Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000471-TA|BGIBMGA000471-PA|undefined
(204 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cycl... 29 1.8
U41547-4|AAA83194.3| 376|Caenorhabditis elegans Hypothetical pr... 29 3.1
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 29 3.1
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 29 3.1
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 28 5.4
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 27 7.1
U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated p... 27 7.1
U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated p... 27 7.1
U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated p... 27 7.1
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 27 7.1
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 27 7.1
Z82287-3|CAB05313.3| 772|Caenorhabditis elegans Hypothetical pr... 27 9.4
>AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cyclase
protein 17 protein.
Length = 1146
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 71 NICCLLKDETIYCELVQWSEDCVSNECTILAQYLGALNDVLF 112
N+ ++KDE C EDCV E + +A+Y G L D +
Sbjct: 282 NVIEMMKDEPFNCV-----EDCVGEEYSSVAKYAGQLADAFY 318
>U41547-4|AAA83194.3| 376|Caenorhabditis elegans Hypothetical
protein F22A3.1 protein.
Length = 376
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 111 LFPPNMCSNDGVDLLMRRSKDFPGIL 136
L PP CS G+DLL KDF IL
Sbjct: 105 LQPPRNCSITGIDLLGMSQKDFEMIL 130
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 83 CELVQWSEDCVSNECTILAQYLGALNDVLFPPNMCSN 119
CE+V S+ + CT L + ++ L PN+C N
Sbjct: 645 CEIVSESDGILEARCTHLTDFAIIVDAALNDPNVCDN 681
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 83 CELVQWSEDCVSNECTILAQYLGALNDVLFPPNMCSN 119
CE+V S+ + CT L + ++ L PN+C N
Sbjct: 627 CEIVSESDGILEARCTHLTDFAIIVDAALNDPNVCDN 663
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/49 (30%), Positives = 20/49 (40%)
Query: 105 GALNDVLFPPNMCSNDGVDLLMRRSKDFPGILSPKIEIATKVRIDEVWN 153
G N V+ NM + DG+ + RS FP E K + WN
Sbjct: 567 GERNGVIIAENMTAKDGIGKIQPRSLPFPYSRVEDYEAVLKQPLGLEWN 615
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 77 KDETIYCELVQWSEDCVSNECTILAQYLGALNDVLFPPNMCSNDGV 122
K + ELV+ +D V + +++ Y+G LN + P ++ D +
Sbjct: 1809 KRSYVLMELVETEQDYVKDLTSVVEGYIGNLNKMDLPADLVGKDKI 1854
>U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated
protein 73, isoform d protein.
Length = 552
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 77 KDETIYCELVQWSEDCVSNECTILAQYLGALNDVLFPPNMCSNDGV 122
K + ELV+ +D V + +++ Y+G LN + P ++ D +
Sbjct: 163 KRSYVLMELVETEQDYVKDLTSVVEGYIGNLNKMDLPADLVGKDKI 208
>U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated
protein 73, isoform e protein.
Length = 633
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 77 KDETIYCELVQWSEDCVSNECTILAQYLGALNDVLFPPNMCSNDGV 122
K + ELV+ +D V + +++ Y+G LN + P ++ D +
Sbjct: 244 KRSYVLMELVETEQDYVKDLTSVVEGYIGNLNKMDLPADLVGKDKI 289
>U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated
protein 73, isoform c protein.
Length = 928
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 77 KDETIYCELVQWSEDCVSNECTILAQYLGALNDVLFPPNMCSNDGV 122
K + ELV+ +D V + +++ Y+G LN + P ++ D +
Sbjct: 249 KRSYVLMELVETEQDYVKDLTSVVEGYIGNLNKMDLPADLVGKDKI 294
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 77 KDETIYCELVQWSEDCVSNECTILAQYLGALNDVLFPPNMCSNDGV 122
K + ELV+ +D V + +++ Y+G LN + P ++ D +
Sbjct: 1809 KRSYVLMELVETEQDYVKDLTSVVEGYIGNLNKMDLPADLVGKDKI 1854
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 77 KDETIYCELVQWSEDCVSNECTILAQYLGALNDVLFPPNMCSNDGV 122
K + ELV+ +D V + +++ Y+G LN + P ++ D +
Sbjct: 1809 KRSYVLMELVETEQDYVKDLTSVVEGYIGNLNKMDLPADLVGKDKI 1854
>Z82287-3|CAB05313.3| 772|Caenorhabditis elegans Hypothetical
protein ZK550.3 protein.
Length = 772
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 40 YQTCMLPPIFPLTFKDVFYFRKRFQETCALN 70
YQ C PIF L Y+RK + E AL+
Sbjct: 672 YQPCSFTPIFALQPHMSMYYRKLWAEMLALD 702
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.325 0.139 0.453
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,071,474
Number of Sequences: 27539
Number of extensions: 217250
Number of successful extensions: 573
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 562
Number of HSP's gapped (non-prelim): 12
length of query: 204
length of database: 12,573,161
effective HSP length: 78
effective length of query: 126
effective length of database: 10,425,119
effective search space: 1313564994
effective search space used: 1313564994
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -