Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000472-TA|BGIBMGA000472-PA|IPR003439|ABC transporter
related
(590 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26155| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 9e-18
SB_24754| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 87 3e-17
SB_12613| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 2e-12
SB_17270| Best HMM Match : ABC_tran (HMM E-Value=5.1e-08) 69 8e-12
SB_37511| Best HMM Match : ABC_tran (HMM E-Value=0) 65 1e-10
SB_30636| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 1e-09
SB_6133| Best HMM Match : ABC_tran (HMM E-Value=9e-09) 58 2e-08
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 51 2e-06
SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 9e-06
SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0) 49 9e-06
SB_39746| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 4e-05
SB_36627| Best HMM Match : ABC_tran (HMM E-Value=5.4e-06) 47 5e-05
SB_59776| Best HMM Match : ABC_tran (HMM E-Value=0.00016) 46 1e-04
SB_40434| Best HMM Match : ABC2_membrane (HMM E-Value=0.0087) 45 1e-04
SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0) 45 2e-04
SB_15716| Best HMM Match : ABC_tran (HMM E-Value=0) 45 2e-04
SB_59051| Best HMM Match : ABC_tran (HMM E-Value=2.4e-41) 43 8e-04
SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0) 42 0.001
SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0) 40 0.004
SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0) 40 0.007
SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.010
SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0) 38 0.017
SB_20094| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.017
SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0) 38 0.017
SB_37816| Best HMM Match : ABC_tran (HMM E-Value=0.03) 38 0.023
SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.023
SB_32252| Best HMM Match : RVT_1 (HMM E-Value=9.2e-21) 38 0.030
SB_27355| Best HMM Match : ABC_tran (HMM E-Value=1.1e-37) 37 0.040
SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0) 37 0.040
SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0) 37 0.052
SB_40695| Best HMM Match : ABC_tran (HMM E-Value=7.79963e-42) 36 0.069
SB_37300| Best HMM Match : MMR_HSR1 (HMM E-Value=0.061) 36 0.069
SB_52342| Best HMM Match : ABC_tran (HMM E-Value=5.29999e-41) 36 0.091
SB_26620| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.091
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.091
SB_31867| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 36 0.12
SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0) 36 0.12
SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 36 0.12
SB_53189| Best HMM Match : ABC_tran (HMM E-Value=0.021) 35 0.16
SB_25545| Best HMM Match : ABC_tran (HMM E-Value=0.00042) 35 0.21
SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36) 34 0.28
SB_34187| Best HMM Match : ABC_tran (HMM E-Value=1.49995e-41) 34 0.28
SB_56043| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.37
SB_58724| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.49
SB_44672| Best HMM Match : ABC_tran (HMM E-Value=4.2039e-44) 33 0.64
SB_58705| Best HMM Match : ABC_tran (HMM E-Value=5.7e-05) 33 0.85
SB_40697| Best HMM Match : ABC_tran (HMM E-Value=7.1e-07) 32 1.1
SB_10268| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.1
SB_53871| Best HMM Match : ABC_tran (HMM E-Value=1.49939e-42) 32 1.5
SB_7501| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.5
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_49365| Best HMM Match : ABC_tran (HMM E-Value=3.5e-38) 31 2.6
SB_42212| Best HMM Match : ABC_tran (HMM E-Value=0) 31 2.6
SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.6
SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.6
SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42) 31 3.4
SB_34997| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.4
SB_58013| Best HMM Match : ABC_membrane (HMM E-Value=6.3e-28) 31 3.4
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 30 4.5
SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12) 29 7.9
SB_20224| Best HMM Match : ABC_tran (HMM E-Value=2.2e-36) 29 7.9
SB_51493| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00067) 29 7.9
SB_50229| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.9
>SB_26155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 815
Score = 89.0 bits (211), Expect = 9e-18
Identities = 55/190 (28%), Positives = 102/190 (53%), Gaps = 8/190 (4%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIA--RRVPSKGHVLLEGVPLEEEQFNINC 94
I+KDVS SGE+ +LG G+GK L++V+A R + G + + GV QF
Sbjct: 141 IIKDVSGKFKSGELVGVLGPSGAGKSTLINVLAGYRTKFADGSIKVNGVERNLRQFRKMS 200
Query: 95 ALVRHSTRLLPGLSVQQTLALSLT---KISGYL--KSSKVKQVMADMALSQVANKCVTNL 149
+ LLP L+V +++ +S K + L K +K+++ ++ L + A+ ++ +
Sbjct: 201 CYIMQDDVLLPHLTVMESMMVSANLHLKENMPLDDKERLIKEILINLGLLETADTRLSEV 260
Query: 150 TKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKP 209
+ + +R+ I ++LI +P ++ LDEPT LD + Y IS++ A G ++ T+ +P
Sbjct: 261 SGGQRKRVAIALELINNPPLIFLDEPTSGLDSSSAYQCISLMRTLAHG-GRTVVCTIHQP 319
Query: 210 RSDVFPFLDR 219
+ +F D+
Sbjct: 320 SAKLFEMFDK 329
Score = 36.3 bits (80), Expect = 0.069
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 380 PFSEIF-IVYCKFLRSRILADISESLDYIHFSLVLWSSYIYAEQQAIAIMV-FVKNGLNA 437
PF +F ++YC + + E L Y F + + + A Q+I +++ V L
