Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000470-TA|BGIBMGA000470-PA|IPR002933|Peptidase M20,
IPR011650|Peptidase dimerisation, IPR010159|N-acyl-L-amino-acid
amidohydrolase, IPR001261|ArgE/dapE/ACY1/CPG2/yscS
(398 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39672| Best HMM Match : Peptidase_M20 (HMM E-Value=9.9e-09) 73 5e-13
SB_25210| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.71
SB_41890| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_46439| Best HMM Match : RVT_1 (HMM E-Value=4.8e-25) 29 6.6
SB_37431| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.7
SB_31972| Best HMM Match : RVT_1 (HMM E-Value=2.4e-14) 29 8.7
SB_22188| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.7
SB_19553| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.7
SB_17670| Best HMM Match : RVT_1 (HMM E-Value=6.1e-25) 29 8.7
SB_56337| Best HMM Match : RVT_1 (HMM E-Value=1.7e-23) 29 8.7
SB_49175| Best HMM Match : RVT_1 (HMM E-Value=1.8e-32) 29 8.7
SB_21016| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.7
SB_20252| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.7
SB_17781| Best HMM Match : RVT_1 (HMM E-Value=1.3e-24) 29 8.7
>SB_39672| Best HMM Match : Peptidase_M20 (HMM E-Value=9.9e-09)
Length = 702
Score = 72.5 bits (170), Expect = 5e-13
Identities = 44/172 (25%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 2 AAWENDEEIMRFREYLKIPSVQPDVDYSACVEFLTAQ-ARLMNLPVMVYEIVPKKPVVVV 60
+A E + +R+R P + EF+ + + + + P++ +E++ +++
Sbjct: 392 SALERFSQALRYRTVAWGPGDYNRTELLKFKEFILREFSYVFHHPLVTFEVINNYSLLI- 450
Query: 61 TLQGLQPDLPSILLNSHMDVVPVNEELWTYPPFEAKLTDDGFIYARGSQDMKSTGMIYLE 120
+ G L ++ SH+DVVP W PPF+ ++ D G+I+ RG+ D+K+ M LE
Sbjct: 451 QVHGSNSTLRPYMIASHLDVVPAPGS-WDVPPFDGRVKD-GYIWGRGTLDVKNGVMASLE 508
Query: 121 AISRFNKSGKRLKRTTHVSFVPDEEIGSTYGMKAFSESQEFKNLNVGFGMDE 172
A+ K G++ KR+ ++++ DEE+ G + + +N+ + F +DE
Sbjct: 509 AVQALLKLGQKPKRSFYLAYGHDEEVQGADGARNIGMLLKARNIKLEFIVDE 560
>SB_25210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 32.3 bits (70), Expect = 0.71
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 348 FVRLHNIPVINFTPILNTPLYVHAHNERVHADMYKKGIDI 387
+VR+HN+ V + + N +YV HN RVH M+ + +
Sbjct: 29 YVRMHNVRV--YVRMQNVRVYVRMHNVRVHVRMHNVRVHV 66
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 348 FVRLHNIPVINFTPILNTPLYVHAHNERVHADM 380
+VR+HN+ V + + N +YV HN RV+ M
Sbjct: 11 YVRMHNVRV--YVRMQNVRVYVRMHNVRVYVRM 41
>SB_41890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 188 ERTSRQVKVTCKGEPGHGALLDIDNAGEKFYTILSKFMSLRAEEKRKTLPPINTFIGDVT 247
E+T R++ +G L D+++ K+ T+ +KF +R + +K T G++
Sbjct: 63 EKTCRELDQATQGTNYAKLLRDLEHFKTKWETVHTKFAHVRDQPMKKLGSEFETVTGELL 122
Query: 248 TINLTQVEGGV 258
T L ++ GV
Sbjct: 123 T-QLDKISRGV 132
>SB_46439| Best HMM Match : RVT_1 (HMM E-Value=4.8e-25)
Length = 1641
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 127 KSGKRLKRTTHVSFVPDEEIGSTYGMKAFSESQEFKNLNVGFGMDESAP 175
++ K +KR HV+ E IG G K FS+ +LN G+ E AP
Sbjct: 983 QANKAIKRERHVTPTIKEMIGDLNGAKFFSK----LDLNQGYNQPELAP 1027
>SB_37431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 643
Score = 28.7 bits (61), Expect = 8.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 127 KSGKRLKRTTHVSFVPDEEIGSTYGMKAFSESQEFKNLNVGFGMDESAP 175
++ K +KR HV+ E IG G K FS+ +LN G+ E AP
Sbjct: 38 QANKAIKRERHVTPTIKEMIGDLNGAKVFSK----LDLNQGYNQLELAP 82
>SB_31972| Best HMM Match : RVT_1 (HMM E-Value=2.4e-14)
Length = 1242
