Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000468-TA|BGIBMGA000468-PA|IPR000731|Sterol-sensing 5TM
box
(1118 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50308-6|AAG24025.2| 936|Caenorhabditis elegans Dispatched fami... 179 9e-45
AJ277649-1|CAB90211.1| 917|Caenorhabditis elegans CHE-14 protei... 120 4e-27
AF067618-5|AAC19198.2| 917|Caenorhabditis elegans Abnormal chem... 120 4e-27
AL034393-26|CAI59121.1| 936|Caenorhabditis elegans Hypothetical... 46 2e-04
AL034393-25|CAI59120.1| 797|Caenorhabditis elegans Hypothetical... 46 2e-04
AL034393-24|CAA22312.3| 833|Caenorhabditis elegans Hypothetical... 46 2e-04
AF016429-4|AAB65363.1| 881|Caenorhabditis elegans Patched relat... 44 6e-04
AL132949-24|CAB61102.1| 860|Caenorhabditis elegans Hypothetical... 40 0.008
Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical pr... 40 0.013
Z47074-1|CAA87375.2| 851|Caenorhabditis elegans Hypothetical pr... 39 0.023
Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical pr... 38 0.040
U23176-2|AAC46717.2| 667|Caenorhabditis elegans Patched family ... 38 0.053
U53340-7|AAA96211.2| 1383|Caenorhabditis elegans Npc1 (human nie... 37 0.070
U53149-4|AAA96120.1| 956|Caenorhabditis elegans Patched related... 37 0.070
AL032639-4|CAA21636.2| 858|Caenorhabditis elegans Hypothetical ... 37 0.070
Z69884-4|CAA93751.2| 913|Caenorhabditis elegans Hypothetical pr... 37 0.093
AF043697-2|AAB97556.1| 820|Caenorhabditis elegans Patched relat... 37 0.093
AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical ... 36 0.12
AC024746-6|AAT92059.1| 1361|Caenorhabditis elegans Patched famil... 36 0.16
AC024746-5|AAT92058.1| 1358|Caenorhabditis elegans Patched famil... 36 0.16
AF016653-2|AAC48225.2| 914|Caenorhabditis elegans Patched relat... 34 0.65
U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related... 33 0.86
Z81088-9|CAB03126.1| 335|Caenorhabditis elegans Hypothetical pr... 33 1.1
U80447-8|AAB37812.3| 900|Caenorhabditis elegans Patched related... 33 1.5
U28733-1|AAA68302.2| 982|Caenorhabditis elegans Patched related... 33 1.5
AL132853-3|CAB60438.1| 859|Caenorhabditis elegans Hypothetical ... 33 1.5
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 32 2.6
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 32 2.6
U80024-9|AAK18886.1| 300|Caenorhabditis elegans Serpentine rece... 31 4.6
U00049-4|AAC47055.1| 332|Caenorhabditis elegans Serpentine rece... 31 4.6
AC024869-2|AAK68603.2| 542|Caenorhabditis elegans Hypothetical ... 31 4.6
Z77661-5|CAB01182.1| 343|Caenorhabditis elegans Hypothetical pr... 31 6.1
U88182-2|AAB42308.4| 961|Caenorhabditis elegans Patched related... 31 6.1
U64845-5|AAC48027.1| 581|Caenorhabditis elegans Hypothetical pr... 31 6.1
U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical pr... 31 6.1
AF016415-5|AAW88414.1| 305|Caenorhabditis elegans Serpentine re... 30 8.0
AC025721-7|AAK29911.3| 668|Caenorhabditis elegans Half transpor... 30 8.0
>U50308-6|AAG24025.2| 936|Caenorhabditis elegans Dispatched family
protein 2 protein.
Length = 936
Score = 179 bits (436), Expect = 9e-45
Identities = 164/663 (24%), Positives = 302/663 (45%), Gaps = 53/663 (7%)
Query: 376 IDFGLKNALFDIWIIEDTWLIALGGIFVFACVWIYTRSLILTLFLFAAITFSLGIAYFFY 435
I +KN +F I D+ A + VF+C IY+RS+I T + +T S G+A+F Y
Sbjct: 307 IALNMKNKVFQERIQTDSLFAAFSALLVFSCFLIYSRSIIFTCIILMVVTLSSGVAFFIY 366
Query: 436 VYVFNLHFFPFMNLLVIVIVLGIGADDAFIYVKIWKMIGKQLIKDNVVYQENGVLDINIS 495
V + FFPF+NLLV+VI++ IGADDAF+ + ++ +++ + + + + G + I +
Sbjct: 367 TVVLGIDFFPFINLLVVVILISIGADDAFLLLVYYR---REVERMSHLEYKVGSIYIPLY 423
Query: 496 SAGETILVQILEETMRHSIVTIFITTLTTAVAFYASYVSYIPAINCFSVFAGTAVLVNFV 555
+ +L + L ++ HS+V++F+T+LTTA F + S + + CF V+A V VN++
Sbjct: 424 RESD-LLSRSLRLSLHHSLVSMFVTSLTTASTFLTNLSSPVIVLRCFGVYAALTVTVNYI 482
Query: 556 LMMTWLPISVFIVDVKLYAKKKTFLDLVHKNVNEMWENIRIVLNRFTIICVTKFHIAFVV 615
L++ LP ++ + + KK + D + + E + T I ++
Sbjct: 483 LVVLILPGAIIL--SRPIRKKLSRGDEEPEKI-ESHSYFASKITETTHYFRFGIFICSLI 539
Query: 616 VMGALGFISLVVVFYSPGLHLPDSKQFQLFQTSHPFEQYEMQ-YRDKFLFERLSKDLGTG 674
+ G +SL ++F +PGL P + +L S+ E ++ + F ++R
Sbjct: 540 MTG----LSLFIIFQNPGLKTPQTNPTKLLVDSNIHEYFDNNVHHFNFQWQR-------S 588
Query: 675 TKMPLRWVWGVKAIDNGNHMDPASKGHLVFDENFSISDPKSQSWLLGFCARIKGQPFYQQ 734
++ +V+GV AI + + P +K +NFS + + L F RI
Sbjct: 589 ARLVKNFVFGVDAIKETSTLSPYNKP----SKNFSQAHYSLDTDKLDFYRRIVN------ 638
Query: 735 TLGPLLPNCFIESFK-MYMSRRCIDNIDKINRSPCCETSKFPYKKEVFDFCIIKA----M 789
+ES K ++ + DKI ++ S F K + CI+ A
Sbjct: 639 ----------LESKKYQLVNYTHVSWADKILQA---NESCFSENKTIIHECILSASVRNK 685
Query: 790 ESLYQTPRELFMPGVAGPKFLRSAKPPIIAALVVEFESIVPYSLSYSEMNKFFTEVEKWT 849
++Q P + + GP + K + + S + + FF E+E+ +
Sbjct: 686 NLIHQFPDDFSVIPGDGPFIDQDLK---VVGYFISIPSNQKLQVDTEMIGSFFQEIEE-S 741
Query: 850 QTELENAPA-GMKCGWFLSDFQFYDLQRTLASGTIVALLLSAALGFIVLIPATLNFVTSV 908
+++NA + + C +FYD+ L S + ++ +S + IV+I T S+
Sbjct: 742 CKQIKNATSDSVLCLSSTEITRFYDIVSQLRSSSFTSVAISLGICLIVIIACTRVIKLSI 801
Query: 909 CALTAMIFSSTVTIAVLVINNWKLNILESVAISTSAGLAVDFSLHYALSYTNAS-GNKSA 967
+ + F T+A L++ W+L+++ES + + GL+ D++LHY ++ + S
Sbjct: 802 ISSVIIFFVILWTVASLILLGWQLSVVESTILIITIGLSFDYTLHYVVAIRDTKCVPASE 861
Query: 968 RVKYXXXXXXXXXXXXXXXXGFAGVFLLRSNLLPYSQIGAFLVLIMTVSWTYATFFLCSL 1027
++ AG LL S + QIG LV++ S A+ L S
Sbjct: 862 KLTSAHSTAGIACVFGSLTLFLAGCPLLFSQTASFYQIGTMLVILGITSLFGASIVLPSF 921
Query: 1028 LHI 1030
L +
Sbjct: 922 LMV 924
>AJ277649-1|CAB90211.1| 917|Caenorhabditis elegans CHE-14 protein
protein.