Sbjct: 639 PFQILFPLIYCTIVYF-MTEQPHEGLRYTQFVAITILTCLVA--QSIGLLIGTVAPSLPT 695
Query: 438 AIVNLYITCIYVMLASGVLRSYKGFEDWLHYLTYITHTRYA 478
A+ +T I V+L SG ++ +++ +LTY+++ RY+
Sbjct: 696 AVYVAPVTGIPVLLFSGFFVNFDTIPNYMQWLTYVSYARYS 736
>SB_24754| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 781
Score = 87.4 bits (207), Expect = 3e-17
Identities = 63/248 (25%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 27 RLTGGVKTGVILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRV---PSKGHVLLEGV 83
+L G K V++ V+ SGEVTA++G G+GK L+ ++ + G + + G
Sbjct: 203 KLNSGTKKTVLM-GVTGKIKSGEVTAVMGPSGAGKTTFLNTLSGKAYYGTRGGEIFINGK 261
Query: 84 PLEE-EQFNINCALVRHSTRLLPGLSVQQTLA----LSLTKI-SGYLKSSKVKQVMADMA 137
++ + + V + L+V++ L L L+ I +K ++ Q++ +
Sbjct: 262 KEDDLDMYRTITGFVPQEDVMHRNLTVKEVLRYQAELRLSSIVKKAMKEERIHQIIELLE 321
Query: 138 L-----SQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILS 192
L SQ+ ++ ++ + +R+ IG++L+ DP +L LDEPT LD ++ V++ L
Sbjct: 322 LERIQDSQIGDETNRGISGGQRKRVNIGMELVVDPTLLFLDEPTSGLDSTSSLSVLNALR 381
Query: 193 NAAKKYGTAIILTMEKPRSDVFPFLDRVVYLCLGD-VVYAGPTRNLLDYFGSIGFPCPQL 251
A++ I+ + +PR ++F +++L G V+ G +YF +GF P
Sbjct: 382 AVAERGRLTIVCVIHQPRFEIFRMFHNLLFLGPGGRTVFQGSVDKAEEYFQRLGFEKPLN 441
Query: 252 ENPLMYYL 259
NP +Y+
Sbjct: 442 VNPADFYM 449
>SB_12613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 651
Score = 71.7 bits (168), Expect = 2e-12
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 19/199 (9%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPLEEEQ-----FN 91
IL DV+ T G + AI+G+ G+GK L++V+A R + + + G + E+ N
Sbjct: 209 ILNDVNGTVKPGSLLAIMGASGAGKSTLMNVLAHR--NIADMQVSGTVMVNERKVGLDIN 266
Query: 92 INCALVRHSTRLLPGLSVQQTLA----LSLTK-ISGYLKSSKVKQVMADMALSQVANKCV 146
A V+ + L+V++ L L L K +S + +V Q++ ++ L + A+ +
Sbjct: 267 TISAYVQQEDLFIGKLTVREHLVFQALLRLDKDLSLQERLYRVDQIIGEVGLRRCADTMI 326
Query: 147 ------TNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGT 200
++ E +RL +++ DP IL DEPT LD VI+ L A + G
Sbjct: 327 GIPGRMRGISGGEKKRLSFASEVLTDPAILFADEPTSGLDAFMAQTVITTLQKMAAQ-GR 385
Query: 201 AIILTMEKPRSDVFPFLDR 219
++ T+ +P S+VF DR
Sbjct: 386 TVVCTIHQPSSEVFAMFDR 404
>SB_17270| Best HMM Match : ABC_tran (HMM E-Value=5.1e-08)
Length = 771
Score = 69.3 bits (162), Expect = 8e-12
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 7/159 (4%)
Query: 107 LSVQQTLALSLTKISGYLKSSKVKQVMADMAL-----SQVANKCVTNLTKSEYRRLVIGV 161
L Q L LS + S K +V+Q++ + L SQ+ ++ ++ + +R+ IG+
Sbjct: 266 LRYQAELRLSSSTKSSK-KHERVQQIIELLQLERIQDSQIGDEENRGISGGQRKRVNIGM 324
Query: 162 QLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVV 221
+L+ DP +L LDEPT LD ++ V++ L A+K I+ + +PR ++F ++
Sbjct: 325 ELVVDPTLLFLDEPTSGLDSTSSLSVLNALRAVAEKGRLTIVCVIHQPRFEIFRMFHNLL 384
Query: 222 YLCLGD-VVYAGPTRNLLDYFGSIGFPCPQLENPLMYYL 259
+L G V+ G +YF +GF P NP +Y+
Sbjct: 385 FLGPGGRTVFQGSVDEAEEYFQCLGFEKPLNVNPADFYM 423
>SB_37511| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 884
Score = 65.3 bits (152), Expect = 1e-10
Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 41 VSFTTHSGEVTAILGSKGSGKRALLDVIARRV-PSKGHVLLEGVPLEE----EQFNINCA 95
+S + G++TA+LG G+GK L+ + + PS G L+ G + + N
Sbjct: 515 ISMDIYEGQITALLGHNGAGKSTLIGALTGMIQPSSGTALIYGKDISRFGDLAELRRNIG 574
Query: 96 LVRHSTRLLPGLSVQQTLALSLTKISG--YLKSSKVKQVMADMALSQVANKCVTNLTKSE 153
+ + L+V++ L +G +++ ++ ++ L + + NL+ +
Sbjct: 575 VCPQQDVIFEFLTVKEHLEFYFKLKTGGDSQQNNGADAILKEIGLQEKKDDIAKNLSGGQ 634
Query: 154 YRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDV 213
R+L +G+ L+ DP +L LDEPT +DP + + +L K+ ++ T +D+
Sbjct: 635 KRKLSVGISLVGDPKVLFLDEPTSGMDPHSRREMWKLLQGQCKE-KCVLLTTHFMDEADI 693
Query: 214 FPFLDRVVYLCLGDVVYAGPTRNLLDYFGSIGF 246
D L G + AG + L + FG IG+
Sbjct: 694 --LADYKAILSKGKLRCAGTSLFLKNRFG-IGY 723
>SB_30636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 62.1 bits (144), Expect = 1e-09
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 15/178 (8%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVI-ARRVPSKGHVLLEGVPLEEEQFNIN-- 93
+LK +S GEV ++G GSGK LL + P++G + + G + +I+
Sbjct: 36 VLKGISLDVAPGEVVCLIGPSGSGKSTLLRCVNLLEQPNEGTIHVGGFEATDPDVDIDKM 95
Query: 94 ---CALVRHSTRLLPGLSVQQTLALSLTKISGYLKSSK---VKQVMADMALSQVANKCVT 147
+V L P L+V + L + ++ K++ + + + + + A+K +
Sbjct: 96 RRKVGMVFQQFNLFPHLTVLENLTIGPIRVRKMGKAAAEALARNYLERVHIPEQADKYPS 155
Query: 148 NLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDP------LNTYLVISILSNAAKKYG 199
L+ + +R+ I L DPI +L DEPT LDP L+ ++ ++++ + +YG
Sbjct: 156 QLSGGQQQRVAIARALCMDPIAMLFDEPTSALDPEMINEVLDVMVIFRVITSPSSRYG 213
>SB_6133| Best HMM Match : ABC_tran (HMM E-Value=9e-09)
Length = 562
Score = 58.0 bits (134), Expect = 2e-08
Identities = 42/172 (24%), Positives = 83/172 (48%), Gaps = 7/172 (4%)
Query: 1 MIGGDYTLELCNVFHSGQVEPGSFFQRLTGGVKTGVILKDVSFTTHSGEVTAILGSKGSG 60
++G D+ + N ++ V+ +++ G K V++KDV F GEV +LG G+G
Sbjct: 274 LLGNDFGRQGNNTEYTATVK--GLWKKFGRGKKGKVVVKDVYFGVTPGEVFGLLGPNGAG 331
Query: 61 KRALLDVIARRVP-SKGHVLLEGVPLEEEQFNI--NCALVRHSTRLLPGLSVQQ--TLAL 115
K L+++ +P S+G V + G L+ E + + L +++++ TL
Sbjct: 332 KTTTLNMMTAGIPASRGSVSVAGYDLQTETHKVFQHMGFCPQQDALFDDITLEEHLTLYA 391
Query: 116 SLTKISGYLKSSKVKQVMADMALSQVANKCVTNLTKSEYRRLVIGVQLIRDP 167
S+ + + V M+ M +++ ANK L+ R+L G+ ++ +P
Sbjct: 392 SVRGVPWASIDNVVNHYMSAMKITEHANKRAKELSGGTKRKLSFGMAMLGEP 443
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 51.2 bits (117), Expect = 2e-06
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 10/209 (4%)
Query: 30 GGVKTGVILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARR-VPSKGHVLLE--GVPLE 86
