GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000470-TA|BGIBMGA000470-PA|IPR002933|Peptidase M20,
IPR011650|Peptidase dimerisation, IPR010159|N-acyl-L-amino-acid
amidohydrolase, IPR001261|ArgE/dapE/ACY1/CPG2/yscS
         (398 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         27   0.91 
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            25   3.7  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 27.1 bits (57), Expect = 0.91
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 94  EAKLTDDGFIYARGSQDMKSTGMIYLEAISRFNK 127
           E KL D GF+ ARGS++ +   ++Y  +  +  K
Sbjct: 261 EVKLDDVGFVSARGSEEYQPFLVVYANSQQQMMK 294


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 12/57 (21%), Positives = 30/57 (52%), Gaps = 1/57 (1%)

Query: 18  KIPSVQPDV-DYSACVEFLTAQARLMNLPVMVYEIVPKKPVVVVTLQGLQPDLPSIL 73
           K+  + PD+ ++   + +L  +  +  LP  +++ +PK  V+ ++   L+   P +L
Sbjct: 170 KLSDIGPDLFEHLPNLTWLDMRDNIFRLPATIFDALPKLRVLELSFNSLEELDPRLL 226


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.137    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,884
Number of Sequences: 2123
Number of extensions: 18115
Number of successful extensions: 19
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 2
length of query: 398
length of database: 516,269
effective HSP length: 65
effective length of query: 333
effective length of database: 378,274
effective search space: 125965242
effective search space used: 125965242
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)