Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000466-TA|BGIBMGA000466-PA|IPR002126|Cadherin
(460 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V5N8 Cluster: Protocadherin-like wing polarity protei... 390 e-107
UniRef50_Q7PPU8 Cluster: ENSANGP00000001238; n=2; Culicidae|Rep:... 380 e-104
UniRef50_UPI0000DB794E Cluster: PREDICTED: similar to Protocadhe... 190 7e-47
UniRef50_Q6V1P9 Cluster: Dachsous-2; n=9; Eutheria|Rep: Dachsous... 38 0.56
UniRef50_UPI0000DB71FC Cluster: PREDICTED: similar to Cad87A CG6... 37 1.3
UniRef50_UPI0000F3174E Cluster: dachsous 2 isoform 1; n=9; Theri... 37 1.3
UniRef50_A1HSQ7 Cluster: D-isomer specific 2-hydroxyacid dehydro... 37 1.3
UniRef50_A7SAP5 Cluster: Predicted protein; n=1; Nematostella ve... 37 1.3
UniRef50_Q4SFY3 Cluster: Chromosome 7 SCAF14601, whole genome sh... 36 1.7
UniRef50_A7RKF4 Cluster: Predicted protein; n=2; Nematostella ve... 36 1.7
UniRef50_Q5W7K5 Cluster: Protocadherin-gamma; n=27; Clupeocephal... 36 2.2
UniRef50_Q4T6J0 Cluster: Chromosome undetermined SCAF8736, whole... 36 2.2
UniRef50_UPI00015A700B Cluster: UPI00015A700B related cluster; n... 36 3.0
UniRef50_Q4SVM9 Cluster: Chromosome 1 SCAF13750, whole genome sh... 36 3.0
UniRef50_Q4RKB4 Cluster: Chromosome 18 SCAF15030, whole genome s... 35 3.9
UniRef50_A0A2I3 Cluster: Cadherin EGF LAG seven-pass G-type rece... 35 3.9
UniRef50_Q8II84 Cluster: Putative uncharacterized protein; n=1; ... 35 3.9
UniRef50_O43952 Cluster: G-quartet DNA-binding protein TGP1; n=2... 35 3.9
UniRef50_UPI0000E46DFB Cluster: PREDICTED: hypothetical protein;... 35 5.2
UniRef50_O87582 Cluster: Outer membrane protein; n=6; Mycoplasma... 35 5.2
UniRef50_Q5TAN1 Cluster: Protocadherin 8; n=14; Tetrapoda|Rep: P... 35 5.2
UniRef50_O95206 Cluster: Protocadherin-8 precursor; n=16; Tetrap... 35 5.2
UniRef50_A5P4A2 Cluster: Extracellular ligand-binding receptor p... 34 6.9
UniRef50_A7ATT5 Cluster: Membrane protein, putative; n=1; Babesi... 34 6.9
UniRef50_UPI0000F1FBA8 Cluster: PREDICTED: hypothetical protein;... 34 9.1
UniRef50_Q1MX79 Cluster: Putative FAD-dependent monooxygenase; n... 34 9.1
UniRef50_A5DTU6 Cluster: Putative uncharacterized protein; n=1; ... 34 9.1
UniRef50_A0B9D2 Cluster: Putative uncharacterized protein; n=1; ... 34 9.1
UniRef50_Q96JQ0 Cluster: Protocadherin-16 precursor; n=12; Amnio... 34 9.1
>UniRef50_Q9V5N8 Cluster: Protocadherin-like wing polarity protein
stan precursor; n=10; Sophophora|Rep: Protocadherin-like
wing polarity protein stan precursor - Drosophila
melanogaster (Fruit fly)
Length = 3574
Score = 390 bits (961), Expect = e-107
Identities = 205/381 (53%), Positives = 261/381 (68%), Gaps = 19/381 (4%)
Query: 19 RAYLIIVPDSAPPGHLVLDAAVYKLGSERTYTIDVHRTANFVHHILRVNKTSGLVTLRKR 78
++YLIIV + PPG ++ +A+VYKLGSER Y I+ H++ANFVHH++ VN G + LRK
Sbjct: 28 KSYLIIVHEDTPPGTVIFNASVYKLGSERHYKINAHKSANFVHHLVSVNHKDGQIQLRKA 87
