BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000472-TA|BGIBMGA000472-PA|IPR003439|ABC transporter related (590 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 79 2e-15 SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 62 2e-10 SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 60 1e-09 SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 54 7e-08 SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 50 7e-07 SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 48 5e-06 SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 46 2e-05 SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 39 0.002 SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 37 0.009 SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 33 0.11 SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 32 0.19 SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 32 0.19 SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces pom... 32 0.26 SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 31 0.45 SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 31 0.59 SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 30 0.78 SPBC1105.05 |exg1||glucan 1,3-beta-glucosidase I/II precursor|Sc... 30 1.0 SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 29 1.4 SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 29 1.8 SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 29 2.4 SPBC1A4.02c |leu1|SPBC1E8.07c|3-isopropylmalate dehydrogenase Le... 27 7.3 SPAC823.13c |||mitochondrial inner membrane protein|Schizosaccha... 27 9.6 SPBC4.02c |||conserved fungal protein|Schizosaccharomyces pombe|... 27 9.6 SPBP8B7.12c |fta3|sma3|Sim4 and Mal2 associated |Schizosaccharom... 27 9.6 >SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter Bfr1|Schizosaccharomyces pombe|chr 3|||Manual Length = 1530 Score = 79.0 bits (186), Expect = 2e-15 Identities = 69/233 (29%), Positives = 118/233 (50%), Gaps = 25/233 (10%) Query: 48 GEVTAILGSKGSGKRALLDVIARRVPS---KGHVLLEGVPL-----------EEEQFNIN 93 G++TA++G G+GK LL+V+A+RV + G +L+ G L +++ +I Sbjct: 911 GKLTALMGESGAGKTTLLNVLAQRVDTGVVTGDMLVNGRGLDSTFQRRTGYVQQQDVHIG 970 Query: 94 CALVRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKCVTNLTKSE 153 + VR + R +++Q ++ L++ Y++ S +K + + + + L + Sbjct: 971 ESTVREALRF--SAALRQPASVPLSEKYEYVE-SVIKLLEMESYAEAIIGTPGSGLNVEQ 1027 Query: 154 YRRLVIGVQLIRDPIILL-LDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSD 212 +R IGV+L P +LL LDEPT LD + + ++ L A G AI+ T+ +P + Sbjct: 1028 RKRATIGVELAAKPALLLFLDEPTSGLDSQSAWSIVCFLRKLADA-GQAILCTIHQPSAV 1086 Query: 213 VFPFLDRVVYLCL-GDVVYAGP----TRNLLDYFGSIG-FPCPQLENPLMYYL 259 +F DR++ L G VY G ++ LL+YF S G CP NP Y L Sbjct: 1087 LFDQFDRLLLLQKGGKTVYFGDIGEHSKTLLNYFESHGAVHCPDDGNPAEYIL 1139 Score = 50.0 bits (114), Expect = 9e-07 Identities = 31/137 (22%), Positives = 53/137 (38%) Query: 139 SQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKY 198 ++V N V ++ E +R+ I P I D T LD + +++L A + Sbjct: 299 TKVGNDFVRGVSGGERKRVTISEGFATRPTIACWDNSTRGLDSSTAFEFVNVLRTCANEL 