Length = 917
Score = 120 bits (290), Expect = 4e-27
Identities = 186/864 (21%), Positives = 337/864 (39%), Gaps = 123/864 (14%)
Query: 194 PISDYAHLVITNTDN-SSLLSYKNVERLCKFQSXXXXXXXXXXXXXCQRTTHSEDICCPV 252
P+ D+ I N ++ + K +++LC+ QS R +
Sbjct: 126 PLMDHLSQFILEVPNYDAIFNLKFLDKLCQMQSNISKPLSRFDAFTPYRN---------I 176
Query: 253 WSLPNYIALISG--KDSCVNLNKEDVKKAVTILKKCAGYFHNFTLMAACDLDHCN----- 305
WS+ N A IS + +C L++ D+K + C Y T + C + C
Sbjct: 177 WSVANMFACISPNLRVNCTELDESDIKIVRKTIDNCWKYR---TQIFECRDEKCQGQCAT 233
Query: 306 ---VPKYCTQHNAVYNLLFYLIDSEAFSPLNNAQKFVKNTMLFLPLPRSDTVLPYY-KKL 361
+P+ C+ +Y+L + L+ + + F+ NT FLP+ T+ Y + +
Sbjct: 234 CRELPENCSSQ-IMYDLFYRLLPKQ-----RDDTPFLVNT--FLPV---FTLTGYITQNI 282
Query: 362 ENSNMSYDNLVIPAID------FGLKNALFDIW-------IIEDTWLIALGGIFVFACVW 408
+ + YD+L ID F LK L D+ + D+ L L V V
Sbjct: 283 PVNVIIYDDLETSIIDYSKKNKFHLKGLLMDVKRDRLLAAALRDSMLALLAAGLVMIVVA 342
Query: 409 IYTRSLILTLFLFAAITFSLGIAYFFYVYVFNLHFFPFMNLLVIVIVLGIGADDAFIYVK 468
++++SL+ + + +L + VY FP +NL+ V+++ IG+DDAF
Sbjct: 343 VHSQSLLYAFVVI--LLLALSVVGALGVYSLFTDEFPLLNLVTFVLLIAIGSDDAF---- 396
Query: 469 IWKMIGKQLIKDNVVYQENGVLDINISSAGETILVQILEETMRHSIVTIFITTLTTAVAF 528
L+K N N T L H+ T+F+T +T V F
Sbjct: 397 --------LLKSNFPKHLN-------EDTFHTFL--------SHTSFTMFLTCFSTIVPF 433
Query: 529 YASYVSYIPAINCFSVFAGTAVLVNFVLMMTWLPISVFIVDVKLYAKKKTFLDLVHKNVN 588
+ + S + CF +FAG V+ N+ +++++LP + I Y F +
Sbjct: 434 FINITSNVIVFRCFGLFAGVTVIFNYFMVVSFLPAFLLIQ----YRHFDCFTGFKFPYRS 489
Query: 589 EMWENIRIVLNRFTIICVTKFHIAFVVVMGALGFISLVVVFYSPGLHLPDSKQFQLFQTS 648
+ + ++L ++ ++ + ++ + A+G ++ GLHLP+ QLF +
Sbjct: 490 VLSHLLYVLLPH--VLVQGRYVLISLLSIVAIGGAAITY----QGLHLPEYNPLQLFTSD 543
Query: 649 HPFEQYEMQYRDKFLFERLSKDLGTGTKMPLRWVWGVKAIDNGNHMDPASKGHLVFDENF 708
+ E Y+ F F L + R VWGV+ I + + + L D F
Sbjct: 544 NLHEWYDNNAERNFEFVSAKIAL----PLTSRLVWGVEPIYSLSTFRANATSPLRSDPIF 599
Query: 709 SISDPKSQSWLLGFCARIKGQPFYQQTLGPLLPNCFIESFKMYMSRRCIDNIDKINRSPC 768
S+ L F + PF P F++ Y R C
Sbjct: 600 SLKTAGDVRKLARFLGTARQLPFVNHQ-PKFWPERFLDWSDKYPCARGF---------LC 649
Query: 769 CETSKFPYKKEVFDFCIIKAMESLYQTPRELFMPGVAGPKFLRSAKPPIIAALVVEFESI 828
C + + DFC+ + L + + P F V + ++
Sbjct: 650 CNMTNPLFSDSYLDFCLRNSTSFLATSYNDT-------PIFDNKT------FAFVGYTAM 696
Query: 829 VPYSLSYSEMNKFFTE-VEKWTQTELENAPAGMKCGWFLSDFQFYDLQRTLASGTIVALL 887
+P SL Y+ K ++ E T+ +N + W +S + +DL ++ + +++
Sbjct: 697 LPTSLKYNHRFKQLSKSFEMLEMTKPDNGWWAPEW-WLMSTW--FDLLSSIVQDCLSSVV 753
Query: 888 LSAA-LGFIVLIPATLNFVTSVCALTAMIFSSTVTIAVLVINNWKLNILESVAISTSAGL 946
S + I +V + +IF+S+ + +L W L +LE+V + GL
Sbjct: 754 GSLVFVAIFAFIQLKFQAFAAVVTIACVIFTSSAIVTLL---GWVLGVLEAVILVLVVGL 810
Query: 947 AVDFSLHYALSYTNASGNKSARVKYXXXXXXXXXXXXXXXXGFAGVFLLRSNLLPYSQIG 1006
+ D++LHY + G R++ AG +L + + Q+G
Sbjct: 811 SFDYTLHYGAALPE-HGCAEHRIREATSKGVGPVTLAAFTSFLAGASMLPALTHAFYQVG 869
Query: 1007 AFLVLIMTVSWTYATFFLCSLLHI 1030
FLV+I SWT++TFF +L +
Sbjct: 870 VFLVVISITSWTFSTFFYLPMLSL 893
Score = 37.1 bits (82), Expect = 0.070
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 5 YSRFIVRHSYLVLFTVSILSIVLTVIPLILHELPSFSDPIVGFETRGTTLAHRFIAWENL 64
YSR + RH L L +++ V+ + + + +GF+T+ T L+ +AW +
Sbjct: 9 YSRSLYRHPTLFLILPVLITTVIPFGLIWFFPIKLSQNAEIGFDTKDTDLSGPRLAWSRI 68
Query: 65 NDETRPSKRLAV-NPKEIEDQIR 86
S R+A NP+ I+ ++
Sbjct: 69 QPSLMFSNRIAFSNPRPIDTDVQ 91
>AF067618-5|AAC19198.2| 917|Caenorhabditis elegans Abnormal
chemotaxis protein 14 protein.