Query: 79 LRCDGILYPNLFTFYVDSTSERIRDIDYYSLPIRILVTGEDCSRRHADLYDIDFDRVYDQ 138
L+CDGI YPNLFTFYVDSTS R+R IDYYSLP+RI V+G C+ ++ Y++
Sbjct: 88 LKCDGIYYPNLFTFYVDSTSNRLRSIDYYSLPVRIFVSGHSCNEDRRIEQELHHHH-YEE 146
Query: 139 NDAALQYEDSYTIRDKREVVYQESIDWRLLEAEELVSSQYNVLSTAYPWSDAMFEESV-- 196
D Y+ R +R QE I + EE+ ST + D +F +S
Sbjct: 147 ED-----NTGYSKRRRRRST-QEMIQLNGNQLEEVFRQN----STEFRAGDLIFGDSFDN 196
Query: 197 -ARNR--SRTKRS-HSLVPFDM--AIDVKIAEAKQWISETYASFAIPTTDRWQGICLKQS 250
R+R SR +R+ S P + A+ +I++AKQWISETYAS+AI TTD+W ICL++S
Sbjct: 197 EMRHRILSRKRRAVGSPDPLHLQPALHRRISDAKQWISETYASYAIHTTDKWNQICLRRS 256
Query: 251 QFVNSLTAFLPRTVQKMCKVQFLDVSDPRFLIENSQGDLVAADDVCIQEPMWKVSILFTF 310
QF+NSL AFLPR+V + CKV FLDV+D RF IE+ DLVA+ DVCI E MWKVSI F
Sbjct: 257 QFINSLNAFLPRSVCQHCKVSFLDVNDERFAIEHQSRDLVASRDVCIAESMWKVSITFNI 316
Query: 311 NCDQTYIVDSDHRLKIVYHHKELNDTDIAKRVKRELRNQSPYFEQALYVASVAEEQPPGV 370
CD+ IVDSDHRLKIVYHH+E NDTDIA+RV+RELRNQSPYFEQALYVASV EEQP G
Sbjct: 317 RCDRRDIVDSDHRLKIVYHHQEFNDTDIARRVRRELRNQSPYFEQALYVASVLEEQPAGA 376
Query: 371 IVTTVKARSRKQSRDIFDVKS 391
VTTV+AR + S ++ + S
Sbjct: 377 AVTTVRARDPEDSPVVYSMVS 397
Score = 35.1 bits (77), Expect = 3.9
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 344 RELRNQSPYFEQALYVASVAEEQPPGVIVTTVKA 377
+++ + P F Y A+V E+QPPG VTTV A
Sbjct: 785 QDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTA 818
>UniRef50_Q7PPU8 Cluster: ENSANGP00000001238; n=2; Culicidae|Rep:
ENSANGP00000001238 - Anopheles gambiae str. PEST
Length = 3543
Score = 380 bits (935), Expect = e-104
Identities = 190/381 (49%), Positives = 261/381 (68%), Gaps = 12/381 (3%)
Query: 17 TTRAYLIIVPDSAPPGHLVLDAAVYKLGSERTYTIDVHRTANFVHHILRVNKTSGLVTLR 76
T Y+II + PG ++ +++VYKLGSER Y I+ H++A++VHH+LRV+ +G V+L+
Sbjct: 27 TCNGYMIIASEDDEPGKILFNSSVYKLGSERQYKINAHKSAHYVHHLLRVDPDNGQVSLK 86
Query: 77 KRLRCDGILYPNLFTFYVDSTSERIRDIDYYSLPIRILVTGEDCSRRHADLYDIDFDRVY 136
++L+CDGI YP LFTFYVDSTS R+R IDYYSLPIRI + G +CS + F +++
Sbjct: 87 RKLKCDGIYYPTLFTFYVDSTSNRLRSIDYYSLPIRIFIVGRNCSDED-EAVAASFRKLF 145
Query: 137 DQNDAALQYEDSYTIRDKREVVYQ-ESIDWRLLEAEELVSSQYNVLSTAYPWSDAMFE-- 193
+++D + R +RE VY+ + L E ++ T + D +F+
Sbjct: 146 EEDDTGYHHHQ----RHRREAVYRLATAKDTPLPVREDDDAEDVTNYTTFREGDILFDTV 201
Query: 194 -ESVARNRSRTKRSHSL--VPFDMAIDVKIAEAKQWISETYASFAIPTTDRWQGICLKQS 250
E+ R+ T++ + +P D I KIA+AKQWISETYAS+AI TTD+W+ ICLK+S
Sbjct: 202 LENEYRHGIITRKRREIRDLPADR-IHRKIADAKQWISETYASYAIHTTDKWKHICLKKS 260
Query: 251 QFVNSLTAFLPRTVQKMCKVQFLDVSDPRFLIENSQGDLVAADDVCIQEPMWKVSILFTF 310
Q++NS+ AFLP+TV C V++LDV+D RF IE GDL+A D+CI E +WKV I +
Sbjct: 261 QYINSIGAFLPKTVLHHCTVRYLDVNDERFEIETRTGDLIATGDLCIPETLWKVIITYNV 320
Query: 311 NCDQTYIVDSDHRLKIVYHHKELNDTDIAKRVKRELRNQSPYFEQALYVASVAEEQPPGV 370
CD+ I+D+DHRLKIVYHH+ELNDTDIAKRV+RELRNQSPYFEQALYVASV EEQPPG
Sbjct: 321 RCDRKDIIDADHRLKIVYHHQELNDTDIAKRVRRELRNQSPYFEQALYVASVLEEQPPGA 380
Query: 371 IVTTVKARSRKQSRDIFDVKS 391
V TV+AR + S ++ + S
Sbjct: 381 NVITVRARDPEDSPVVYSLVS 401
