GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000472-TA|BGIBMGA000472-PA|IPR003439|ABC transporter
related
         (590 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...   121   5e-29
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...   121   5e-29
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...   121   5e-29
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    27   1.4  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score =  121 bits (292), Expect = 5e-29
 Identities = 71/240 (29%), Positives = 122/240 (50%), Gaps = 18/240 (7%)

Query: 37  ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHV------LLEGVPLEEEQF 90
           +LK+V+    SGE+ A++GS G+GK  LL+ +A R P    +       L GVP+  EQ 
Sbjct: 115 LLKNVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALNGVPVNAEQL 174

Query: 91  NINCALVRHSTRLLPGLSVQQTLALSLT-----KISGYLKSSKVKQVMADMALSQVANKC 145
              CA V+     +P L+ ++ L           +   +K  +V++V+ +++L + A+  
Sbjct: 175 RARCAYVQQDDLFIPSLTTREHLLFQAMLRMGRDVPASVKQHRVQEVLQELSLVKCADTI 234

Query: 146 V------TNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYG 199
           +        L+  E +RL    + + DP +LL DEPT  LD    + V+ +L   A K G
Sbjct: 235 IGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLDSFMAHSVLQVLKGMAMK-G 293

Query: 200 TAIILTMEKPRSDVFPFLDRVVYLCLGDVVYAGPTRNLLDYFGSIGFPCPQLENPLMYYL 259
             IILT+ +P S+++   D+++ +  G V + G      ++F  +G PCP   NP  +Y+
Sbjct: 294 KTIILTIHQPSSELYCLFDKILLVAEGRVAFLGSPYQSAEFFSQLGIPCPPNYNPADFYV 353


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score =  121 bits (292), Expect = 5e-29
 Identities = 71/240 (29%), Positives = 122/240 (50%), Gaps = 18/240 (7%)

Query: 37  ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHV------LLEGVPLEEEQF 90
           +LK+V+    SGE+ A++GS G+GK  LL+ +A R P    +       L GVP+  EQ 
Sbjct: 115 LLKNVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALNGVPVNAEQL 174

Query: 91  NINCALVRHSTRLLPGLSVQQTLALSLT-----KISGYLKSSKVKQVMADMALSQVANKC 145
              CA V+     +P L+ ++ L           +   +K  +V++V+ +++L + A+  
Sbjct: 175 RARCAYVQQDDLFIPSLTTREHLLFQAMLRMGRDVPASVKQHRVQEVLQELSLVKCADTI 234

Query: 146 V------TNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYG 199
           +        L+  E +RL    + + DP +LL DEPT  LD    + V+ +L   A K G
Sbjct: 235 IGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLDSFMAHSVLQVLKGMAMK-G 293

Query: 200 TAIILTMEKPRSDVFPFLDRVVYLCLGDVVYAGPTRNLLDYFGSIGFPCPQLENPLMYYL 259
             IILT+ +P S+++   D+++ +  G V + G      ++F  +G PCP   NP  +Y+
Sbjct: 294 KTIILTIHQPSSELYCLFDKILLVAEGRVAFLGSPYQSAEFFSQLGIPCPPNYNPADFYV 353


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score =  121 bits (292), Expect = 5e-29
 Identities = 71/240 (29%), Positives = 122/240 (50%), Gaps = 18/240 (7%)

Query: 37  ILKDVSFTTHSGEVTAILGSKGSGKRALLDVIARRVPSKGHV------LLEGVPLEEEQF 90
           +LK+V+    SGE+ A++GS G+GK  LL+ +A R P    +       L GVP+  EQ 
Sbjct: 93  LLKNVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALNGVPVNAEQL 152

Query: 91  NINCALVRHSTRLLPGLSVQQTLALSLT-----KISGYLKSSKVKQVMADMALSQVANKC 145
              CA V+     +P L+ ++ L           +   +K  +V++V+ +++L + A+  
Sbjct: 153 RARCAYVQQDDLFIPSLTTREHLLFQAMLRMGRDVPASVKQHRVQEVLQELSLVKCADTI 212

Query: 146 V------TNLTKSEYRRLVIGVQLIRDPIILLLDEPTWDLDPLNTYLVISILSNAAKKYG 199
           +        L+  E +RL    + + DP +LL DEPT  LD    + V+ +L   A K G
Sbjct: 213 IGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLDSFMAHSVLQVLKGMAMK-G 271

Query: 200 TAIILTMEKPRSDVFPFLDRVVYLCLGDVVYAGPTRNLLDYFGSIGFPCPQLENPLMYYL 259
             IILT+ +P S+++   D+++ +  G V + G      ++F  +G PCP   NP  +Y+
Sbjct: 272 KTIILTIHQPSSELYCLFDKILLVAEGRVAFLGSPYQSAEFFSQLGIPCPPNYNPADFYV 331


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 27.1 bits (57), Expect = 1.4
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 10/96 (10%)

Query: 380 PFSEIFIVYCKFLRSRILADISESLDYIHFSLVLWS-SYIYAE-QQAIAIMVFVKNGLNA 437
           P SEIFI         IL+ IS +  Y+     LW+ S  +AE  + +  MVF     N 
Sbjct: 683 PMSEIFIHQAIHTIEYILSTISHTASYLR----LWALSLAHAELSEVLYNMVFTIGLRND 738

Query: 438 AIVNLYITCI----YVMLASGVLRSYKGFEDWLHYL 469
           + V   +  +    + +L  G+L   +G   +LH L
Sbjct: 739 SYVGAIMIWLVFWPWSVLTIGILVGMEGLSAFLHTL 774


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.326    0.141    0.427 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,335
Number of Sequences: 2123
Number of extensions: 23388
Number of successful extensions: 100
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 88
Number of HSP's gapped (non-prelim): 4
length of query: 590
length of database: 516,269
effective HSP length: 68
effective length of query: 522
effective length of database: 371,905
effective search space: 194134410
effective search space used: 194134410
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 50 (24.2 bits)