Length = 917
Score = 120 bits (290), Expect = 4e-27
Identities = 186/864 (21%), Positives = 337/864 (39%), Gaps = 123/864 (14%)
Query: 194 PISDYAHLVITNTDN-SSLLSYKNVERLCKFQSXXXXXXXXXXXXXCQRTTHSEDICCPV 252
P+ D+ I N ++ + K +++LC+ QS R +
Sbjct: 126 PLMDHLSQFILEVPNYDAIFNLKFLDKLCQMQSNISKPLSRFDAFTPYRN---------I 176
Query: 253 WSLPNYIALISG--KDSCVNLNKEDVKKAVTILKKCAGYFHNFTLMAACDLDHCN----- 305
WS+ N A IS + +C L++ D+K + C Y T + C + C
Sbjct: 177 WSVANMFACISPNLRVNCTELDESDIKIVRKTIDNCWKYR---TQIFECRDEKCQGQCAT 233
Query: 306 ---VPKYCTQHNAVYNLLFYLIDSEAFSPLNNAQKFVKNTMLFLPLPRSDTVLPYY-KKL 361
+P+ C+ +Y+L + L+ + + F+ NT FLP+ T+ Y + +
Sbjct: 234 CRELPENCSSQ-IMYDLFYRLLPKQ-----RDDTPFLVNT--FLPV---FTLTGYITQNI 282
Query: 362 ENSNMSYDNLVIPAID------FGLKNALFDIW-------IIEDTWLIALGGIFVFACVW 408
+ + YD+L ID F LK L D+ + D+ L L V V
Sbjct: 283 PVNVIIYDDLETSIIDYSKKNKFHLKGLLMDVKRDRLLAAALRDSMLALLAAGLVMIVVA 342
Query: 409 IYTRSLILTLFLFAAITFSLGIAYFFYVYVFNLHFFPFMNLLVIVIVLGIGADDAFIYVK 468
++++SL+ + + +L + VY FP +NL+ V+++ IG+DDAF
Sbjct: 343 VHSQSLLYAFVVI--LLLALSVVGALGVYSLFTDEFPLLNLVTFVLLIAIGSDDAF---- 396
Query: 469 IWKMIGKQLIKDNVVYQENGVLDINISSAGETILVQILEETMRHSIVTIFITTLTTAVAF 528
L+K N N T L H+ T+F+T +T V F
Sbjct: 397 --------LLKSNFPKHLN-------EDTFHTFL--------SHTSFTMFLTCFSTIVPF 433
Query: 529 YASYVSYIPAINCFSVFAGTAVLVNFVLMMTWLPISVFIVDVKLYAKKKTFLDLVHKNVN 588
+ + S + CF +FAG V+ N+ +++++LP + I Y F +
Sbjct: 434 FINITSNVIVFRCFGLFAGVTVIFNYFMVVSFLPAFLLIQ----YRHFDCFTGFKFPYRS 489
Query: 589 EMWENIRIVLNRFTIICVTKFHIAFVVVMGALGFISLVVVFYSPGLHLPDSKQFQLFQTS 648
+ + ++L ++ ++ + ++ + A+G ++ GLHLP+ QLF +
Sbjct: 490 VLSHLLYVLLPH--VLVQGRYVLISLLSIVAIGGAAITY----QGLHLPEYNPLQLFTSD 543
Query: 649 HPFEQYEMQYRDKFLFERLSKDLGTGTKMPLRWVWGVKAIDNGNHMDPASKGHLVFDENF 708
+ E Y+ F F L + R VWGV+ I + + + L D F
Sbjct: 544 NLHEWYDNNAERNFEFVSAKIAL----PLTSRLVWGVEPIYSLSTFRANATSPLRSDPIF 599
Query: 709 SISDPKSQSWLLGFCARIKGQPFYQQTLGPLLPNCFIESFKMYMSRRCIDNIDKINRSPC 768
S+ L F + PF P F++ Y R C
Sbjct: 600 SLKTAGDVRKLARFLGTARQLPFVNHQ-PKFWPERFLDWSDKYPCARGF---------LC 649
Query: 769 CETSKFPYKKEVFDFCIIKAMESLYQTPRELFMPGVAGPKFLRSAKPPIIAALVVEFESI 828
C + + DFC+ + L + + P F V + ++
Sbjct: 650 CNMTNPLFSDSYLDFCLRNSTSFLATSYNDT-------PIFDNKT------FAFVGYTAM 696
Query: 829 VPYSLSYSEMNKFFTE-VEKWTQTELENAPAGMKCGWFLSDFQFYDLQRTLASGTIVALL 887
+P SL Y+ K ++ E T+ +N + W +S + +DL ++ + +++
Sbjct: 697 LPTSLKYNHRFKQLSKSFEMLEMTKPDNGWWAPEW-WLMSTW--FDLLSSIVQDCLSSVV 753
Query: 888 LSAA-LGFIVLIPATLNFVTSVCALTAMIFSSTVTIAVLVINNWKLNILESVAISTSAGL 946
S + I +V + +IF+S+ + +L W L +LE+V + GL
Sbjct: 754 GSLVFVAIFAFIQLKFQAFAAVVTIACVIFTSSAIVTLL---GWVLGVLEAVILVLVVGL 810
Query: 947 AVDFSLHYALSYTNASGNKSARVKYXXXXXXXXXXXXXXXXGFAGVFLLRSNLLPYSQIG 1006
+ D++LHY + G R++ AG +L + + Q+G
Sbjct: 811 SFDYTLHYGAALPE-HGCAEHRIREATSKGVGPVTLAAFTSFLAGASMLPALTHAFYQVG 869
Query: 1007 AFLVLIMTVSWTYATFFLCSLLHI 1030
FLV+I SWT++TFF +L +
Sbjct: 870 VFLVVISITSWTFSTFFYLPMLSL 893
Score = 37.1 bits (82), Expect = 0.070
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 5 YSRFIVRHSYLVLFTVSILSIVLTVIPLILHELPSFSDPIVGFETRGTTLAHRFIAWENL 64
YSR + RH L L +++ V+ + + + +GF+T+ T L+ +AW +
Sbjct: 9 YSRSLYRHPTLFLILPVLITTVIPFGLIWFFPIKLSQNAEIGFDTKDTDLSGPRLAWSRI 68
Query: 65 NDETRPSKRLAV-NPKEIEDQIR 86
S R+A NP+ I+ ++
Sbjct: 69 QPSLMFSNRIAFSNPRPIDTDVQ 91
>AL034393-26|CAI59121.1| 936|Caenorhabditis elegans Hypothetical
protein Y18D10A.7c protein.