358 Query: 199 GTAIILTMEKPRSDVFPFLDRVVYLCLGDVVYAGPTRNLLDYFGSIGFPCPQLENPLMYY 258 +T + ++ DR+ L G +Y GP YF +GF C E + Sbjct: 359 KMTSFVTAYQASEKIYKLFDRICVLYAGRQIYYGPADKAKQYFLDMGFDCHPRETTPDFL 418 Query: 259 LCLSTVDRRSRERFIES 275 +S R + E+ Sbjct: 419 TAISDPKARFPRKGFEN 435 >SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1396 Score = 62.5 bits (145), Expect = 2e-10 Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 16/208 (7%) Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPS---KGHVLLEGVPLEEEQFNIN 93 IL +VS +TA+LG SGK LL ++++R + +G + L G+ + Sbjct: 776 ILTNVSGYLKKNTLTALLGENKSGKSVLLRILSQRGIAGSVEGEITLSGLK-NPKNLRKR 834 Query: 94 CALVRHSTRLLPGLSVQQTLALSLTKISGYLKS-----SKVKQVMADMALSQVANKCVTN 148 VR + + +V++TL L +S + V+ V+ + L +VA+ V + Sbjct: 835 IGYVRKNPLFISEYTVRETLRLHAALRQSKQRSLSEQYAYVEYVIDFLGLGEVADFIVGD 894 Query: 149 LTK--SEY--RRLVIGVQLIRDP-IILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAII 203 + K S Y R L I V+L P ILLLDEP LD + ++++ IL A+ G +I+ Sbjct: 895 MGKGLSLYHKRLLSIAVELSARPGSILLLDEPANGLDSQSAWMLVCILQKLARS-GLSIL 953 Query: 204 LTMEKPRSDVFPFLDRVVYLCL-GDVVY 230 ++ +P S + D ++ L L G+ VY Sbjct: 954 CSVSQPSSRILELFDMMLILDLNGNTVY 981 Score = 44.4 bits (100), Expect = 4e-05 Identities = 21/80 (26%), Positives = 38/80 (47%) Query: 167 PIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVYLCLG 226 P+I D D D ++ ++S + + K GT ++ + + +F D V + G Sbjct: 237 PLIQCWDNNMRDFDSISVIDILSRIKVLSHKLGTTLVAIVSQASDRIFHMFDMVTLMYEG 296 Query: 227 DVVYAGPTRNLLDYFGSIGF 246 + ++ GPT L YF +GF Sbjct: 297 EQIFYGPTSRLKPYFLDLGF 316 >SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosaccharomyces pombe|chr 3|||Manual Length = 1362 Score = 59.7 bits (138), Expect = 1e-09 Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 31/231 (13%) Query: 36 VILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRV-PSKGHVLLEGVPLEEEQFNINC 94 ++L + S SG++TA++G+ GSGK ++ ++ R P G V L+G L +N Sbjct: 436 LVLDNFSLVCPSGKITALVGASGSGKSTIIGLVERFYDPIGGQVFLDGKDLR----TLNV 491 Query: 95 ALVRHSTRLL---PGL---SVQQTLALSLTK-ISGYLKSSKVKQVMADMA--------LS 139 A +R+ L+ P L +V + + L I G L ++++ + D A + Sbjct: 492 ASLRNQISLVQQEPVLFATTVFENITYGLPDTIKGTLSKEELERRVYDAAKLANAYDFIM 551 Query: 140 QVANKCVTN-------LTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILS 192 + + TN ++ + +R+ I +I DP ILLLDE T LD + LV L Sbjct: 552 TLPEQFSTNVGQRGFLMSGGQKQRIAIARAVISDPKILLLDEATSALDSKSEVLVQKALD 611 Query: 193 NAAKKYGTAIILTMEKPRSDVFPFLDRVVYLCLGDVVYAGPTRNLLDYFGS 243 NA++ T +I R D +V + G +V G LLD G+ Sbjct: 612 NASRSRTTIVI----AHRLSTIRNADNIVVVNAGKIVEQGSHNELLDLNGA 658 Score = 52.0 bits (119), Expect = 2e-07 Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 18/182 (9%) Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVP-SKGHVLLEGVPLEEEQFNIN-- 93 +L+ ++ T G+ A +GS G GK + +I R G VL++GV + + +NIN Sbjct: 1136 VLRGLNLTVKPGQFVAFVGSSGCGKSTTIGLIERFYDCDNGAVLVDGVNVRD--YNINDY 1193 Query: 94 ---CALVRHSTRLLPGLSVQQTLALSLTK------ISGYLKSSKVKQVMADM--ALSQVA 142 ALV L G +V++ + L +K + K + + + + + + + Sbjct: 1194 