G + V + ++S + G++TA+LG G+GK + ++ P+ G +++ + +
Sbjct: 209 GSTGSKVAVDNLSLNMYKGQITALLGHNGAGKTTTMSILTGLFTPTSGSAMIDNKSILTD 268
Query: 87 EEQFNINCALVRHSTRLLPGLSVQQTLALSLTKISGYLKSSK--VKQVMADMALSQVANK 144
+ + L L L+V++ L + Y +++K V Q++ D+ L
Sbjct: 269 IDGIRESLGLCPQHNVLFDRLTVEEHLEFFINLKGKYGQAAKDEVLQMITDLQLLDKRKA 328
Query: 145 CVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIIL 204
+ L+ R+L + L+ + LDEPT +DP +L K G +IL
Sbjct: 329 KSSELSGGMKRKLNCAIALVGGSETVFLDEPTSGMDPYARRATWDLL--LKHKAGKTVIL 386
Query: 205 TMEKPRSDVFPFL-DRVVYLCLGDVVYAG 232
T D FL DR+ + G + G
Sbjct: 387 TTH--FMDEADFLGDRIAIMADGQLRCCG 413
>SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1250
Score = 49.2 bits (112), Expect = 9e-06
Identities = 44/211 (20%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPLEEEQFNIN--- 93
+LKDV+F+ + E I G G+GK +L+ + R +G +L++G+ + +
Sbjct: 1026 VLKDVTFSINPAERVGIAGRTGAGKSSLVSALFRMPDPEGRILIDGLDISSIDIQSSRRA 1085
Query: 94 CALVRHSTRLLPG---LSVQQTLALSLTKISGYLKSSKVKQVMADM--ALSQVANKCVTN 148
+++ L G L++ + +I L+ + +K+ + M L +C +N
Sbjct: 1086 ISVISQDPILFTGSLRLNLDPFDKYADEEIWDALEGASLKRTILQMPGQLMTQLMECGSN 1145
Query: 149 LTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEK 208
L+ E + L + +++ I++LDE T ++D L+ + K+ ++T+
Sbjct: 1146 LSAGERQLLCLARAMLQRNNIIVLDEATANVDFKTDALIQETIRT---KFKGCTVITIAH 1202
Query: 209 PRSDVFPFLDRVVYLCLGDVVYAGPTRNLLD 239
+ + + D+++ L G V G + L++
Sbjct: 1203 RLNTIMDY-DKILVLERGRVAEYGTPQELME 1232
>SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1184
Score = 49.2 bits (112), Expect = 9e-06
Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPLEE---EQFNIN 93
ILK V+ + T I+G GSGK +L+ + R + G + ++G+ + +
Sbjct: 987 ILKGVTCKFEGRKNTGIMGRTGSGKSSLVAALMRMPEADGKIFVDGIDISTVNIRETRKR 1046
Query: 94 CALVRHSTRLLPGLSVQQTL----ALSLTKISGYLKSSKVKQVMADMALSQVANKCV--- 146
+++ S + G S+++ L + ++I G L+ +++ V+ ++ S++ K +
Sbjct: 1047 MSILSQSPVIFRG-SIRENLDPYGEFADSEIWGTLERVQMRDVVENLE-SRLHYKLMDEG 1104
Query: 147 TNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNT 184
+NL+ E + + + L+R IL+LDEPT +DPL T
Sbjct: 1105 SNLSLGERQLICLARVLLRKNRILILDEPTAHVDPLTT 1142
Score = 33.1 bits (72), Expect = 0.64
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 36 VILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVP-SKGHVLLEG 82
V++ D++ G +TA+ G GSGK +LL I+ +P + G + +G
Sbjct: 427 VLINDITVQLPEGSLTAVTGPVGSGKTSLLLTISGELPLASGELYCKG 474
>SB_39746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 47.2 bits (107), Expect = 4e-05
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRV-PSKGHVLLEGVPLE--EEQFNIN 93
+L +VSF G+V A++G G GK ++++ P+ G VL++ VP++ + + N
Sbjct: 369 VLDNVSFMVEPGQVVALVGPSGGGKSTCINLLEHLYEPTGGEVLIDAVPVKDLDHYYLHN 428
Query: 94 CALVRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMAD---------MALSQVANK 144
+ +L S+++ +A + ++ ++ + +A+ +
Sbjct: 429 KVSLVGQEPVLFARSIKKNIAYGVEDLADNPETVEHVSRLANAHSFVSGMPKGYDTETGE 488
Query: 145 CVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLV 187
L+ + +R+ I LIR+P ILLLDE T LD + +LV
Sbjct: 489 KGLQLSGGQKQRIAIARALIRNPKILLLDEATSALDAESEHLV 531
>SB_36627| Best HMM Match : ABC_tran (HMM E-Value=5.4e-06)
Length = 240
Score = 46.8 bits (106), Expect = 5e-05
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSK-GHVLLEGVPL----EEEQFN 91
IL+ +SF GEVT +LG G GK LL + +P+K G V EG P+ ++ +
Sbjct: 98 ILRGLSFDVKVGEVTCLLGRNGVGKTTLLKCLMGLIPAKEGAVQWEGQPITGFKPHQRVH 157
Query: 92 INCALVRHSTRLLPGLSVQQTLALSLTKISG 122
A V + L+V++ L + L++ G
Sbjct: 158 AGIAYVPQGREIFGRLTVEENLLMGLSRFPG 188
Score = 33.1 bits (72), Expect = 0.64
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 163 LIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVY 222
L++DP +LLLDEP + T + + A+K+ ++ +E V D V
Sbjct: 3 LVQDPQLLLLDEPVAGMTDAETEFTAELFKSLARKHS---LMVVEHDMGFVGSIADHVTV 59
Query: 223 LCLGDVVYAG 232
L G V+ G
Sbjct: 60 LHQGSVLAEG 69
>SB_59776| Best HMM Match : ABC_tran (HMM E-Value=0.00016)
Length = 113
Score = 45.6 bits (103), Expect = 1e-04
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 128 KVKQVMADMALSQVANKC------VTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDP 181
KV++V+ ++ L + A+ V ++ E +RL +++ P IL DEPT LD
Sbjct: 17 KVEEVITELGLLKCADTVIGTPGRVRGISGGEQKRLSFASEILTGPSILFADEPTSGLDS 76
Query: 182 LNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDR 219
V++ L A + G II T+ +P S+V+ R
Sbjct: 77 FMAQSVVATLQKLAAQ-GRTIICTIHQPSSEVYNMFSR 113
>SB_40434| Best HMM Match : ABC2_membrane (HMM E-Value=0.0087)
Length = 405
Score = 45.2 bits (102), Expect = 1e-04
Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 4/174 (2%)
Query: 179 LDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVYLCLGD-VVYAGPTRNL 237
LD ++ LV+ L A+K +I + +PR ++F + +V++L G V+ G
Sbjct: 3 LDSTSSLLVLDALRAVAEKGKLTVICVIHQPRFEIFDRMHKVLFLGPGGRTVFQGTVDES 62
Query: 238 LDYFGSIGFPCPQLENPLMYYLCLSTVDRRSRERFIESNHQIAALVEKFKIEGQAIMQGN 297
+ YF S+ P NP ++ + + + + N A L ++++ G+
Sbjct: 63 MAYFSSLNLRMPANVNPADFF--MDVIGGLYDGKDADKNFTSAKLFDEWENHVGGKTAGS 120
Query: 298 LHENNRIVNPNKVQMNYGK-PGGFKTVWMLYLRTLATIFNLNKHGFKQMFMRLL 350
+ V P V ++ K PG F + R + F L K F+ LL
Sbjct: 121 SASPDHRVMPAIVTDHHRKLPGFFSQFFCFLSREIRLQFRLTKTLLMDQFLVLL 174
>SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 844
Score = 44.8 bits (101), Expect = 2e-04
Identities = 36/174 (20%), Positives = 82/174 (47%), Gaps = 12/174 (6%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRV-PSKGHVLLEGVPLEE---EQFNI 92
+LK + T SG+ A++G G GK L+ ++ R P++G V ++G+ + +
Sbjct: 134 VLKGLHLTIRSGQTVALVGESGCGKSTLIKLVQRFYDPAEGTVCMDGIDIRSLNLKWLRQ 193
Query: 93 NCALVRHSTRLLPGLSVQQTL-----ALSLTKISGYLKSSKVKQVMADM--ALSQVANKC 145
+ +V +L +V + + ++ +I K + + ++ + V +
Sbjct: 194 HIGVVSQEP-ILFATTVAENIRYGREGITQAEIEKATKMANAHDFIRNLPQGYNTVVGER 252
Query: 146 VTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYG 199
++ + +R+ I L+++P +L+LDE T LD + +V + L + ++ G
Sbjct: 253 GAQMSGGQKQRIAIARALVKNPTLLILDEATSALDTESEKIVQAALDKSFEEEG 306
Score = 41.5 bits (93), Expect = 0.002
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 16/158 (10%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRV-PSKGHVLLEGVPLEE---EQFNI 92
+L+ +S + G+ A++G G GK + ++ R P G + ++ + + +
Sbjct: 684 VLRGLSLEVNQGQTLALVGPSGCGKSTTVSLLERFYDPEDGEMAIDNANVRQLNLKWLRS 743
Query: 93 NCALVRHSTRLLPGLSVQQTLA-------LSLTKISGYLKSSKVKQVMADMAL---SQVA 142
+V L G S+ Q +A +S+ +I K++ + + + ++V
Sbjct: 744 KIGIVSQEPVLF-GYSIAQNIAYGDNSREVSMAEIETAAKAANIHNFICGLPKGYDTEVG 802
Query: 143 NKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLD 180
+K T ++ + +R+ I LIR+P ILLLDE T LD
Sbjct: 803 DKG-TLISGGQKQRIAIARALIRNPPILLLDEATSALD 839
>SB_15716| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 44.8 bits (101), Expect = 2e-04
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 129 VKQVMADMALSQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVI 188
V ++ M L Q + C + R+L + L+ +P I+ +DEPT +DP +
Sbjct: 1472 VNSLIQRMNLVQYQDVCAGKYSGGNKRKLSTAIALVGNPAIVFMDEPTTGMDPKARRFLW 1531
Query: 189 SILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVYLCLGDVVYAGPTRNLLDYFG 242
+I++ K+ G +ILT + +RV + G + G ++L + FG
Sbjct: 1532 NIITGIMKE-GRTVILTSHS-MEECEALCNRVAIMVNGQMKCLGSPQHLKNKFG 1583
Score = 43.2 bits (97), Expect = 6e-04
Identities = 30/135 (22%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 109 VQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKCVTNLTKSEYRRLVIGVQLIRDPI 168
V +L+ + +S + S + D+ L+ ++ NL+ R+L + + + +
Sbjct: 403 VVSSLSFVVNSLSFVVSSLSFWSFLKDVGLTNKRHELSANLSGGMKRKLSVAMAFVAESR 462
Query: 169 ILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVYLCLGDV 228
+++LDEPT +DP + +L KK T ++ T +DV DR+ + G +
Sbjct: 463 VVILDEPTAGVDPYARRSIWDLLLK-YKKDRTVLLSTHHMDEADVLG--DRIAIISQGKL 519
Query: 229 VYAGPTRNLLDYFGS 243
G + L ++G+
Sbjct: 520 QCCGTSLFLKSHYGN 534
>SB_59051| Best HMM Match : ABC_tran (HMM E-Value=2.4e-41)
Length = 474
Score = 42.7 bits (96), Expect = 8e-04
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLE-----GVPLEEEQFNI 92
LKD++F+ +GE I+G GSGK +++ + R +G +L++ G+ L+ + I
Sbjct: 83 LKDLTFSVSAGEKIGIVGRNGSGKSSVIHALFRMPEIEGKILIDDVDIKGMNLQRSRQGI 142
Query: 93 N---------CALVRHSTRLLPGLSVQQTL-ALSLTKISGYLKSSKVKQVMADMALSQVA 142
+ C VR + + ++ AL + ++++ KQ+ D+A
Sbjct: 143 SVITKDPVIFCGNVRCNVDPFSKRTDKEVWEALDKVHLKPWVETLP-KQLYQDLA----- 196
Query: 143 NKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAI 202
+C + E + + + L+ + IL+LDE T +D LV I+ + K+ +
Sbjct: 197 -ECSAAFSTGEKQLVALARALVYNTKILVLDEATSVVDYKTDRLVQEIIRS---KFKNST 252
Query: 203 ILTMEKPRSDVFPFLDRVVYLCLGDVVYAGPTRNLL 238
I+T+ S + + DRV+ L G +V LL
Sbjct: 253 IITVPHRLSTIIDY-DRVMVLDNGRIVEFDKPETLL 287
>SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0)
Length = 1301
Score = 41.9 bits (94), Expect = 0.001
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 10/168 (5%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPLEEEQFNINCAL 96
+L +S T SG+ A++G G GK ++ +I R + + V E F A
Sbjct: 669 VLNGLSLTVRSGQTVALVGESGCGKSTVIKLIQRFYDPENGSRIGVVSQEPALFATTIAE 728
Query: 97 -VRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKCVTNLTKSEYR 155
+R+ + ++Q A + ++ +K+ + V + + L+ + +
Sbjct: 729 NIRYGQDGVTQAEIEQ--AAKMANAHDFI--TKLPK-----GYETVVGEQGSQLSGGQKQ 779
Query: 156 RLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAII 203
R+ I L+R+P IL+LDE T LD + +V + L A + T +I
Sbjct: 780 RVAIARALVRNPRILILDEATSALDTESERVVQAALDKAREGRTTLVI 827
>SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1238
Score = 40.3 bits (90), Expect = 0.004
Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 16/206 (7%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPLEEEQFNINCAL 96
+L+ +S E I+G G+GK +L+ + R KG VL++GV L +I A
Sbjct: 1011 VLEGISLEVQPKEKVGIVGRTGAGKSSLVAALFRMPEPKGRVLIDGVDL--GTLDIQSAR 1068
Query: 97 VRHSTRLLPGLSVQQTLALSLTKISGYLKS---SKVKQVMADMALSQVANKCVTNLTKS- 152
+ + TL +L + + + ++ V + ++ K L +S
Sbjct: 1069 KAMAVITQEPVLFSGTLKRNLDPMQQFTNQEVWTALENVQMMKCVKRLPGKLEYRLGESG 1128
Query: 153 ------EYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTM 206
E + L + L++ +L+LDE T ++D LV ++ + K+ +LT+
Sbjct: 1129 SGFSVGERQLLCLARALLQKSKLLVLDEATANVDYRTDRLVQQVIRD---KFADVTVLTI 1185
Query: 207 EKPRSDVFPFLDRVVYLCLGDVVYAG 232
+ + + D+VV + G VV G
Sbjct: 1186 AHRVNTIMDY-DKVVVIDTGRVVEYG 1210
Score = 38.7 bits (86), Expect = 0.013
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 36 VILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSK-GHVLLEG 82
V L DVS + HS ++ + G+ G GK +LL I R +P K G V + G
Sbjct: 415 VTLSDVSLSAHSSQLVMVTGAVGCGKTSLLMAILREIPIKHGSVDVRG 462
>SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1321
Score = 39.5 bits (88), Expect = 0.007
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPLEE 87
+LK+V F+ + E I+G G+GK +LL V+ R +G V ++G+P+ +
Sbjct: 772 VLKNVKFSIRNNEKVGIVGRTGAGKSSLLAVLFRLNNPEGLVRIDGLPITD 822
>SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 958
Score = 39.1 bits (87), Expect = 0.010
