +++ + + +L Q +NK
Sbjct: 1252 VLRQRISLIPQDPVLISGTVRSNLDPFEEYGDGELNEILKTASCESLVQASNKNSLDAFA 1311
Query: 147 -----------TNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAA 195
N + + + L + L+R I++LDE T +D + +L AA
Sbjct: 1312 IHLDTPVDSGGVNFSSGQRQILALARALVRKSRIVILDESTASVDDTTDRRIQQML-RAA 1370
Query: 196 KKYGTAIILTMEKPRSDVFPFLDRVVYLCLGDVVYAGPTRNL 237
K+ T + + R D+V+ L G V G ++L
Sbjct: 1371 FKHATVLCIA---HRIKTIVDYDKVLVLDSGKTVEFGSPKSL 1409
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRAL 64
LK+++FT + T ++GS GSGK L
Sbjct: 597 LKNLNFTIPRNQFTLVVGSTGSGKSTL 623
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 28.7 bits (61), Expect = 2.4
Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 12/168 (7%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPLEEEQFNINCAL 96
ILK V ++G G+GK +L ++ ++ G+ + I
Sbjct: 533 ILKHVDIDVQMDSRIGVVGPNGAGKSTMLKLLIEQLHPTS-----GIVSRHPRLRIAYFA 587
Query: 97 VRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKCVTNLTKSEYRR 156
H L L+ LA + G + + + A +A + + L+ + R
Sbjct: 588 QHHVDTLDLNLNALSFLAKTFP---GKGEEEYRRHLGAFGVSGPLALQKMITLSGGQKSR 644
Query: 157 LVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIIL 204
+ +++P IL+LDEPT LD + + L+ A K++ +IL
Sbjct: 645 VAFACLGLQNPHILILDEPTNHLDMES----MDALTRAVKRFQGGVIL 688
Score = 27.9 bits (59), Expect = 4.2
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 117 LTKISGYLKSSKVKQVMADMALSQVANKCVTNLTKSEYR-RLVIGVQLIRDPIILLLDEP 175
L+++ S+ ++A + +Q T +R RL + L P +LLLDEP
Sbjct: 322 LSEMDSDRAESRAATILAGLGFTQEMQSHATKTFSGGWRMRLSLARALFCQPDLLLLDEP 381
Query: 176 TWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRS 211
+ LD + I+ LS + Y I+L + RS
Sbjct: 382 SNMLDVPS----IAFLSEYLQTYKN-IVLVVSHDRS 412
>SPBC1A4.02c |leu1|SPBC1E8.07c|3-isopropylmalate dehydrogenase
Leu1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 371
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 136 MALSQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEP 175
+A S++ K V + K EY L + QLI +LL+ P
Sbjct: 195 LATSRLWRKTVAKIFKEEYPHLTLKNQLIDSAAMLLVKSP 234
>SPAC823.13c |||mitochondrial inner membrane
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 259 LCLSTVDRRSRERFIESNHQIAALVEKFKIEGQAIMQGNLHENNRIVNPN 308
L VD +ER +E N ++ + EK +G+A+ Q + +I N N
Sbjct: 194 LVREAVDHIDKERELEINDELKKISEKLDKKGEAVGQALELTSPKIDNKN 243
>SPBC4.02c |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 456
Score = 26.6 bits (56), Expect = 9.6
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 437 AAIVNLYITCIYVMLASGVLRSY---KGFEDWLHYL---TYITHTRYASIFLHRTVFKQP 490
A I +LY T +YV +++G+++S G + W +I T + +K+P
Sbjct: 370 ADIPSLYGTILYVSMSTGIVKSEIGDIGAQQWKTLAPSERWILRTNIRKECTYDIRYKRP 429
Query: 491 TFNILPYSDHENCTG 505
+ L YSD + G
Sbjct: 430 YVSSLKYSDDDLTAG 444
>SPBP8B7.12c |fta3|sma3|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 220
Score = 26.6 bits (56), Expect = 9.6
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 103 LLPGL-SVQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKCVTNLTK 151
LLP + S+ +L L +K S Y S ++ V+AD+ L++ + V N+T+
Sbjct: 140 LLPSVQSISSSLELYASKESDY--RSSIEGVLADLKLARARWEIVRNVTQ 187
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.326 0.141 0.427
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,611,776
Number of Sequences: 5004
Number of extensions: 109117
Number of successful extensions: 365
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 310
Number of HSP's gapped (non-prelim): 53
length of query: 590
length of database: 2,362,478
effective HSP length: 77
effective length of query: 513
effective length of database: 1,977,170
effective search space: 1014288210
effective search space used: 1014288210
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 56 (26.6 bits)
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