RKQIALVSQEPTLYQG-TVRENIVLGASKDVSEEEMIEACKKANIHEFILGLPNGYNTLC 1252 Query: 143 NKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAI 202 + ++L+ + +R+ I LIR+P ILLLDE T LD + +V L NAA + T + Sbjct: 1253 GQKGSSLSGGQKQRIAIARALIRNPKILLLDEATSALDSHSEKVVQEAL-NAASQGRTTV 1311 Query: 203 IL 204 + Sbjct: 1312 AI 1313 >SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1336 Score = 53.6 bits (123), Expect = 7e-08 Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 9/176 (5%) Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRV-PSKGHVLLEGVPLEEEQFNINCAL 96 L +VS GE+ I+G GSGK + ++ R P+ G++ L+ PLEE ++ + Sbjct: 452 LINVSVFIPFGELVHIIGPSGSGKSTFISLLLRYFSPTYGNIYLDDFPLEEIDEHVLGST 511 Query: 97 VRHSTR--LLPGLSVQQTLALSLTKISGYLKSSKVKQVMAD-MALS---QVANKCV-TNL 149 + + ++ +++++ + + S + + D AL+ C +L Sbjct: 512 ITLVCQQPVIFDMTIRENIIMRNENASESDFEEVCRLALVDEFALTFDQSYDTPCKEASL 571 Query: 150 TKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILT 205 + + +R+ + L+RD IL+LDEPT LDP+ LV+ + A +K T +++T Sbjct: 572 SGGQQQRIALARALLRDTEILILDEPTSALDPITKNLVMDAI-RAHRKGKTTLVIT 626 Score = 53.6 bits (123), Expect = 7e-08 Identities = 51/211 (24%), Positives = 100/211 (47%), Gaps = 17/211 (8%) Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPLEEEQFN---INC 94 L +VS + + E AI+G GSGK L++++ + PS+ + ++G PL N Sbjct: 1118 LNNVSLSIEAREKVAIVGISGSGKSTLVELLRKTYPSE-DIYIDGYPLTNIDTNWLLKKV 1176 Query: 95 ALVRHSTRLLPGLSVQQTLAL----SLTKISGYLKSSKVKQVMADM--ALSQVANKCVTN 148 A+V LL G ++ ++L + + L + + +V+ ++ L + N Sbjct: 1177 AIVDQKPHLL-GSTILESLLYGVDRDINSVMDALDKTYMTEVIQNLPNGLDTPLLEFSKN 1235 Query: 149 LTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEK 208 + + +RL L+R+P +L+LDE T LD ++ L+ + N + T +I+T + Sbjct: 1236 FSGGQIQRLAFARALLRNPRLLILDECTSALDSKSSLLLEKTIQNLS---CTVLIITHQ- 1291 Query: 209 PRSDVFPFLDRVVYLCLGDVVYAGPTRNLLD 239 + DR++ + G V +G L++ Sbjct: 1292 --PSLMKLADRIIVMDSGIVKESGSFDELMN 1320 >SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr 1|||Manual Length = 487 Score = 50.4 bits (115), Expect = 7e-07 Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 1/108 (0%) Query: 126 SSKVKQVMADMALSQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTY 185 S V++ + LS + + NL+ + RR ++ +L++ P +LLLDEP LD + Sbjct: 126 SQHVQEAASMTQLSHLLPSSLINLSNGQSRRAMLASKLVQRPQLLLLDEPYAGLDVTSRS 185 Query: 186 LVISILSNAAKKYGTAIILTMEKPRSDVFPFLDRVVYLCLGDVVYAGP 233 ++ S+L + I+L++ +P+ + F+ V+ L + Y GP Sbjct: 186 VLSSLLGEMSNHCSPKIVLSL-RPQDKIPDFITHVLELKNKKITYQGP 232 Score = 35.9 bits (79), Expect = 0.016 Identities = 35/185 (18%), Positives = 81/185 (43%), Gaps = 17/185 (9%) Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVP----------SKGHVLLEGVPLE 86 +L D+++T GE A+ GS GSGK LL + P K G+ + Sbjct: 279 VLSDINWTIREGERWALTGSNGSGKTTLLAYVVGDHPKLFASNIKFFGKSIGPGTGISIF 338 Query: 87 EEQFNI-NCALVRHS-----TRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMADMALSQ 140 + Q NI +C+ H+ L + ++ K++ + + + ++ + L Sbjct: 339 DIQENIGHCSPEIHNHFPKQHTCFEALLSAWSTTFTIPKLT-ETRLAAISSILEEFELKD 397 Query: 141 VANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGT 200 + +K +++++ R ++ +++ P +++LDEP +D ++ + L+ Sbjct: 398 IKDKPLSSISVGMQRFILFCRAIVKQPRLVVLDEPFQGVDTKYVHMAHNYLNEKLSPSQA 457 Query: 201 AIILT 205 +I++ Sbjct: 458 MVIIS 462 >SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Schizosaccharomyces pombe|chr 2|||Manual Length = 726 Score = 47.6 bits (108), Expect = 5e-06 Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 13/155 (8%) Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIAR-RVPSKGHVLLEGVPLEE---EQFNI 92 I ++SF H G AI+ G GK + ++ R PS G +L +GV + Q+ Sbjct: 499 IFDNLSFDIHPGTNVAIVAPSGGGKSTISQLLLRFYAPSSGKILADGVDISTYNVHQWRS 558 Query: 93 NCALVRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMADMALS-------QVANKC 145 + LV L G ++ + +A + S K+ LS QV + Sbjct: 559 HFGLVGQEPVLFSG-TIGENIAYGKSNASQEEIEDAAKRANCSFVLSFPEKWSTQVGTRG 617 Query: 146 VTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLD 180 + L+ + +R+ I L+R+P L+LDE T LD Sbjct: 618 L-QLSGGQKQRIAIARALLRNPAFLILDEATSALD 651 >SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar membrane transporter Hmt1|Schizosaccharomyces pombe|chr 3|||Manual Length = 830 Score = 45.6 bits (103), Expect = 2e-05 Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 24/217 (11%) Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVP-SKGHVLLEGVPLEEEQFNINCA 95 +L D++F G+V A++G G GK ++ ++ R + G + ++ +++ N+ + Sbjct: 599 VLSDINFVAQPGKVIALVGESGGGKSTIMRILLRFFDVNSGSITID----DQDIRNVTLS 654 Query: 96 LVRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKCVT-------- 147 +R S ++P S + L I S+ +++ A +Q+ ++ + Sbjct: 655 SLRSSIGVVPQDSTLFNDTI-LYNIKYAKPSATNEEIYAAAKAAQIHDRILQFPDGYNSR 713 Query: 148 ------NLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTA 201 L+ E +R+ + +++DP I+LLDE T LD NT I N TA Sbjct: 714 VGERGLKLSGGEKQRVAVARAILKDPSIILLDEATSALD-TNTERQIQAALNRLASGRTA 772 Query: 202 IILTMEKPRSDVFPFLDRVVYLCLGDVVYAGPTRNLL 238 I++ R D ++ + G +V G L+ Sbjct: 773 IVIA---HRLSTITNADLILCISNGRIVETGTHEELI 806 >SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizosaccharomyces pombe|chr 1|||Manual Length = 280 Score = 38.7 bits (86), Expect = 0.002 Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 11/205 (5%) Query: 33 KTGVILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSK-GHVLLEGV-PLEEEQF 90 K + L V+ G T ++G+ G+GK LL +++ + +K GH+ + G P E Sbjct: 15 KQPLSLDHVTLDLPKGSRTLLVGANGAGKSTLLKLLSGKSLAKAGHISVGGKDPFRES-- 72 Query: 91 NINCALVRHSTRLL--PGLSVQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKCVTN 148 + A V T + P + ++A + + G K ++ + + + + + + Sbjct: 73 --SSAFVYLGTEWVNNPVIHRDMSVARLIASVGGD-KFAERRDFLISILDIDLRWR-MHA 128 Query: 149 LTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILTMEK 208 ++ E RR+ + + L+R +LLLDE T DLD L +++ L + I+ Sbjct: 129 VSDGERRRVQLCMGLLRPFEVLLLDEVTVDLDVLARADLLNFLQEETEVRNATIVYATH- 187 Query: 209 PRSDVFPFLDRVVYLCLGDVVYAGP 233 + + +V+L LG +V GP Sbjct: 188 IFDGLAEWPTHLVHLSLGRIVDYGP 212 >SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc2|Schizosaccharomyces pombe|chr 1|||Manual Length = 1463 Score = 36.7 bits (81), Expect = 