Length = 936
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 506 LEETMRHSIVTIFITTLTTAVAFYASYVSYIPAINCFSVFAGTAVLVNFVLMMT 559
+E+ MRH+ V+I IT+LT A+AF ++ +PA+ F ++ A+L F+ ++T
Sbjct: 399 IEKAMRHAAVSISITSLTDALAFLIGSIAPLPAVIYFCYYSSAAILFIFLYVLT 452
>AL034393-25|CAI59120.1| 797|Caenorhabditis elegans Hypothetical
protein Y18D10A.7b protein.
Length = 797
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 506 LEETMRHSIVTIFITTLTTAVAFYASYVSYIPAINCFSVFAGTAVLVNFVLMMT 559
+E+ MRH+ V+I IT+LT A+AF ++ +PA+ F ++ A+L F+ ++T
Sbjct: 383 IEKAMRHAAVSISITSLTDALAFLIGSIAPLPAVIYFCYYSSAAILFIFLYVLT 436
>AL034393-24|CAA22312.3| 833|Caenorhabditis elegans Hypothetical
protein Y18D10A.7a protein.
Length = 833
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 506 LEETMRHSIVTIFITTLTTAVAFYASYVSYIPAINCFSVFAGTAVLVNFVLMMT 559
+E+ MRH+ V+I IT+LT A+AF ++ +PA+ F ++ A+L F+ ++T
Sbjct: 399 IEKAMRHAAVSISITSLTDALAFLIGSIAPLPAVIYFCYYSSAAILFIFLYVLT 452
>AF016429-4|AAB65363.1| 881|Caenorhabditis elegans Patched related
family protein 16 protein.
Length = 881
Score = 44.0 bits (99), Expect = 6e-04
Identities = 40/182 (21%), Positives = 87/182 (47%), Gaps = 36/182 (19%)
Query: 401 IFVFACV----WIYTRSLILTLFLFAAITFSLGIAYFFYVYVFNLHFFPFMNLLVIV--I 454
IF+FA ++++ ++++ + A + G A+ F +++F FPF ++ +++ +
Sbjct: 196 IFIFATNSREHFVFSHNVVMAILGIAGPLMATGTAFGF-LFLFG---FPFNSITLVMPFL 251
Query: 455 VLGIGADDAFIYVKIWKMIGK-QLIKDNVVYQENGVLDINISSAGETILVQILEETMRHS 513
++G+G DD FI + + K + ++D + ETM +
Sbjct: 252 IIGVGCDDVFIIIHAMRKTDKSESLEDRIA------------------------ETMEEA 287
Query: 514 IVTIFITTLTTAVAFYASYVSYIPAINCFSVFAGTAVLVNFVLMMTWLPISVFIVDVKLY 573
+I +T+ T ++F + PAI+ F ++ AV V+FV +T+ ++V + + K
Sbjct: 288 GPSITVTSATNCLSFAIGIATPTPAISLFCLYTCVAVAVDFVYQLTFF-VAVLVYEEKRL 346
Query: 574 AK 575
K
Sbjct: 347 MK 348
>AL132949-24|CAB61102.1| 860|Caenorhabditis elegans Hypothetical
protein Y53F4B.28 protein.
Length = 860
Score = 40.3 bits (90), Expect = 0.008
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 25/126 (19%)
Query: 444 FPFMNLLVIV--IVLGIGADDAFIYVKIWKMIGKQLIKDNVVYQENGVLDINISSAGETI 501
+PF N+L +V +V+ IG DDAF+ + W+ S+ GE++
Sbjct: 302 YPFSNILTVVPFLVVTIGIDDAFLILAGWRQ----------------------STKGESL 339
Query: 502 LVQILEETMRHSIVTIFITTLTTAVAFYASYVSYIPAINCFSVFAGTAVLVNFVLMMTWL 561
V+ L +++ S ++ +T++T F S +P + F ++ A+ ++F+ MT+
Sbjct: 340 EVR-LGQSVAISGASVTVTSVTDVACFATGLFSNMPVVQLFCLYTTVALAIDFIYQMTFF 398
Query: 562 PISVFI 567
V I
Sbjct: 399 TALVGI 404
>Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical protein
ZK675.1 protein.
Length = 1405
Score = 39.5 bits (88), Expect = 0.013
Identities = 33/178 (18%), Positives = 73/178 (41%), Gaps = 7/178 (3%)
Query: 791 SLYQTPRELFMPGVAGPKFLRSAKPPIIAALVVEFESIVPYSLSYSEMNKFFTEVEKWTQ 850
S + TP + + F+ +A+P + + + ++ + + E++T
Sbjct: 1096 SFFPTPPKWELSKNHTENFIPAAEPLAYSQIPFYLTGLTDTAVIVDAIKDIRSVCERFTD 1155
Query: 851 TELENAPAGMKCGWFLSDFQFYDLQRTLASGTIVALLLSAALGFIVLIPATLNFVTSVCA 910
L N P G+ F F++ L + A+ + F V+ N ++
Sbjct: 1156 QGLPNFPQGIA-------FTFWEQYLFLTGNLMQAISIITISVFCVISVLLFNPWAALMV 1208
Query: 911 LTAMIFSSTVTIAVLVINNWKLNILESVAISTSAGLAVDFSLHYALSYTNASGNKSAR 968
+ + + + + KLN + +V + T+ G+ V+F++H +S+ A G +S R
Sbjct: 1209 VCILGIMTCELAGFMGLVGIKLNPVSAVTLITAVGIGVEFTVHVVVSFLTALGTRSQR 1266
Score = 33.1 bits (72), Expect = 1.1
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 510 MRHSIVTIFITTLTTAVAFYASYVSYIPAINCFSVFAGTAVLVNFVLMMTWLPISVFIVD 569
MR + ++I T++ ++F + IPA+ F + + NF+ ++T P I+
Sbjct: 756 MRETGMSILCTSINNILSFLTGTLLPIPALRSFCAQSSILLTFNFIAILTIYPA---IIS 812
Query: 570 VKLYAKKKTFLDLV 583
+ L KK DLV
Sbjct: 813 IDLRRKKAQRRDLV 826
>Z47074-1|CAA87375.2| 851|Caenorhabditis elegans Hypothetical
protein K07C10.1 protein.