Score = 34.7 bits (76), Expect = 5.2
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 344 RELRNQSPYFEQALYVASVAEEQPPGVIVTTVKA 377
+++ + P F Y A +AE+QPPG VTTV A
Sbjct: 805 QDVNDNDPTFSPKYYEAMLAEDQPPGTPVTTVTA 838
>UniRef50_UPI0000DB794E Cluster: PREDICTED: similar to
Protocadherin-like wing polarity protein stan precursor
(Protein starry night) (Protein flamingo); n=2;
Apocrita|Rep: PREDICTED: similar to Protocadherin-like
wing polarity protein stan precursor (Protein starry
night) (Protein flamingo) - Apis mellifera
Length = 3166
Score = 190 bits (463), Expect = 7e-47
Identities = 83/160 (51%), Positives = 123/160 (76%), Gaps = 1/160 (0%)
Query: 220 IAEAKQWISETYASFAIPTTDRWQGICLKQSQFVNSLTAFLPRTVQKMCKVQFLDVSDPR 279
+A + W +ET AS+A+P+T+R+ +CL+ SQ V +L FLP+T K C+ ++ V+DPR
Sbjct: 127 LAATRGWTAETLASYAMPSTERFTEVCLRTSQLVAALRDFLPQTALKECETRWGGVADPR 186
Query: 280 FLIENSQGDLVAADDVCIQEPMWKVSILFTFNCD-QTYIVDSDHRLKIVYHHKELNDTDI 338
FLIE + GDLV+A + C+ +P+WKVS+ C ++ + D++HRLKIV+HH++L+DTD+
Sbjct: 187 FLIEGAAGDLVSATEQCLVDPLWKVSVSMNLRCGMESRLTDAEHRLKIVFHHRQLDDTDL 246
Query: 339 AKRVKRELRNQSPYFEQALYVASVAEEQPPGVIVTTVKAR 378
+RV+REL+NQSPYFEQ+LYVA V EE+ PGV VT+V+AR
Sbjct: 247 GRRVRRELKNQSPYFEQSLYVAVVEEEKEPGVYVTSVRAR 286
Score = 109 bits (261), Expect = 2e-22
Identities = 55/112 (49%), Positives = 72/112 (64%), Gaps = 4/112 (3%)
Query: 18 TRAYLIIVPDSAPPGHLVLDAAVYKLGSERTYTIDVHRTANFVHHILRVNKTSGLVTLRK 77
T AYL +V + P G +V +A V +LG R Y + RTA F +L+V+ +G VTL +
Sbjct: 18 TDAYLAVVSSNTPAGSVVFEAGVPQLGGRRKYEVSSERTAWFARKLLKVHPHTGRVTLAR 77
Query: 78 RLRCDGILYPNLFTFYVDSTSERI--RDIDYYSLPIRILVTGEDCSRRHADL 127
L CDG+ YP +FTFYVDSTS R+ IDYYSLP+RIL+TG C + DL
Sbjct: 78 PLSCDGLQYPRIFTFYVDSTSSRLGRPTIDYYSLPLRILITG--CGGENRDL 127
>UniRef50_Q6V1P9 Cluster: Dachsous-2; n=9; Eutheria|Rep: Dachsous-2 -
Homo sapiens (Human)
Length = 2916
Score = 37.9 bits (84), Expect = 0.56
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 307 LFTFNCDQTYIVDSDHRLKIVYHHK---ELNDTDIAKRVKRELRNQSPYFEQALYVASVA 363
L T C Y + + H L ++ L+ + ++ +++P F+Q LY ASV
Sbjct: 1220 LLTTTCPLDYEMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVK 1279
Query: 364 EEQPPGVIVTTVKARSR 380
E Q PG VT V+A R
Sbjct: 1280 ENQNPGEFVTRVEALDR 1296
>UniRef50_UPI0000DB71FC Cluster: PREDICTED: similar to Cad87A
CG6977-PA; n=2; Endopterygota|Rep: PREDICTED: similar to
Cad87A CG6977-PA - Apis mellifera
Length = 1907
Score = 36.7 bits (81), Expect = 1.3
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 346 LRNQSPYFEQALYVASVAEEQPPGVIVTTVKA 377
+ +Q P FE+ LY ASV E PPG V VKA
Sbjct: 1013 INDQDPKFEKELYNASVKENSPPGTHVIVVKA 1044
>UniRef50_UPI0000F3174E Cluster: dachsous 2 isoform 1; n=9;
Theria|Rep: dachsous 2 isoform 1 - Bos Taurus
Length = 2131
Score = 36.7 bits (81), Expect = 1.3
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 345 ELRNQSPYFEQALYVASVAEEQPPGVIVTTVKARSR 380
++ +++P F+Q LY ASV E Q PG VT V+A R