0.009 Identities = 47/219 (21%), Positives = 96/219 (43%), Gaps = 15/219 (6%) Query: 36 VILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRV-PSKGHVLLEGVPLEE---EQFN 91 ++L D+S E I+G G+GK L + R + P+ G + L+ + + Sbjct: 1239 LVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALFRLIEPTSGDIQLDDINITSIGLHDLR 1298 Query: 92 INCALVRHSTRLLPGLSVQQTLALSLT----KISGYLKSSKVKQVM--ADMALSQVANKC 145 A++ + G ++++ L + +I L+++ +KQ + D L + Sbjct: 1299 SRLAIIPQENQAFEG-TIRENLDPNANATDEEIWHALEAASLKQFIQTLDGGLYSRVTEG 1357 Query: 146 VTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIILT 205 NL+ + + + + L+ +LLLDE T +D + T ++ +++ ILT Sbjct: 1358 GANLSSGQRQLMCLTRALLTPTRVLLLDEATAAVD-VETDAIVQ--RTIRERFNDRTILT 1414 Query: 206 MEKPRSDVFPFLDRVVYLCLGDVVYAGPTRNLLDYFGSI 244 + R + +R++ L G VV T+ LL+ S+ Sbjct: 1415 IAH-RINTVMDSNRILVLDHGKVVEFDSTKKLLENKASL 1452 Score = 31.9 bits (69), Expect = 0.26 Identities = 15/49 (30%), Positives = 25/49 (51%) Query: 18 QVEPGSFFQRLTGGVKTGVILKDVSFTTHSGEVTAILGSKGSGKRALLD 66 +++ G+F G L+D+ F GE+ I+G G GK +LL+ Sbjct: 579 EIKKGTFSWSGPGQNAAEPTLRDIDFVARRGELCCIVGKVGMGKSSLLE 627 >SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosaccharomyces pombe|chr 2|||Manual Length = 618 Score = 33.1 bits (72), Expect = 0.11 Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 12/148 (8%) Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVI-ARRVPSKGHV-LLEGVPLEEEQFNINC 94 + +D+SF AI+G G+GK LL++I +P +G+V G+ + + Sbjct: 405 LYRDLSFGIDMDSRVAIVGKNGTGKSTLLNLITGLLIPIEGNVSRYSGLKMAKYS----- 459 Query: 95 ALVRHSTRLLP-GLSVQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKC-VTNLTKS 152 +HS LP S + + + + + + V+ LS + + L+ Sbjct: 460 ---QHSADQLPYDKSPLEYIMDTYKPKFPERELQQWRSVLGKFGLSGLHQTSEIRTLSDG 516 Query: 153 EYRRLVIGVQLIRDPIILLLDEPTWDLD 180 R+V + P ILLLDEPT LD Sbjct: 517 LKSRVVFAALALEQPHILLLDEPTNHLD 544 Score = 29.1 bits (62), Expect = 1.8 Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 23/189 (12%) Query: 36 VILKDVSFTTHSGEVTAILGSKGSGKRALLD-VIARRVPSKGHVLLEGVPLEEEQFNINC 94 +++++ + + G+ +LG GSGK L+ V AR V H+ + E E ++N Sbjct: 89 LLIENATIELNHGQRYGLLGDNGSGKSTFLESVAARDVEYPEHIDSYLLNAEAEPSDVNA 148 Query: 95 A--LVRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQV----------MADMAL---- 138 +++ + + L + + + L SK +++ A M L Sbjct: 149 VDYIIQSAKDKVQKLEAEIEELSTADDVDDVLLESKYEELDDMDPSTFEAKAAMILHGLG 208 Query: 139 --SQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAK 196 ++ K +++ R+ + L P +LLLDEPT LD + L N Sbjct: 209 FTQEMMAKPTKDMSGGWRMRVALSRALFIKPSLLLLDEPTNHLD----LEAVVWLENYLA 264 Query: 197 KYGTAIILT 205 KY +++T Sbjct: 265 KYDKILVVT 273 >SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr 2|||Manual Length = 1465 Score = 32.3 bits (70), Expect = 0.19 Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Query: 18 QVEPGSF-FQRLTGGVKTGVILKDVSFTTHSGEVTAILGSKGSGKRALLD 66 +++ G+F + + T + L+ ++F +GE+T I G G+GK +LL+ Sbjct: 576 EIKSGTFSWSKKTLKQQVTPTLRQINFVAKNGELTCIFGKVGAGKSSLLE 625 >SPCC417.08 |tef3||translation elongation factor eEF3|Schizosaccharomyces pombe|chr 3|||Manual