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 25 FQRLTGGVKTGVILKDVSFTTHSGEVTAILGSKGSGKRALLDVIA-RRVPSKGHVLLEG 82
F+ + + ILK ++ GE+ A++G GSGK LL+V+A R G VL+ G
Sbjct: 12 FKNIGVSINGREILKTINGKVRPGEMLALMGPSGSGKTTLLNVLAGRMAKDAGDVLING 70
>SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 618
Score = 38.3 bits (85), Expect = 0.017
Identities = 32/159 (20%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPLEE---EQFNIN 93
+L +V+ E ++G G+GK +LL + R KG + ++G+ + + +
Sbjct: 51 VLHNVTCVIKPSEKVGVVGRTGAGKSSLLSTLFRLAEPKGLIDIDGINIRKLGLKDLRSK 110
Query: 94 CALVRHSTRLLPGLSVQQTLALSLTKISG---YLKSSKVKQVMADM--ALSQVANKCVTN 148
+++ L G + S +G L ++KQ + D+ L + + +N
Sbjct: 111 LSIIPQDPVLFSGTMRKNLDPFSEHPDAGLWKVLDEVQLKQPVEDLPGKLDEELAEAGSN 170
Query: 149 LTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLV 187
+ + + + + ++R IL++DE T ++DP L+
Sbjct: 171 FSVGQRQLVCLARAILRHSRILVIDEATANVDPRTDALI 209
>SB_20094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 38.3 bits (85), Expect = 0.017
Identities = 18/45 (40%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIAR-RVPSKGHVLL 80
+LK+++ T + ++TAI+G+ GSGK L+ ++ + PS+G VLL
Sbjct: 240 VLKELNMTIPAKKITAIVGTSGSGKTTLMKLLLKFYEPSEGDVLL 284
>SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1266
Score = 38.3 bits (85), Expect = 0.017
Identities = 52/226 (23%), Positives = 101/226 (44%), Gaps = 19/226 (8%)
Query: 22 GSFFQRLTGGVKTGVILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLE 81
G + L GG + +L VS E I+G G+GK +L+ + R KG ++++
Sbjct: 1029 GVSLEYLEGGTR---VLDGVSLEVLPKEKVGIVGRTGAGKSSLVAALFRIREPKGRIVVD 1085
Query: 82 GVPLEEEQFNINCA----LVRHSTRLLPGLSVQQTL----ALSLTKISGYLKSSKVKQVM 133
G+ L NI A V T L+ S+++ L S +I L + ++K+ +
Sbjct: 1086 GIDL--GSLNIQDARRAMSVITQTPLVFSGSLRKNLDPFRCFSDQEIWTALNNVQMKKCV 1143
Query: 134 ADM--ALSQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISIL 191
+ L + + + E + L + L+++ +++LDE T ++D LV ++
Sbjct: 1144 ESLPGKLEYRLGESGSGFSVGERQLLCLARALLQNTKLIVLDEATANVDYRTDRLVQQVI 1203
Query: 192 SNAAKKYGTAIILTMEKPRSDVFPFLDRVVYLCLGDVVYAGPTRNL 237
+ + +LT+ + + + D+VV + G VV G + L
Sbjct: 1204 RD---MFADVTVLTIAHRVNTIMDY-DKVVVMDAGHVVEYGEPQEL 1245
>SB_37816| Best HMM Match : ABC_tran (HMM E-Value=0.03)
Length = 73
Score = 37.9 bits (84), Expect = 0.023
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 146 VTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILT 205
+ L+ E RR++I L+ P LLLDEP LDP + L + A+ T +++T
Sbjct: 1 MATLSTGEARRVLIARALVHRPRALLLDEPCAGLDPATRRQFLEALRDVARSGVTLVLVT 60
Query: 206 MEKPRSDVFPFLDRV 220
++ P +D +
Sbjct: 61 HHV--EEILPEIDHL 73
>SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 37.9 bits (84), Expect = 0.023
Identities = 50/219 (22%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 28 LTGGVKTGVILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVP--- 84
L GG + +L+ V+ E I+G G+GK +L+ + R KG VL++GV
Sbjct: 1085 LEGGTR---VLEGVNLEVDPKEKIGIVGRTGAGKSSLVAALFRMPEPKGRVLIDGVDLGN 1141
Query: 85 LEEEQFNINCALVRHSTRLLPGLSVQQTL----ALSLTKISGYLKSSKVKQVMADMA--L 138
L+ + A+V + G S+++ L +I L++ K+K + ++ L
Sbjct: 1142 LDIQAARRAIAVVTQEPVVFAG-SLRRNLDPFDQFKDQEIWTALENVKMKHCIENLTGKL 1200
Query: 139 SQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKY 198
+ + + E + L + ++ +L+LDE T ++D LV ++ +K+
Sbjct: 1201 EYHLGESGSGFSVGERQLLCLARAALQKCKLLVLDEATANVDYRTDRLVQQVI---REKF 1257
Query: 199 GTAIILTMEKPRSDVFPFLDRVVYLCLGDVVYAGPTRNL 237
+LT+ + + + +VV + G VV G + L
Sbjct: 1258 ADVTVLTIAHRVNTIMDY-GKVVVMDAGHVVEYGEPKAL 1295
Score = 33.9 bits (74), Expect = 0.37
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 34 TGVILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSK-GHVLLEG 82
T + L+ VS + S +V + G G GK ALL I + +P K G V L G
Sbjct: 493 TFLTLRHVSLSASSNQVVMVTGPVGCGKTALLMAILKEIPLKQGSVTLCG 542
>SB_32252| Best HMM Match : RVT_1 (HMM E-Value=9.2e-21)
Length = 1033
Score = 37.5 bits (83), Expect = 0.030
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPL 85
+LKDVS E I+G G+GK +LL + R KG + ++GV +
Sbjct: 891 VLKDVSVHIKPAEKVGIVGRTGAGKSSLLATLFRMAEPKGKIEIDGVDI 939
>SB_27355| Best HMM Match : ABC_tran (HMM E-Value=1.1e-37)
Length = 226
Score = 37.1 bits (82), Expect = 0.040
Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 7/183 (3%)
Query: 49 EVTAILGSKGSGKRALLDVIARRV-PSKGHVLLEGVPLEEEQFNINCALVRHSTRLLPGL 107
E+ ++G G+GK LL + + P+ G + + + T G
Sbjct: 2 EIIGLVGENGNGKTTLLRSLCGELNPTSGTIKYHFDYEDGYDLKTKLVYIPQRTDTWRG- 60
Query: 108 SVQQTLALSLTKISGYLKSSK---VKQVMADMALSQVANKCVTNLTKSEYRRLVIGVQLI 164
S+ + L + + GYL + ++ + L + N + L+ R + L+
Sbjct: 61 SMYENLEFTAS-CYGYLPEENNLVIDLIITRLGLRKFRNHNWSGLSSGYKMRFELARMLL 119
Query: 165 RDPIILLLDEPTWDLDPLNTYLVISILSNAAKK-YGTAIILTMEKPRSDVFPFLDRVVYL 223
R P ILL+DEP +LD L V+ N A + I+ + +V ++VV+L
Sbjct: 120 RKPKILLIDEPLANLDILAQQTVLDDFRNIANSPFRPIAIVLSSQQLYEVEKTSNQVVFL 179
Query: 224 CLG 226
G
Sbjct: 180 KQG 182
>SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1636
Score = 37.1 bits (82), Expect = 0.040
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 155 RRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVF 214
R+L + L+ DP ++ LDEPT +DP+ L+ LS + G II+T +
Sbjct: 1458 RKLSTAIALVGDPPVVFLDEPTTGMDPVARRLLWDALSR-VRAEGRCIIITSHS-MEECD 1515
Query: 215 PFLDRVVYLCLGDVVYAGPTRNLLDYFGSIGF 246
R+ + G G ++L FG GF
Sbjct: 1516 ALCTRLAIMVNGRFKCLGSPQHLKTKFGE-GF 1546
Score = 36.3 bits (80), Expect = 0.069
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 36 VILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRV-PSKGHVLLEGVPLEEEQFNINC 94
