GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000470-TA|BGIBMGA000470-PA|IPR002933|Peptidase M20,
IPR011650|Peptidase dimerisation, IPR010159|N-acyl-L-amino-acid
amidohydrolase, IPR001261|ArgE/dapE/ACY1/CPG2/yscS
         (398 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   6.0  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   6.0  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 207 LLDIDNAGEKFYTILSKF 224
           LLD D  G+K + I+ KF
Sbjct: 64  LLDTDQWGDKTFVIIMKF 81


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 3/25 (12%)

Query: 136 THVSFVPDEEIGSTYGMKAFSESQE 160
           ++VS + +E   S YG+KAF E +E
Sbjct: 281 SYVSIIYEE---SNYGIKAFEELEE 302


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.137    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,184
Number of Sequences: 429
Number of extensions: 5567
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 398
length of database: 140,377
effective HSP length: 59
effective length of query: 339
effective length of database: 115,066
effective search space: 39007374
effective search space used: 39007374
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)