Length = 1047 Score = 32.3 bits (70), Expect = 0.19 Identities = 19/65 (29%), Positives = 34/65 (52%) Query: 129 VKQVMADMALSQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVI 188 VK + + ++ N + +L+ +L + + ++P ILLLDEPT LD +N + Sbjct: 529 VKALKENSFTDELINMPIGSLSGGWKMKLALTRAMFKNPDILLLDEPTNHLDVVNVAWLE 588 Query: 189 SILSN 193 + L N Sbjct: 589 NFLVN 593 Score = 28.3 bits (60), Expect = 3.2 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRALLDVI-ARRVPSKGHV 78 L D+SF A++G G+GK L+ V+ +P+ G + Sbjct: 690 LNDISFQVSLSSRIAVIGPNGAGKSTLIKVLTGELLPTVGEI 731 >SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces pombe|chr 1|||Manual Length = 734 Score = 31.9 bits (69), Expect = 0.26 Identities = 18/56 (32%), Positives = 29/56 (51%) Query: 148 NLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAII 203 +L K EY R V IR+ + DEP W + N++L+ I + ++G AI+ Sbjct: 420 HLRKGEYSRFPYSVLEIRECVRYDEDEPLWISELRNSHLISEIDGFSKYEHGVAIL 475 >SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|Schizosaccharomyces pombe|chr 1|||Manual Length = 1469 Score = 31.1 bits (67), Expect = 0.45 Identities = 50/215 (23%), Positives = 87/215 (40%), Gaps = 24/215 (11%) Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRAL-LDVIARRVPSKGHVLLEGVPLEEEQFNINCA 95 ILKDV+ + E A++G GSGK L L ++ G + + G E + N+N Sbjct: 1228 ILKDVNLHINPSEKVAVVGRTGSGKSTLGLTLLRFTHRISGEIYING--RETQSVNLNAL 1285 Query: 96 LVRHS----TRLLPGLSVQQTL-------------ALSLTKISGYLKSSKVKQVMADMAL 138 R S +L +V+ L AL + S + + Q + L Sbjct: 1286 RQRISFIPQDPILFSGTVRSNLDPFDELEDNFLNEALKTSGASSMIMAHTDDQKPIHITL 1345 Query: 139 SQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKY 198 +N ++ + + L + ++R I++LDE T +D + L A + Sbjct: 1346 DTHVASEGSNFSQGQKQVLALARAIVRRSKIIILDECTASVDDAMDQKIQKTLREA---F 1402 Query: 199 GTAIILTMEKPRSDVFPFLDRVVYLCLGDVVYAGP 233 G A +L + + + D+V+ L G +V GP Sbjct: 1403 GDATMLCIAHRLKTIVDY-DKVMVLDKGVLVEYGP 1436 >SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1057 Score = 30.7 bits (66), Expect = 0.59 Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 18/153 (11%) Query: 36 VILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPLEEEQFNINCA 95 ++L + + G ++G G GK LL I G +E P +E + Sbjct: 458 LLLSHTNLHLYRGHRYGVVGHNGCGKSTLLRAI-------GDYKVENFPSPDE---VKTC 507 Query: 96 LVRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMADMALS-----QVANKCVTNLT 150 V HS L G + + + L + +Q AD S ++ V +L+ Sbjct: 508 FVAHS---LQGEDTSMAILDFVAQDKALLTMNVTRQEAADALHSVGFTAEMQENPVASLS 564 Query: 151 KSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLN 183 +L + +++ ILLLDEPT LD N Sbjct: 565 GGWKMKLELARAMLQKADILLLDEPTNHLDVAN 597 Score = 26.6 bits (56), Expect = 9.6 Identities = 13/35 (37%), Positives = 23/35 (65%) Query: 146 VTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLD 180 +++L+ + ++VI L +P +L+LDEPT LD Sbjct: 908 ISSLSGGQKVKVVIAACLWNNPQLLVLDEPTNFLD 942 >SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosaccharomyces pombe|chr 3|||Manual Length = 822 Score = 30.3 bits (65), Expect = 0.78 Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 