Sbjct: 475 DVNDEAPVFKQHLYEASVKENQNPGEFVTRVEAVDR 510
>UniRef50_A1HSQ7 Cluster: D-isomer specific 2-hydroxyacid
dehydrogenase, NAD-binding; n=1; Thermosinus
carboxydivorans Nor1|Rep: D-isomer specific
2-hydroxyacid dehydrogenase, NAD-binding - Thermosinus
carboxydivorans Nor1
Length = 317
Score = 36.7 bits (81), Expect = 1.3
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 204 KRSHSLVPFDMAIDVKIAEAKQWISETYASFAIPTTDRWQGICLKQSQFVNSLTAFLPRT 263
KR+H+ +A D++ +Q + E Y +P D CL Q+ F++ LP T
Sbjct: 161 KRAHAFGMKIIAYDIR---PRQDMIENYGVTYLPMAD-----CLAQADFLSLHAPALPET 212
Query: 264 VQKMCKVQFLDVSDPRFLIENSQGDLVAADDV 295
+ + K + FLI ++GDL+ +D+
Sbjct: 213 IGMINKDTLKTMKRTAFLINTARGDLIVEEDL 244
>UniRef50_A7SAP5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 4354
Score = 36.7 bits (81), Expect = 1.3
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 351 PYFEQALYVASVAEEQPPGVIVTTVKAR 378
PYF Q +Y+A V E QP G VT V R
Sbjct: 587 PYFSQPIYIAQVPENQPSGTFVTVVVGR 614
>UniRef50_Q4SFY3 Cluster: Chromosome 7 SCAF14601, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 7
SCAF14601, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 411
Score = 36.3 bits (80), Expect = 1.7
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 18 TRAYLIIVPDSAPPGHLVLDAAVYKLGSERTYTIDVHRTANFVHHILRVNKTSGLVTLRK 77
TR YL +V A P L+ +A Y LGS +D + + F+ H + + T K
Sbjct: 215 TRKYLSVVYSCAVPQTLLREADPYSLGSPSPSPVDADQGSCFITHTPTSHLEQPVSTESK 274
Query: 78 RLRCDGILYPNLFTF-YVDSTSERIRDIDYYSLPIRILVT 116
R G + +L TF YV E + S+ + +L+T
Sbjct: 275 RPDHSGTMSSSLLTFAYVTEHREMAALLFTSSVCLGLLLT 314
>UniRef50_A7RKF4 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 2493
Score = 36.3 bits (80), Expect = 1.7
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 340 KRVKRELRNQSPYFEQALYVASVAEEQPPGVIVTTVKARSRKQS 383
K + ++++ P FE+ LY +V E+ PP V TVKA+S+ S
Sbjct: 739 KVILEDVKDSPPLFEKPLYEVTVPEDTPPRSPVITVKAKSQDLS 782
>UniRef50_Q5W7K5 Cluster: Protocadherin-gamma; n=27;
Clupeocephala|Rep: Protocadherin-gamma - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 599
Score = 35.9 bits (79), Expect = 2.2
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 345 ELRNQSPYFEQALYVASVAEEQPPGVIVTTVKAR 378
++ + +P FEQ+ Y ASV E PG+ + TV+AR
Sbjct: 95 DVNDNAPVFEQSSYQASVQENNTPGLSIFTVRAR 128
>UniRef50_Q4T6J0 Cluster: Chromosome undetermined SCAF8736, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF8736, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1582
Score = 35.9 bits (79), Expect = 2.2
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 334 NDTDIAKRVKRELRNQSPYFEQALYVASVAEEQPPGVIVTTVKAR 378
N D KR+ ++ + +P FE++ Y A + E PG+ + TV+AR
Sbjct: 430 NQADGGKRIS-DVNDNAPVFERSSYQAYIVENNTPGLSIFTVRAR 473
>UniRef50_UPI00015A700B Cluster: UPI00015A700B related cluster; n=1;
Danio rerio|Rep: UPI00015A700B UniRef100 entry - Danio
rerio
Length = 3528
Score = 35.5 bits (78), Expect = 3.0