Length = 851
Score = 38.7 bits (86), Expect = 0.023
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 26/135 (19%)
Query: 445 PFMNLLVIV--IVLGIGADDAFIYVKIWKMIGKQLIKDNVVYQENGVLDINISSAGETIL 502
PF +++ I ++LGIG DDAF+ + W+ ++ KD Q E L
Sbjct: 318 PFNSIMCITPFLILGIGVDDAFLLLNCWR---REEGKDKSAKQ------------AENQL 362
Query: 503 VQILEETMRHSIVTIFITTLTTAVAFYASYVSYIPAINCFSVFAGTAVLVNFVLMMTWLP 562
+++ E ++ IT+LT +AF +++ P ++ F + A++++F+ L
Sbjct: 363 ARVIREIS----PSMAITSLTNTMAFGVGFLAPTPQMSSFCLGTALAIVLDFL-----LE 413
Query: 563 ISVFIVDVKLYAKKK 577
+F+ + L+ KKK
Sbjct: 414 FLIFVPCMVLFYKKK 428
>Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical
protein F54G8.5 protein.
Length = 844
Score = 37.9 bits (84), Expect = 0.040
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 444 FPFMNLLVIV--IVLGIGADDAFIYVKIWKMIGKQLIKDNVVYQENGVLDINISSAGETI 501
+PF+ L+ I+ +V+ IG D+ F+ +K W+M K SS E
Sbjct: 319 YPFLPLVFIMPFLVVSIGTDNMFLMLKSWRMTKK-------------------SSNEEQR 359
Query: 502 LVQILEETMRHSIVTIFITTLTTAVAFYASYVSYIPAINCFSVFAGTAVLVNFVLMMTW 560
+ L E S ++F+T+LT ++F +S A+ F + A+L F+ +T+
Sbjct: 360 YIHALTE----SAASLFLTSLTDGLSFAIGSISDFHAVRVFCTYCAMAILFMFLFQVTF 414
>U23176-2|AAC46717.2| 667|Caenorhabditis elegans Patched family
protein 2 protein.
Length = 667
Score = 37.5 bits (83), Expect = 0.053
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Query: 846 EKWTQTELENAPAGMKCGWFLSDFQFYDLQRTLASGTIVALLLSAALGFIVLIPATLNFV 905
E++T L N P G+ F F++ L + A+ + F V+ N
Sbjct: 522 ERFTDQGLPNFPQGIA-------FTFWEQYLFLTGNLMQAISIITISVFCVISVLLFNPW 574
Query: 906 TSVCALTAMIFSSTVTIAVLVINNWKLNILESVAISTSAGLAVDFSLHYALSYTNASGNK 965
++ + + + + + KLN + +V + T+ G+ V+F++H +S+ A G +
Sbjct: 575 AALMVVCILGIMTCELAGFMGLVGIKLNPVSAVTLITAVGIGVEFTVHVVVSFLTALGTR 634
Query: 966 SAR 968
S R
Sbjct: 635 SQR 637
Score = 31.1 bits (67), Expect = 4.6
Identities = 16/80 (20%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 510 MRHSIVTIFITTLTTAVAFYASYVSYIPAINCFSVFAGTAVLVNFVLMMTWLPISVFIVD 569
MR + ++I T++ ++F + IPA+ F + + NF+ ++T P ++ +D
Sbjct: 212 MRETGMSILCTSINNILSFLTGTLLPIPALRSFCAQSSILLTFNFIAILTIYP-AIISID 270
Query: 570 VKLYAKKKTFLDLVHKNVNE 589
++ ++ D ++ +E
Sbjct: 271 LRRKKAQRRDFDTREESTSE 290
>U53340-7|AAA96211.2| 1383|Caenorhabditis elegans Npc1 (human
niemann pick c disease)related protein 1 protein.
Length = 1383
Score = 37.1 bits (82), Expect = 0.070
Identities = 20/68 (29%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 504 QILEETMRHSIVTIFITTLTTAVAFYASYVSYIPAINCFSVFAGTAVLVNFVLMMTWLPI 563
+I+ M ++ +F ++L A +F+ + +PAI F ++AG AVL++ VL T + +
Sbjct: 737 EIVGMVMAGTMPAMFSSSLGCAFSFFIGGFTDLPAIRTFCLYAGLAVLIDVVLHCT-IFL 795
Query: 564 SVFIVDVK 571
++F+ D +
Sbjct: 796 ALFVWDTQ 803
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/91 (20%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 869 FQFYDLQRTLASGTIVALLLSAALGF-IVLIPATLNFVTSVCALTAMIFSSTVTIAVLVI 927
F FY+ T+ L ++ F I+ + ++ + CA+ + + +A + I
Sbjct: 1117 FPFYEQYSTIMPILTTQLFITVVGVFGIICVTLGIDVKGAACAVICQVSNYFHIVAFMYI 1176
Query: 928 NNWKLNILESVAISTSAGLAVDFSLHYALSY 958
N +N L + + S+G+ ++FS++ Y
Sbjct: 1177 FNIPVNALSATNLVMSSGILIEFSVNVLKGY 1207
>U53149-4|AAA96120.1| 956|Caenorhabditis elegans Patched related
family protein 1 protein.
Length = 956
Score = 37.1 bits (82), Expect = 0.070
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 908 VCALTAMIFSSTVTIAVL-VINNWKLNILESVAIST---SAGLAVDFSLHYALSYTNASG 963
+CA+ ++ +++ + VL ++ W +N L+SV+I T G +VD S H A +++ + G
Sbjct: 798 ICAVAIVLSIASINVGVLGFMSFWGVN-LDSVSIITVIMCIGFSVDLSAHIAYAFSQSYG 856
Query: 964 NKSAR 968
N AR
Sbjct: 857 NSHAR 861
>AL032639-4|CAA21636.2| 858|Caenorhabditis elegans Hypothetical
protein Y38F1A.3 protein.