V + VS + G++TA+LG G+GK L+ ++ P+ G+ ++ G + ++ +
Sbjct: 323 VAVDGVSLNMYEGQITALLGHNGAGKTTLMSMLTGLFPPTSGNAVVNGCSITDDISGVRS 382
Query: 95 AL 96
+L
Sbjct: 383 SL 384
>SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 36.7 bits (81), Expect = 0.052
Identities = 44/211 (20%), Positives = 98/211 (46%), Gaps = 14/211 (6%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVP---LEEEQFNIN 93
+LKDVSF+ + I+G G+GK +++ + R + +L++ V L +
Sbjct: 1482 VLKDVSFSIEPRQKFGIVGRTGAGKSSIVASLMRMPEATFGILIDDVEIRGLNLQSTREV 1541
Query: 94 CALVRHSTRLLPGLSVQQTL-ALSL---TKISGYLKSSKVKQVMA--DMALSQVANKCVT 147
++++ S + G S++ L L + ++ L +++ ++ D L + +
Sbjct: 1542 VSVIQQSPVMFCG-SIRNNLDPLDMYTDDEVWIALHDAQLGSLVTSLDGKLEYHIQEGGS 1600
Query: 148 NLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTME 207
N + E + + L+ I+++DE T ++DP +++ + + + K+ +LT+
Sbjct: 1601 NFSVGERQLFSLARALLHKNKIIVMDEATANVDPQTDHMIQTTIRD---KFKDCTVLTIA 1657
Query: 208 KPRSDVFPFLDRVVYLCLGDVVYAGPTRNLL 238
S + DR++ L G VV G + L+
Sbjct: 1658 HRLSTIMD-CDRIMVLHDGQVVEMGTPQELM 1687
>SB_40695| Best HMM Match : ABC_tran (HMM E-Value=7.79963e-42)
Length = 355
Score = 36.3 bits (80), Expect = 0.069
Identities = 43/211 (20%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVP---LEEEQFNIN 93
+LKDV+F+ + I G G+GK +++ + R + + ++GV L +
Sbjct: 135 VLKDVTFSIEPQQKIGIAGRTGAGKSSIVASLMRMPEATPGIQIDGVDICGLNLQSTRQA 194
Query: 94 CALVRHSTRLLPGLSVQQTL----ALSLTKISGYLKSSKVKQVMADMA--LSQVANKCVT 147
++++ + + G S++ L + +I L +KV +++ + L +
Sbjct: 195 VSVIQQNPVMFCG-SIRNNLDPFDIYTDDEIWSALHDAKVGPLVSGLVGKLKYHIQEGGA 253
Query: 148 NLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTME 207
N + E + + L+ I+++DE T ++DP +L+ + + + K+ +L +
Sbjct: 254 NFSVGERQLFSLARALLHKKKIIVMDEATANVDPQTDHLIQTTIRD---KFKDCTVLIIA 310
Query: 208 KPRSDVFPFLDRVVYLCLGDVVYAGPTRNLL 238
S + DR++ L G VV G L+
Sbjct: 311 HRLSTIMD-CDRIMVLHDGQVVEMGTPEALM 340
>SB_37300| Best HMM Match : MMR_HSR1 (HMM E-Value=0.061)
Length = 152
Score = 36.3 bits (80), Expect = 0.069
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 32 VKTGVILKDVSFT--THSGEVTAILGSKGSGKRALLDVIARRVPSKGHV 78
V++G + + + F+ + GE+ A++G+ GSGK L++V+A R HV
Sbjct: 30 VESGKVYRHLCFSGKVNPGELVAVMGASGSGKTTLINVLAHRNIGSMHV 78
>SB_52342| Best HMM Match : ABC_tran (HMM E-Value=5.29999e-41)
Length = 336
Score = 35.9 bits (79), Expect = 0.091
Identities = 38/182 (20%), Positives = 80/182 (43%), Gaps = 20/182 (10%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVP-SKGHVLLEGVPLEEEQFNINCA 95
+LK++SFT G+ A++G+ G GK ++ ++ R G + ++G + + +
Sbjct: 157 VLKNISFTVFPGQTLALVGNSGGGKSTIIRLLYRFYDVGSGCISIDGQDISK----VTSK 212
Query: 96 LVRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKCVT-------- 147
+R ++P +V + G L++ A A + + N+ +T
Sbjct: 213 SLRQVIGVVPQDTVLFNNDIRFNVRYGRLEADDAAVEEAAQA-ADIHNRILTFPEGYNSL 271
Query: 148 ------NLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTA 201
L+ E +R+ I ++++P ++LLDE T LD + + L+N T
Sbjct: 272 VGERGLKLSGGEKQRVAIARTVLKNPPVVLLDEATSALDTETERNIQASLNNMCINRTTI 331
Query: 202 II 203
++
Sbjct: 332 VV 333
>SB_26620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 433
Score = 35.9 bits (79), Expect = 0.091
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 27 RLTGGVKTGVILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRV---PSKGHVLLEGV 83
+L G K V++ V+ SGEVTA++G G+GK L+ ++ + G + + GV
Sbjct: 321 KLNSGTKKTVLM-GVTGKIKSGEVTAVMGPSGAGKTTFLNTLSGKAYYGNRGGDIFINGV 379
Query: 84 PLEE-EQFNINCALVRHSTRLLPGLSVQQTLALSL-TKISGYLKSSK 128
+ +++ V + L+V++ L ++S KSSK
Sbjct: 380 KESDFDKYRTITGFVPQEDVMHRNLTVKEVLRYQAELRLSSSTKSSK 426
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 35.9 bits (79), Expect = 0.091
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 149 LTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEK 208
L+ + +R+ I ++++P ILLLDE T LD + +LV L K G +I
Sbjct: 1190 LSGGQRQRIAIARAILKNPKILLLDEATSALDSESEHLVQEALERLMK--GRTVITIAH- 1246
Query: 209 PRSDVFPFLDRVVYLCLGDVVYAGPTRNLLD 239
R D +V L G +V +G L++
Sbjct: 1247 -RLSTIKNADNIVVLDGGSIVESGSYSQLME 1276
>SB_31867| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 674
Score = 35.5 bits (78), Expect = 0.12
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVP-SKGHVLLEG-VPLEEEQFNINCA 95
L +SF SG + ++G+ GSGK +LL+ I +P S+G + ++G V +Q + +
Sbjct: 368 LDGLSFDVPSGCLLGVIGAVGSGKSSLLNAILGELPLSEGSIRVQGRVAYASQQAWVYNS 427
Query: 96 LVRHS 100
+RH+
Sbjct: 428 TLRHN 432
>SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1308
Score = 35.5 bits (78), Expect = 0.12
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 12/209 (5%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPLEEE--QFNINC 94
+LK+V+F E I G G+GK +++ + R + G ++++GV + Q
Sbjct: 1063 VLKEVNFRIGCHEKVGIAGRTGAGKTSIVSCLLRMPEATGDIMIDGVNIHHVTLQETRQA 1122
Query: 95 ALVRHSTRLLPGLSVQQTL----ALSLTKISGYLKSSKVKQVMADM--ALSQVANKCVTN 148
V +L S+++ L S +I L +S++ + ++ L + N
Sbjct: 1123 ISVIQQNPVLFCRSIRENLDPFGMFSDAEIWNALHNSQLGTFVGNLNGKLDFQVKEGGAN 1182
Query: 149 LTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEK 208
+ E + + L+ I+++DE T ++D NT +I + +K+ +L +
Sbjct: 1183 FSAGEMQLFCMARALLHKNKIIVMDEATANVDQ-NTDRLIQ--TTIREKFQDCTVLIIAH 1239
Query: 209 PRSDVFPFLDRVVYLCLGDVVYAGPTRNL 237
S + DR++ + G VV +NL
Sbjct: 1240 RLSTILD-CDRIMVVDDGRVVEFDTPQNL 1267
Score = 32.7 bits (71), Expect = 0.85
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 25 FQRLTGGVKTGVILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVP-SKGHVLLEG 82