13/167 (7%) Query: 17 GQVEPGSFFQRLTGGVKTG-VILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRV-PS 74 G P FQ ++ G I ++F A++G G+GK L+ +I +V PS Sbjct: 588 GIPSPAIKFQDVSFNYPGGPTIFSKLNFGLDLKSRVALVGPNGAGKTTLIKLILEKVQPS 647 Query: 75 KGHVLLEGVPLEEEQFNINCALVRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMA 134 G V+ L FN + +L LS + L TK G ++++++ Sbjct: 648 TGSVVRHH-GLRLALFNQHMG-----DQLDMRLSAVEWLR---TKF-GNKPEGEMRRIVG 697 Query: 135 DMALSQVANKC-VTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLD 180 L+ + + L+ + RR++ + P ILLLDEPT LD Sbjct: 698 RYGLTGKSQVIPMGQLSDGQRRRVLFAFLGMTQPHILLLDEPTNALD 744 >SPBC1105.05 |exg1||glucan 1,3-beta-glucosidase I/II precursor|Schizosaccharomyces pombe|chr 2|||Manual Length = 407 Score = 29.9 bits (64), Expect = 1.0 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 4/57 (7%) Query: 138 LSQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNA 194 ++ VANK T+S+Y +VIG++ + +P+ LD L+ Y +++ LS++ Sbjct: 189 ITYVANK----YTQSQYASVVIGIETVNEPLGYGLDMDQLKQYDLDAYNIVNPLSSS 241 >SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 593 Score = 29.5 bits (63), Expect = 1.4 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 115 LSLTKI-SGYLKSSKVKQVMADMALSQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLD 173 L L KI + +L +V +++ + ++ V NL+ E +R+ I + L + L+D Sbjct: 421 LFLKKIRAAFLNGKFQSEVCKPLSIDNIIDQEVLNLSGGELQRVAICLALGMPADVYLID 480 Query: 174 EPTWDLD 180 EP+ LD Sbjct: 481 EPSAYLD 487 >SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1427 Score = 29.1 bits (62), Expect = 1.8 Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 29/222 (13%) Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRAL-LDVIARRVPSKGHVLLEGVPLEEEQFNINCA 95 +L+D++ E AI+G GSGK + L ++ + G V ++G+ + +++ Sbjct: 1196 VLEDINLEILPKEKIAIVGRTGSGKSTMGLTLLRFTMIMSGAVEVDGIDIN----SLDLE 1251 Query: 96 LVRHSTRLLPG--LSVQQTLALSLTKISGYLKS--SKVKQVMADMALSQVANKCV----- 146 ++R L+P + + T+ +L Y +++ + + +L Q +NK Sbjct: 1252 VLRQRISLIPQDPVLISGTVRSNLDPFEEYGDGELNEILKTASCESLVQASNKNSLDAFA 1311 Query: 147 -----------TNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAA 195 N + + + L + L+R I++LDE T +D + +L AA Sbjct: 1312 IHLDTPVDSGGVNFSSGQRQILALARALVRKSRIVILDESTASVDDTTDRRIQQML-RAA 1370 Query: 196 KKYGTAIILTMEKPRSDVFPFLDRVVYLCLGDVVYAGPTRNL 237 K+ T + + R D+V+ L G V G ++L Sbjct: 1371 FKHATVLCIA---HRIKTIVDYDKVLVLDSGKTVEFGSPKSL 1409 Score = 28.7 bits (61), Expect = 2.4 Identities = 12/27 (44%), Positives = 18/27 (66%) Query: 38 LKDVSFTTHSGEVTAILGSKGSGKRAL 64 LK+++FT + T ++GS GSGK L Sbjct: 597 LKNLNFTIPRNQFTLVVGSTGSGKSTL 623 >SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pombe|chr 2|||Manual Length = 736 Score = 28.7 bits (61), Expect = 2.4 Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 12/168 (7%) Query: 37 ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHVLLEGVPLEEEQFNINCAL 96 ILK V ++G G+GK +L ++ ++ G+ + I Sbjct: 533 ILKHVDIDVQMDSRIGVVGPNGAGKSTMLKLLIEQLHPTS-----GIVSRHPRLRIAYFA 587 Query: 97 VRHSTRLLPGLSVQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKCVTNLTKSEYRR 156 H L L+ LA + G + + + A +A + + L+ + R Sbjct: 588 QHHVDTLDLNLNALSFLAKTFP---GKGEEEYRRHLGAFGVSGPLALQKMITLSGGQKSR 644 Query: 157 LVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYGTAIIL 204 + +++P IL+LDEPT LD + + L+ A K++ +IL Sbjct: 645 VAFACLGLQNPHILILDEPTNHLDMES----MDALTRAVKRFQGGVIL 688 Score = 27.9 bits (59), Expect = 4.2 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 6/96 (6%) Query: 117 LTKISGYLKSSKVKQVMADMALSQVANKCVTNLTKSEYR-RLVIGVQLIRDPIILLLDEP 175 L+++ S+ ++A + +Q T +R RL + L P +LLLDEP Sbjct: 322 LSEMDSDRAESRAATILAGLGFTQEMQSHATKTFSGGWRMRLSLARALFCQPDLLLLDEP 381 Query: 176 TWDLDPLNTYLVISILSNAAKKYGTAIILTMEKPRS 211 + LD + I+ LS + Y I+L + RS Sbjct: 382 SNMLDVPS----IAFLSEYLQTYKN-IVLVVSHDRS 412 >SPBC1A4.02c |leu1|SPBC1E8.07c|3-isopropylmalate dehydrogenase Leu1|Schizosaccharomyces pombe|chr 2|||Manual Length = 371 Score = 27.1 bits (57), Expect = 7.3 Identities = 14/40 (35%), Positives = 21/40 (52%) Query: 136 MALSQVANKCVTNLTKSEYRRLVIGVQLIRDPIILLLDEP 175 +A S++ K V + K EY L + QLI +LL+ P Sbjct: 195 LATSRLWRKTVAKIFKEEYPHLTLKNQLIDSAAMLLVKSP 234 >SPAC823.13c |||mitochondrial inner membrane protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 317 Score = 26.6 bits (56), Expect = 9.6 Identities = 15/50 (30%), Positives = 25/50 (50%) Query: 259 LCLSTVDRRSRERFIESNHQIAALVEKFKIEGQAIMQGNLHENNRIVNPN 308 L VD +ER +E N ++ + EK +G+A+ Q + +I N N Sbjct: 194 LVREAVDHIDKERELEINDELKKISEKLDKKGEAVGQALELTSPKIDNKN 243 >SPBC4.02c |||conserved fungal protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 456 Score = 26.6 bits (56), Expect = 9.6 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 6/75 (8%) Query: 437 AAIVNLYITCIYVMLASGVLRSY---KGFEDWLHYL---TYITHTRYASIFLHRTVFKQP 490 A I +LY T +YV +++G+++S G + W +I T + +K+P Sbjct: 370 ADIPSLYGTILYVSMSTGIVKSEIGDIGAQQWKTLAPSERWILRTNIRKECTYDIRYKRP 429 Query: 491 TFNILPYSDHENCTG 505 + L YSD + G Sbjct: 430 YVSSLKYSDDDLTAG 444 >SPBP8B7.12c |fta3|sma3|Sim4 and Mal2 associated |Schizosaccharomyces pombe|chr 2|||Manual Length = 220 Score = 26.6 bits (56), Expect = 9.6 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 3/50 (6%) Query: 103 LLPGL-SVQQTLALSLTKISGYLKSSKVKQVMADMALSQVANKCVTNLTK 151 LLP + S+ +L L +K S Y S ++ V+AD+ L++ + V N+T+ Sbjct: 140 LLPSVQSISSSLELYASKESDY--RSSIEGVLADLKLARARWEIVRNVTQ 187 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.326 0.141 0.427 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,611,776 Number of Sequences: 5004 Number of extensions: 109117 Number of successful extensions: 365 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 310 Number of HSP's gapped (non-prelim): 53 length of query: 590 length of database: 2,362,478 effective HSP length: 77 effective length of query: 513 effective length of database: 1,977,170 effective search space: 1014288210 effective search space used: 1014288210 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.6 bits) S2: 56 (26.6 bits)
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