Length = 858
Score = 37.1 bits (82), Expect = 0.070
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 26/151 (17%)
Query: 431 AYFFYVYVFNLHFFPFMNLLVIVIVLGIGADDAFIYVKIW-KMIGKQLIKDNVVYQENGV 489
A F +++ + P + + V ++L IG DD FI++ W + K ++D
Sbjct: 271 ASFGHLFWMGFEYLPIVTV-VPFLILSIGVDDVFIFIHAWHRTPYKHSVRDR-------- 321
Query: 490 LDINISSAGETILVQILEETMRHSIVTIFITTLTTAVAFYASYVSYIPAINCFSVFAGTA 549
+ ET+ + +I IT+LT ++F + PAI F VF TA
Sbjct: 322 ----------------MAETLADAGPSISITSLTNLLSFAIGIFTPTPAIYTFCVFISTA 365
Query: 550 VLVNFVLMMTWLPISVFIVDVKLYAKKKTFL 580
V+ +++ + + + + + +K +L
Sbjct: 366 VIYDYIYQIFFFSAVLVLSGEREEQRKNAYL 396
>Z69884-4|CAA93751.2| 913|Caenorhabditis elegans Hypothetical
protein F31F6.5 protein.
Length = 913
Score = 36.7 bits (81), Expect = 0.093
Identities = 30/153 (19%), Positives = 69/153 (45%), Gaps = 26/153 (16%)
Query: 408 WIYTRSLILTLFLFAAITFSLGIAYFFYVYVFNLHFFPFMNLLVIVIVLGIGADDAFIYV 467
WI ++ + +F+ + S+ I+ F ++++ + + +N ++ +++ IG DD F+
Sbjct: 297 WISSKPWLAAAGMFSTV-LSI-ISAFGFLFILGVRY-NVINTIIPFLIIAIGIDDMFLMN 353
Query: 468 KIWKMIGKQLIKDNVVYQENGVLDINISSAGETILVQILEETMRHSIVTIFITTLTTAVA 527
W K L S E + +T+ H+ V + IT +T ++
Sbjct: 354 ACWDQTSKSL------------------SVPER-----MSKTLSHAGVAVTITNVTDVMS 390
Query: 528 FYASYVSYIPAINCFSVFAGTAVLVNFVLMMTW 560
F ++ +P I F ++A +V ++ +T+
Sbjct: 391 FAIGCITDLPGIQFFCIYACVSVAFSYFYQLTF 423
Score = 31.1 bits (67), Expect = 4.6
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 883 IVALLLSAALGFIVL--IPATLNFVTSVCALTAMIFSSTVTIAVLVINNWKLNILESVAI 940
+++LL A + F+++ +P+ S+ ++ +F V L+ + ++I
Sbjct: 755 VISLLCMAVVSFLLVPSLPSGFVIFVSIVSINIGVFGYMTLWGV------NLDAVSMISI 808
Query: 941 STSAGLAVDFSLHYALSYTNASGNKSARV 969
S G AVD S H ++ + G+ RV
Sbjct: 809 IMSIGFAVDLSAHIIYAFVTSHGDTKQRV 837
>AF043697-2|AAB97556.1| 820|Caenorhabditis elegans Patched related
family protein 11 protein.
Length = 820
Score = 36.7 bits (81), Expect = 0.093
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 25/126 (19%)
Query: 444 FPFMNLLVIV--IVLGIGADDAFIYVKIWKMIGKQLIKDNVVYQENGVLDINISSAGETI 501
FP ++ + +VLGIG DDAFI + WK I D E ++D+ S
Sbjct: 295 FPSFSIQCVTPFLVLGIGVDDAFILLHRWKH--HIAITDTPRRLEQVIVDVGPS------ 346
Query: 502 LVQILEETMRHSIVTIFITTLTTAVAFYASYVSYIPAINCFSVFAGTAVLVNFVLMMTWL 561
I IT+LT +AF +++ P ++ F + A A+L++++ T L
Sbjct: 347 ---------------ITITSLTNIIAFGIGFLTPTPQMSLFCLTASLALLLDYIFTYTIL 391
Query: 562 PISVFI 567
VF+
Sbjct: 392 APIVFL 397
>AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical
protein Y39A1B.2 protein.
Length = 1003
Score = 36.3 bits (80), Expect = 0.12
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 495 SSAGETILVQILEETMRHSIVTIFITTLTTAVAFYASYVSYIPAINCFSVFAGTAVLVNF 554
+S+ ET L ++ET + V+I +T+LT ++F + P++ F +A AV+ +
Sbjct: 379 TSSTET-LEHRMKETFADAAVSITVTSLTDLISFGVGCATPFPSVQMFCAYAVAAVIFTY 437
Query: 555 VLMMTW 560
+ +T+
Sbjct: 438 IYQLTF 443
Score = 32.3 bits (70), Expect = 2.0
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Query: 860 MKCGWFLSDFQFYDLQRTLASGTIVALLLSAALGFIVLIPATLNFVTSVCALTAMIFSST 919
++ G + FQF + + GT+ ++ A G V+ + + V +L +
Sbjct: 686 LQTGVYADFFQFAEQYNAVLPGTLSSI---AYAGVAVVAVSLILIPEPVASLWVSFSIVS 742
Query: 920 VTIAVL-VINNW--KLNILESVAISTSAGLAVDFSLHYALSYT---NASGNKSAR 968
+ I +L + W +L+ + V I S G VDF+ H A ++ N G++ R
Sbjct: 743 INIGILGFMTFWSVRLDFISMVTIVMSIGFCVDFAAHLAYNFAKGQNMDGSERMR 797
>AC024746-6|AAT92059.1| 1361|Caenorhabditis elegans Patched family
protein 3, isoform b protein.
Length = 1361
Score = 35.9 bits (79), Expect = 0.16
Identities = 25/125 (20%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 846 EKWTQTELENAPAGMKCGWFLSDFQFYDLQRTLASGTIVALLLSAALGFIVLIPATLNFV 905
E++++ L N P+G+ F F++ TL A+ + A F V+ N
Sbjct: 1109 EEYSERGLSNHPSGIA-------FTFWEQYLTLRWNLFQAICIIALAVFCVISILMFNPW 1161
Query: 906 TSVCALTAMIFSSTVTIAVLVINNWKLNILESVAISTSAGLAVDFSLHYALSYTNASGNK 965
+ + ++ ++ + + K+N + +V + + G+ V+F+ H L++ A G
Sbjct: 1162 AATLIMCIVVITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTALGTI 1221
Query: 966 SARVK 970
R++
Sbjct: 1222 DQRLE 1226
Score = 31.1 bits (67), Expect = 4.6
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 510 MRHSIVTIFITTLTTAVAFYASYVSYIPAINCFSVFAGTAVLVNFVLMMTWLPISVFIVD 569
++ + +++ +T++ +AF + YV IPA+ F + N + +M P + I D
Sbjct: 722 LKETGMSVMLTSINNILAFISGYVLPIPALRSFCSQTAILLAFNLIFLMFIFPAMIGI-D 780
Query: 570 VKLYAKKK 577
++ K K
Sbjct: 781 LRRQRKGK 788
>AC024746-5|AAT92058.1| 1358|Caenorhabditis elegans Patched family
protein 3, isoform a protein.