FQ+ GG + DV+ + ++ A++G+ GSGK LL I +V +KG + G
Sbjct: 417 FQKHKGGRD---VFCDVNLSVEENDIVAVIGAVGSGKTTLLSAILGQVSCTKGKIKSRG 472
>SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 641
Score = 35.5 bits (78), Expect = 0.12
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVP-SKGHVLLEG-VPLEEEQFNINCA 95
L +SF SG + ++G+ GSGK +LL+ I +P S+G + ++G V +Q + +
Sbjct: 37 LDGLSFDVPSGCLLGVIGAVGSGKSSLLNAILGELPLSEGSIRVQGRVAYASQQAWVYNS 96
Query: 96 LVRHS 100
+RH+
Sbjct: 97 TLRHN 101
>SB_53189| Best HMM Match : ABC_tran (HMM E-Value=0.021)
Length = 127
Score = 35.1 bits (77), Expect = 0.16
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRV---PSKGHVLLEGVPLEE-EQFNI 92
+L V+ +SGEVTA++G G+GK L+ ++ + G + + GV + +++
Sbjct: 6 VLAGVTGKINSGEVTAVMGPSGAGKTTFLNTLSGKAYYGNRGGDIFINGVKESDFDKYRT 65
Query: 93 NCALVRHSTRLLPGLSVQQTLALSL-TKISGYLKSSK----VKQVMADMALSQV 141
V + L+V++ L ++S KSSK V+Q++ + L ++
Sbjct: 66 ITGFVPQEDVMHRNLTVKEVLRYQAELRLSSSTKSSKKHERVQQIIELLQLERI 119
>SB_25545| Best HMM Match : ABC_tran (HMM E-Value=0.00042)
Length = 146
Score = 34.7 bits (76), Expect = 0.21
Identities = 17/73 (23%), Positives = 37/73 (50%)
Query: 109 VQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKCVTNLTKSEYRRLVIGVQLIRDPI 168
V +L+ + +S + S + D+ L+ ++ NL+ R+L + + + +
Sbjct: 58 VVSSLSFVVNSLSFVVSSLSFWSFLKDVGLTNKRHELSANLSGGMKRKLSVAMAFVAESR 117
Query: 169 ILLLDEPTWDLDP 181
+++LDEPT +DP
Sbjct: 118 VVILDEPTAGVDP 130
>SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36)
Length = 972
Score = 34.3 bits (75), Expect = 0.28
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPLEEEQ 89
+L++++F GE I+G G K +LL + R +G V ++G+P+ + Q
Sbjct: 819 VLRNMNFCIKGGEKVGIVGRNGLEKSSLLAALLRLNTPEGIVRIDGLPITDLQ 871
>SB_34187| Best HMM Match : ABC_tran (HMM E-Value=1.49995e-41)
Length = 1515
Score = 34.3 bits (75), Expect = 0.28
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPL 85
+L+D++ GE I+G G+GK ++ + R G V ++GV L
Sbjct: 1351 VLRDITLDVRPGERVGIVGKTGAGKSSVFAALFRMPDPTGEVWVDGVEL 1399
>SB_56043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 33.9 bits (74), Expect = 0.37
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRV-PSKGHVLLEGVPLEE 87
IL +SF+ +G+ AI+G GSGK ++ ++ R P G VL+ G + +
Sbjct: 426 ILDGLSFSIPAGKKVAIVGGSGSGKSTIVRLLFRFFDPQGGRVLVAGQDIRD 477
>SB_58724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 33.5 bits (73), Expect = 0.49
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIA 69
+L+ V+ +GEVTAI+G G+GK LL+ ++
Sbjct: 153 VLQSVTGEIRAGEVTAIMGPSGAGKTTLLNTLS 185
>SB_44672| Best HMM Match : ABC_tran (HMM E-Value=4.2039e-44)
Length = 945
Score = 33.1 bits (72), Expect = 0.64
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Query: 132 VMADMALSQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISIL 191
++ D+ L N V L+ R+L + + + ++LDEPT +DP + +L
Sbjct: 590 LVEDIGLPNKRNCAVETLSGGMKRKLSVAMAFVAGSRTVILDEPTAGVDPYARRAIWDLL 649
Query: 192 SNAAKKYGTAIILTMEKPRSDVFPFLDRVVYLCLGDVVYAGPTRNLLDYFG 242
KK T ++ T +D+ DR+ + G + G L FG
Sbjct: 650 IK-YKKGRTILLSTHFMEEADILG--DRIAIISSGKLRCVGSPLYLKRRFG 697
>SB_58705| Best HMM Match : ABC_tran (HMM E-Value=5.7e-05)
Length = 284
Score = 32.7 bits (71), Expect = 0.85
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARR 71
+L DVS G + A++G+ G+GK L++V+A R
Sbjct: 132 VLFDVSGRAEPGTLLAVMGASGAGKSTLMNVLAYR 166
>SB_40697| Best HMM Match : ABC_tran (HMM E-Value=7.1e-07)
Length = 659
Score = 32.3 bits (70), Expect = 1.1
Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 19/137 (13%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIA-------RRVPSKGHV--------LLE 81
IL D+S + A++G GSGK LL+ I+ +V ++G + +
Sbjct: 407 ILHDISMEVSDDSLVAVIGPVGSGKSTLLETISGMDPTFRGKVETRGSIAYVPQMPWIFL 466
Query: 82 GVPLEEEQFNINCALVRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMADMALSQV 141
G E FN + ++ R++ ++QT L ++ +SKV+ +
Sbjct: 467 GTVRENILFNASYDADKYE-RVIEACDLKQTAELYYLLVT---NTSKVRVDFYKSGTAHT 522
Query: 142 ANKCVTNLTKSEYRRLV 158
+C+ + KS+ R LV
Sbjct: 523 LQRCICGVLKSKLRVLV 539
>SB_10268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 32.3 bits (70), Expect = 1.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIAR 70
+LK +SF + GE A++G G GK ++ +I R
Sbjct: 175 VLKALSFKINPGETVALVGPSGGGKSTVISLIER 208
>SB_53871| Best HMM Match : ABC_tran (HMM E-Value=1.49939e-42)
Length = 347
Score = 31.9 bits (69), Expect = 1.5
Identities = 42/207 (20%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVP---LEEEQFNIN 93
+LK V+F+ + I G G+GK +++ + R + + ++ V L +
Sbjct: 127 VLKGVTFSIEPQQKIGIAGRTGAGKSSIVASLMRMPEASSGIHIDDVDIRGLNLQSTRQV 186
Query: 94 CALVRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKC-------- 145
++++ + LL G T+ +L + Y ++ ++D+ LS V +K
Sbjct: 187 VSVIQQNPTLLSG-----TIRSNLDPLDMY-TDDEIWSALSDVNLSPVMDKWGYDLEHRI 240
Query: 146 ---VTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAI 202
NL+ E + + L++ I+++DE T ++DP ++ + + + K+
Sbjct: 241 EEGGVNLSVGERQLFSLARALLQKNKIIVMDEATANVDPKTDKMIQTTIRD---KFKDCT 297
Query: 203 ILTMEKPRSDVFPFLDRVVYLCLGDVV 229
+L + S + DR++ L G VV
Sbjct: 298 VLIIAHRLSTIMD-CDRIMVLHNGQVV 323
>SB_7501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 31.9 bits (69), Expect = 1.5
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 33 KTGVILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVP-SKGHVLLEG 82
+TG L ++SF G++ ++G+ GSGK +LL + +P ++G + G
Sbjct: 393 RTGT-LDNISFEIGKGDLLVVVGAVGSGKSSLLMAVLGELPLTRGDIKTRG 442
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVP-SKGHVLLEG 82