Score = 28.7 bits (61), Expect = 8.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 127 KSGKRLKRTTHVSFVPDEEIGSTYGMKAFSESQEFKNLNVGFGMDESAP 175
++ K +KR HV+ E IG G K FS+ +LN G+ E AP
Sbjct: 466 QANKAIKRERHVTPTIKEMIGDLNGAKVFSK----LDLNQGYNQLELAP 510
>SB_22188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1046
Score = 28.7 bits (61), Expect = 8.7
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 56 PVVVVTLQGLQPDLPSILLNSHMDVVPVNEELW-TYPPFEAKLT 98
P++ + L GL DLP++L D + LW T+P A LT
Sbjct: 433 PILAIGLSGLFSDLPTLLDIPSEDWYSLERGLWATFPELVAFLT 476
>SB_19553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1744
Score = 28.7 bits (61), Expect = 8.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 127 KSGKRLKRTTHVSFVPDEEIGSTYGMKAFSESQEFKNLNVGFGMDESAP 175
++ K +KR HV+ E IG G K FS+ +LN G+ E AP
Sbjct: 963 QANKAIKRECHVTPTIKEMIGDLNGAKVFSK----LDLNQGYNQLELAP 1007
>SB_17670| Best HMM Match : RVT_1 (HMM E-Value=6.1e-25)
Length = 1271
Score = 28.7 bits (61), Expect = 8.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 127 KSGKRLKRTTHVSFVPDEEIGSTYGMKAFSESQEFKNLNVGFGMDESAP 175
++ K +KR HV+ E IG G K FS+ +LN G+ E AP
Sbjct: 459 QANKAIKRERHVTPTIKEMIGDLNGAKVFSK----LDLNQGYNQLELAP 503
>SB_56337| Best HMM Match : RVT_1 (HMM E-Value=1.7e-23)
Length = 846
Score = 28.7 bits (61), Expect = 8.7
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 112 KSTGMIYLEAISRFNKSGKRLKRTTHVSFVPDEEIGSTYGMKAFSESQEFKNLNVGFGMD 171
KS G +++ R ++ K +KR HV+ + IG G K FS+ +LN G+
Sbjct: 357 KSPGKVHVCVDMR--QANKAIKRERHVTPTIKDMIGDLNGAKVFSK----LDLNQGYNQL 410
Query: 172 ESAP 175
E AP
Sbjct: 411 ELAP 414
>SB_49175| Best HMM Match : RVT_1 (HMM E-Value=1.8e-32)
Length = 823
Score = 28.7 bits (61), Expect = 8.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 127 KSGKRLKRTTHVSFVPDEEIGSTYGMKAFSESQEFKNLNVGFGMDESAP 175
++ K +KR HV+ E IG G K FS+ +LN G+ E AP
Sbjct: 536 QANKAIKRERHVTPTIKEMIGDLNGAKVFSK----LDLNQGYNQLELAP 580
>SB_21016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 28.7 bits (61), Expect = 8.7
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 39 ARLMNLPVMVYEIVPKKPVVVVTLQGLQPDLPSILLNSHMDVVPVNEEL 87
AR+ N V VY +P V++T + DLP+ +LN+ + V V +L
Sbjct: 238 ARVFNTEVFVYHDLPA--CVLITEVSVYHDLPARVLNTKVSVYHVTYQL 284
>SB_20252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 28.7 bits (61), Expect = 8.7
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 39 ARLMNLPVMVYEIVPKKPVVVVTLQGLQPDLPSILLNSHMDVVPVNEEL 87
AR+ N V VY +P V++T + DLP+ +LN+ + V V +L
Sbjct: 238 ARVFNTEVFVYHDLPA--CVLITEVSVYHDLPARVLNTKVSVYHVTYQL 284
>SB_17781| Best HMM Match : RVT_1 (HMM E-Value=1.3e-24)
Length = 460
Score = 28.7 bits (61), Expect = 8.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 127 KSGKRLKRTTHVSFVPDEEIGSTYGMKAFSESQEFKNLNVGFGMDESAP 175
++ K +KR HV+ E IG G K FS+ +LN G+ E AP
Sbjct: 113 QANKAIKRECHVTPTIKEMIGDLNGAKVFSK----LDLNQGYNQLELAP 157
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.137 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,548,317
Number of Sequences: 59808
Number of extensions: 575476
Number of successful extensions: 1240
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1233
Number of HSP's gapped (non-prelim): 19
length of query: 398
length of database: 16,821,457
effective HSP length: 84
effective length of query: 314
effective length of database: 11,797,585
effective search space: 3704441690
effective search space used: 3704441690
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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