Length = 1358
Score = 35.9 bits (79), Expect = 0.16
Identities = 25/125 (20%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 846 EKWTQTELENAPAGMKCGWFLSDFQFYDLQRTLASGTIVALLLSAALGFIVLIPATLNFV 905
E++++ L N P+G+ F F++ TL A+ + A F V+ N
Sbjct: 1106 EEYSERGLSNHPSGIA-------FTFWEQYLTLRWNLFQAICIIALAVFCVISILMFNPW 1158
Query: 906 TSVCALTAMIFSSTVTIAVLVINNWKLNILESVAISTSAGLAVDFSLHYALSYTNASGNK 965
+ + ++ ++ + + K+N + +V + + G+ V+F+ H L++ A G
Sbjct: 1159 AATLIMCIVVITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTALGTI 1218
Query: 966 SARVK 970
R++
Sbjct: 1219 DQRLE 1223
Score = 31.1 bits (67), Expect = 4.6
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 510 MRHSIVTIFITTLTTAVAFYASYVSYIPAINCFSVFAGTAVLVNFVLMMTWLPISVFIVD 569
++ + +++ +T++ +AF + YV IPA+ F + N + +M P + I D
Sbjct: 722 LKETGMSVMLTSINNILAFISGYVLPIPALRSFCSQTAILLAFNLIFLMFIFPAMIGI-D 780
Query: 570 VKLYAKKK 577
++ K K
Sbjct: 781 LRRQRKGK 788
>AF016653-2|AAC48225.2| 914|Caenorhabditis elegans Patched related
family protein 3 protein.
Length = 914
Score = 33.9 bits (74), Expect = 0.65
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 14/119 (11%)
Query: 444 FPFMNLLVIV--IVLGIGADDAFIYVKIWKMIGKQLIKDNVVYQENGVLDINISSAGETI 501
F F ++L + +VL IG DD+++ W+ I K + ++ +N+
Sbjct: 334 FRFGSILCVTPFLVLAIGVDDSYLMANAWQRITCHRRK-HARFES-----VNVE------ 381
Query: 502 LVQILEETMRHSIVTIFITTLTTAVAFYASYVSYIPAINCFSVFAGTAVLVNFVLMMTW 560
L + E + +I ITT+T A+AF + I FS+ AV+ +FV +T+
Sbjct: 382 LKNRITEMFIETGPSITITTITNALAFGIGATTPAAEIQLFSIGNALAVITDFVFTITF 440
>U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related
family protein 2 protein.
Length = 933
Score = 33.5 bits (73), Expect = 0.86
Identities = 24/110 (21%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 865 FLSDFQFYDLQRTLASGTIVALLLSAALGFIVLIPATLNFVTSVCALTAMIFSSTVTIAV 924
F+ + F D + T+ ++++ ++++ A L +C+L + +++ V
Sbjct: 689 FMPIWMFTDQYIIIIPNTVQNIIIAL---LVMIVIAVLFIPQPMCSLWVALACASIDFGV 745
Query: 925 L-VINNWKLNI--LESVAISTSAGLAVDFSLHYALSYTNASGNKSA-RVK 970
+ + W +N+ + + I S G +VD+S H A Y + + +A RVK
Sbjct: 746 IGYMTLWGVNLDAISMITIIMSIGFSVDYSAHIAYGYVVSREDTAAGRVK 795
>Z81088-9|CAB03126.1| 335|Caenorhabditis elegans Hypothetical
protein F53F1.9 protein.
Length = 335
Score = 33.1 bits (72), Expect = 1.1
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 408 WIYTRSLILTLFLFAAITFSLGIAYFFYVYVFNLHFF--PFMNLLVIVIVLGI 458
WI S+++ LFLF +TF L V+ + F PF LL + I++ I
Sbjct: 9 WILDSSILIVLFLFTIVTFILYFIEIQIVFSYRKTTFKGPFYRLLFVGIIVDI 61
>U80447-8|AAB37812.3| 900|Caenorhabditis elegans Patched related
family protein 10 protein.
Length = 900
Score = 32.7 bits (71), Expect = 1.5
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 871 FYDLQRTLASGTIVALLLSAALGFIVLIPATLNFVTSVCALTAMIFSSTVTIAVL-VINN 929
F D + T+ ++++ A +L+ + L VC+ + ++ + VL +
Sbjct: 716 FTDQYALVVPNTMQDIIVAVAC---MLVISALLIPQPVCSFWVAVTIGSIDLGVLGFMTL 772
Query: 930 WKLNI--LESVAISTSAGLAVDFSLHYALSYT-NASGNKSARV 969
W +N+ + + I S G +VD+S H +Y + SARV
Sbjct: 773 WNVNLDAISMITIIMSVGFSVDYSAHITYAYVISKESTTSARV 815
>U28733-1|AAA68302.2| 982|Caenorhabditis elegans Patched related
family protein 6 protein.
Length = 982
Score = 32.7 bits (71), Expect = 1.5
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 872 YDLQRTLASGTIVAL---LLSAALGFIVLIPATLNFVTS-VCALTAMIFSSTVTIAVL-V 926
Y R +A V L + + L + L F+ + +CAL T+ I V+
Sbjct: 775 YQQSRAIADQLNVILSSTITNDTLAMFCMFCVALIFIPNPICALFITFAMVTIDIGVIGF 834
Query: 927 INNW--KLNILESVAISTSAGLAVDFSLHYALSYTNASGNKSA 967
++ W KL+ + + I S G +++FS H + + N SA
Sbjct: 835 LSLWSVKLDPISMITIIMSIGFSIEFSAHITHGFVSNDSNLSA 877
>AL132853-3|CAB60438.1| 859|Caenorhabditis elegans Hypothetical
protein Y80D3A.7 protein.
Length = 859
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/67 (22%), Positives = 34/67 (50%)
Query: 509 TMRHSIVTIFITTLTTAVAFYASYVSYIPAINCFSVFAGTAVLVNFVLMMTWLPISVFIV 568
T++ + ++ +TT+T V+F +S P + F++++ A +V ++ + P + I
Sbjct: 320 TVQEAGCSMTVTTVTNLVSFGNGVLSTTPVLQTFAIYSSVASVVCYIYQLVIFPAIIAIT 379
Query: 569 DVKLYAK 575
Y K
Sbjct: 380 APNEYQK 386
Score = 31.1 bits (67), Expect = 4.6
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 882 TIVALLLSAALGFIVLIPATLNFVTSVCALTAMIFSSTVTIAVLVINNWKLNILESVAIS 941
T+++ ++ L FI+ IP ++ ++V AL ++ F L I ++ + + ++
Sbjct: 658 TVISEVICMGLTFILFIPDLISIFSAVFALFSVNFG---VFGFLSIWGVGMDPVSTASLL 714
Query: 942 TSAGLAVDFSLHYALSY 958
S G +VD S H + Y
Sbjct: 715 MSIGFSVDISAHISYHY 731
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 8/48 (16%)
Query: 356 PYYKKLENSNMSYDNLVIPAIDFGLKNALFDIWI-IEDTWLIALGGIF 402
PYYK+ E S S+D + NA+FD+WI ++ W + L G+F
Sbjct: 1478 PYYKQFEESAQSWDEKLNKI------NAMFDVWIDVQRRW-VYLEGLF 1518
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 8/48 (16%)
Query: 356 PYYKKLENSNMSYDNLVIPAIDFGLKNALFDIWI-IEDTWLIALGGIF 402
PYYK+ E S S+D + NA+FD+WI ++ W + L G+F
Sbjct: 1478 PYYKQFEESAQSWDEKLNKI------NAMFDVWIDVQRRW-VYLEGLF 1518
>U80024-9|AAK18886.1| 300|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 10 protein.