L+ +S GE+ + G G GK LL VI +P S G VL G
Sbjct: 503 LRSLSCMAFPGELVLVTGPVGCGKSTLLSVILGEIPISSGKVLRGG 548
Score = 31.1 bits (67), Expect = 2.6
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPL 85
+LK +S G+ ++G G+GK +L+ I R +G ++++ V L
Sbjct: 1187 VLKRISVHIKDGQKVGVVGRTGAGKSSLVRAIYRMPEPQGAIVVDDVDL 1235
>SB_49365| Best HMM Match : ABC_tran (HMM E-Value=3.5e-38)
Length = 283
Score = 31.1 bits (67), Expect = 2.6
Identities = 35/181 (19%), Positives = 79/181 (43%), Gaps = 20/181 (11%)
Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVP---LEEEQFNIN 93
+LK V+F+ + + G G+GK +++ + R + + ++ V L +
Sbjct: 70 VLKGVTFSVEPQQKIGVAGRTGAGKSSIVASLMRMPEASTGIHIDDVDIRGLNLQSTRQV 129
Query: 94 CALVRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKCV------- 146
++++ + LL G T+ +L + Y ++ ++D+ LS V +K
Sbjct: 130 VSVIQQNPTLLSG-----TIRSNLDPLDMY-TDDEIWSALSDVNLSPVMDKWAYDLEHRI 183
Query: 147 ----TNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAI 202
NL+ E + + L++ I+++DE T ++DP ++ + + + K I
Sbjct: 184 EEGGVNLSVGERQLFSLARALLQKNKIIVMDEATTNVDPQTDQMIQTTIRDKFKDCTVLI 243
Query: 203 I 203
I
Sbjct: 244 I 244
>SB_42212| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 301
Score = 31.1 bits (67), Expect = 2.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPL 85
L++V+ + I+G G+GK +L+ + R KG V+++G+ L
Sbjct: 78 LEEVNVRIQAKGKVGIVGRTGAGKSSLVAALFRMPEPKGEVIIDGIDL 125
>SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPL 85
L D++ + + I G G+GK +LL + R G VL++G+ L
Sbjct: 850 LDDITLEITAKQKVGIAGRTGAGKSSLLAALFRMPEPGGEVLIDGIDL 897
>SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 31.1 bits (67), Expect = 2.6
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSK-GHVLLEGVPL 85
LKD+S GE I+G G+GK +L + R + + G ++++GV +
Sbjct: 918 LKDISCDIQPGEKIGIVGRTGAGKSSLSLALFRMLEAAGGKIVIDGVDI 966
>SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42)
Length = 1264
Score = 30.7 bits (66), Expect = 3.4
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSK-GHVLLEG-VPLEEEQFNINCA 95
L D+SF+ E+ + G G GK +LL I +P K G + G + + I
Sbjct: 576 LLDISFSAGPNELVILTGPVGGGKSSLLMAILGEIPLKRGFIKAIGRISFANQNPWIFSG 635
Query: 96 LVRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKCVTNLTKSEYR 155
VR + +L GL + + + L+ + D LS + + + +L+ +
Sbjct: 636 TVREN--VLFGLPYDEAKYWRVLRACD-LEEDMLHFPYGD--LSVIGQRGI-SLSGGQRS 689
Query: 156 RLVIGVQLIRDPIILLLDEPTWDLDP 181
R+ + + D +LLLD+P +DP
Sbjct: 690 RVSLARAVYSDCDVLLLDDPLSAVDP 715
>SB_34997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 30.7 bits (66), Expect = 3.4
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVP-SKGHVLLEG 82
L++++ ++ E+T I G GSGK LL + +P ++G +L EG
Sbjct: 492 LQNLNMRANAKELTLINGPGGSGKSTLLLAVLGELPVTEGSILTEG 537
>SB_58013| Best HMM Match : ABC_membrane (HMM E-Value=6.3e-28)
Length = 951
Score = 30.7 bits (66), Expect = 3.4
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 32 VKTGVI--LKDVSFTTHSGEVTAILGSKGSGKRALLD-VIARRVPSKGHVLLEG 82
VKT ++ L D+ G + I GS GSGK +LL ++++ +KG V + G
Sbjct: 97 VKTKLVPSLFDIDLEVKKGSLIGICGSVGSGKSSLLQCILSQMRKTKGRVGIGG 150
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 30.3 bits (65), Expect = 4.5
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVP 73
L+ VSF +G++ I G GSGK LL I +P
Sbjct: 475 LQGVSFAAGAGDLVIITGPVGSGKSTLLMTIQGELP 510
Score = 29.5 bits (63), Expect = 7.9
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPL 85
L D++ + + I G G+GK LL + R G VL++GV L
Sbjct: 1085 LDDITLEITAKQRVGIAGRTGAGKSFLLAALFRLPEPGGEVLIDGVDL 1132
>SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12)
Length = 1290
Score = 29.5 bits (63), Expect = 7.9
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 15 HSGQVEPGSFFQRLTGGVKTGVILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPS 74
H GQV P + QR + G K + T H G+V I ++ + + +PS
Sbjct: 880 HKGQVHPIHWAQRASSSHPPGTKGKFIPSTGHKGQVHPIPRAQRASSSHPPGTKGKFIPS 939
Query: 75 KGH 77
GH
Sbjct: 940 TGH 942
>SB_20224| Best HMM Match : ABC_tran (HMM E-Value=2.2e-36)
Length = 380
Score = 29.5 bits (63), Expect = 7.9
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 31 GVKTGVILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPS-KGHVLLEG 82
G+ L +SF + G + A+ G GSGK LL I +P +G + G
Sbjct: 157 GISPKSSLSRLSFRINQGGLLAVTGPIGSGKSTLLLTILHELPKHRGQIWRSG 209
>SB_51493| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00067)
Length = 1873
Score = 29.5 bits (63), Expect = 7.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 353 PIYFFILWIFYNEAKPLNPRET 374
P Y + LW+F ++A+PL P ET
Sbjct: 1060 PEYEYHLWVFPSQAEPLQPGET 1081
>SB_50229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1719
Score = 29.5 bits (63), Expect = 7.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 353 PIYFFILWIFYNEAKPLNPRET 374
P Y + LW+F ++A+PL P ET
Sbjct: 819 PEYEYHLWVFPSQAEPLQPGET 840
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.326 0.141 0.427
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,464,008
Number of Sequences: 59808
Number of extensions: 743804
Number of successful extensions: 1999
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1889
Number of HSP's gapped (non-prelim): 106
length of query: 590
length of database: 16,821,457
effective HSP length: 86
effective length of query: 504
effective length of database: 11,677,969
effective search space: 5885696376
effective search space used: 5885696376
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 63 (29.5 bits)
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