Length = 300
Score = 31.1 bits (67), Expect = 4.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 280 VTILKKCAGYFHNFTLMAACDLDHCNVPKYC 310
+ IL C+G F + L +C L+ N+P+ C
Sbjct: 140 ILILAVCSGIFEDLVLFQSCTLNLSNIPRNC 170
>U00049-4|AAC47055.1| 332|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 3 protein.
Length = 332
Score = 31.1 bits (67), Expect = 4.6
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 465 IYVKIWKMIGKQLIKDNVVYQENGVLDINISSAGETILVQILEETMRHSIVTIFITTLTT 524
I++ + +I LI DN + NG I+ + + +++ T+ I+T+ IT +TT
Sbjct: 149 IFLAPFLVIWNVLISDNFIGYVNGGFGISYTRRVTWASLSLMQFTL--IILTVLITMVTT 206
Query: 525 AVAFY 529
V FY
Sbjct: 207 TVTFY 211
>AC024869-2|AAK68603.2| 542|Caenorhabditis elegans Hypothetical
protein Y75B7AL.1 protein.
Length = 542
Score = 31.1 bits (67), Expect = 4.6
Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 414 LILTLFLFAAITFSLGIAYFFYVYVFNLHFFPFMNLLVIVIVLGIGADDAFIYVKIWKMI 473
L++ LF ++TF L I V + N + N+L++V A + IY+K + +
Sbjct: 297 LVVKFILFRSLTFFLDIMEVTVVMMDNYYIIDISNILILV----NSATNCLIYLKATEWL 352
Query: 474 GKQLIKDNVVYQENGVLD 491
+ ++ + ++ + D
Sbjct: 353 NSRFVERKTIKRKKTICD 370
>Z77661-5|CAB01182.1| 343|Caenorhabditis elegans Hypothetical
protein F40G12.6 protein.
Length = 343
Score = 30.7 bits (66), Expect = 6.1
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 181 PINLNYASGTCGPPISDYAHLVITNTDNSSLLSYKNVERLCK 222
PI +N GTC + ++A +V NT +SS +Y+ +CK
Sbjct: 271 PIQVNSEVGTCASIVDEFAFIVSENTISSS-PAYEYTLEICK 311
>U88182-2|AAB42308.4| 961|Caenorhabditis elegans Patched related
family protein 5 protein.
Length = 961
Score = 30.7 bits (66), Expect = 6.1
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 870 QFYDLQRTLASGTIVALLLSAALGFIVLIPATLNFVTSVCALTAMIFSSTVTIAVLVINN 929
Q L RT A+ T + L+ A+ + IP + +T+ ++ ++ +T + L + +
Sbjct: 743 QMLSLGRT-ATQTGIWTLVCMAVVCAIFIPNPCSIITATVSIASI---TTGVMGFLSLWS 798
Query: 930 WKLNILESVAISTSAGLAVDFSLHYALSY 958
+ L+ + A+ S GL+VDF H A +
Sbjct: 799 FDLDPVVMAAVLMSIGLSVDFIAHVAYHF 827
>U64845-5|AAC48027.1| 581|Caenorhabditis elegans Hypothetical
protein F45F2.6 protein.
Length = 581
Score = 30.7 bits (66), Expect = 6.1
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Query: 353 TVLPYYKKLENSNMSYDNLVIPAIDFGLKNALFDIWIIEDTWLIALGGIFVFACVWIYTR 412
TVL Y N+ A FGLK+ +I L + I + W +
Sbjct: 21 TVLTDYSSTIPENLPAWTKNTKAQSFGLKSLTALYTLI----LTIVAFIIEISPTW-QSE 75
Query: 413 SLILTLFLFAAITFSLGIAYFFYVYVFNLHFFPFMNLLV 451
S+ + +F + +S+ I YF Y+Y + L+ F +L+
Sbjct: 76 SMNIEYTIFCVLMYSIAILYFIYLYAYILYPIVFNTILL 114
>U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical
protein F53H8.3 protein.
Length = 569
Score = 30.7 bits (66), Expect = 6.1
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 408 WIYTRSLILTLFLFAAITFSLGIAYFFYVYVFNLHFFPFMNLLVIV-----IVLGIGADD 462
WI L F A+T S+ +A+ F ++ + + PF L+ I ++G+
Sbjct: 443 WIIASELFTQQFRATAVTVSVFVAWTF-AFIVSTSYLPFQQLVGITFSYFPFIIGLAVFG 501
Query: 463 AFIYV 467
FIYV
Sbjct: 502 IFIYV 506
>AF016415-5|AAW88414.1| 305|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 30 protein.
Length = 305
Score = 30.3 bits (65), Expect = 8.0
Identities = 13/35 (37%), Positives = 14/35 (40%)
Query: 288 GYFHNFTLMAACDLDHCNVPKYCTQHNAVYNLLFY 322
G F N L C D +P CTQ N FY
Sbjct: 145 GLFENVVLYGFCGFDEDLIPATCTQFGCAINKCFY 179
>AC025721-7|AAK29911.3| 668|Caenorhabditis elegans Half transporter
(pgp related)protein 6 protein.
Length = 668
Score = 30.3 bits (65), Expect = 8.0
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 664 FERL--SKDLGTGTKMPLRWVWGVKAIDNGNHMDPASKGHLVFDENFSISDPKSQ 716
F RL S + TG +P +WG ++ + P GH VF EN ++S P Q
Sbjct: 401 FSRLEPSIPMDTGVCIPYHSLWGDIKFEDVSFSYPTRPGHTVF-ENLTLSIPAGQ 454
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.324 0.138 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,385,570
Number of Sequences: 27539
Number of extensions: 1119157
Number of successful extensions: 4077
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 3991
Number of HSP's gapped (non-prelim): 100
length of query: 1118
length of database: 12,573,161
effective HSP length: 89
effective length of query: 1029
effective length of database: 10,122,190
effective search space: 10415733510
effective search space used: 10415733510
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 65 (30.3 bits)
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