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 345 ELRNQSPYFEQALYVASVAEEQPPGVIVTTVKARSRKQ---SRDIFDVKST 392
+ + +P Q +Y S+AE P G ++TTV A Q SR F + ST
Sbjct: 2227 DANDNAPVCSQTVYKTSIAENSPKGTVLTTVSASDADQGSNSRITFSISST 2277
Score = 34.3 bits (75), Expect = 6.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 345 ELRNQSPYFEQALYVASVAEEQPPGVIVTTVKA 377
++ + +P F Q +Y ASV E P G +TTV A
Sbjct: 1570 DVNDNAPVFNQTVYRASVTENAPKGTYITTVNA 1602
Score = 34.3 bits (75), Expect = 6.9
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 345 ELRNQSPYFEQALYVASVAEEQPPGVIVTTVKARSRKQ 382
+ + +P F Q +Y +V E P G IVTTV A Q
Sbjct: 1904 DANDNAPVFSQTVYKTAVTENSPKGTIVTTVSASDLDQ 1941
>UniRef50_Q4SVM9 Cluster: Chromosome 1 SCAF13750, whole genome
shotgun sequence; n=11; Clupeocephala|Rep: Chromosome 1
SCAF13750, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 4362
Score = 35.5 bits (78), Expect = 3.0
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 345 ELRNQSPYFEQALYVASVAEEQPPGVIVTTVKA 377
++ + SP F + +Y ASV E PPG +VT V A
Sbjct: 224 DVNDNSPVFTKEVYSASVNENSPPGTLVTRVNA 256
>UniRef50_Q4RKB4 Cluster: Chromosome 18 SCAF15030, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 18
SCAF15030, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1521
Score = 35.1 bits (77), Expect = 3.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 345 ELRNQSPYFEQALYVASVAEEQPPGVIVTTVKARSR 380
++ + SP FE++ Y A +AE PPG V V+A R
Sbjct: 398 DVNDNSPQFERSTYEAEMAENAPPGTPVLQVRASDR 433
>UniRef50_A0A2I3 Cluster: Cadherin EGF LAG seven-pass G-type
receptor-like protein; n=1; Xenopus tropicalis|Rep:
Cadherin EGF LAG seven-pass G-type receptor-like protein
- Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 258
Score = 35.1 bits (77), Expect = 3.9
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 340 KRVKRELRNQSPYFEQALYVASVAEEQPPGVIVTTVKA 377
KR+KR N SP F+ Y ASV E +P G VT+++A
Sbjct: 192 KRIKRST-NSSPQFQLHNYQASVPENEPAGTRVTSLRA 228
>UniRef50_Q8II84 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 409
Score = 35.1 bits (77), Expect = 3.9
Identities = 16/58 (27%), Positives = 35/58 (60%)
Query: 138 QNDAALQYEDSYTIRDKREVVYQESIDWRLLEAEELVSSQYNVLSTAYPWSDAMFEES 195
+ND +Q E+ TI++++E++ ++ D + E +EL+ + N L+ ++ M EE+
Sbjct: 146 ENDLTVQEENDITIQEEKELIGEKYNDMTVQEEKELIDEKENDLTVQENKTERMVEEN 203
>UniRef50_O43952 Cluster: G-quartet DNA-binding protein TGP1; n=2;
Tetrahymena thermophila|Rep: G-quartet DNA-binding
protein TGP1 - Tetrahymena thermophila
Length = 725
Score = 35.1 bits (77), Expect = 3.9
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 316 YIVDSDHRLKIVYHHKELNDTDIAKRVKRELRNQSPYFEQALYVASVAEEQPPGVIVTTV 375
YI+ SDH + V + L++ ++ R K N +P F + +V V EE+ G I T
Sbjct: 389 YIILSDHNINNVNLNNNLSNLELTARPK----NPNPRFIKGEFV-GVKEEEKDGNIQYTY 443
Query: 376 KARSRKQSRDIFDV--KSTRLEIGWHVRCGHEIGRGDHTSKAGSRETRCTLLQGCGSRRH 433
RS++ + K T L++G EI + D K S Q G+R H
Sbjct: 444 TVRSKEGEEQSITIRNKITTLKVG-------EIHKIDRERKRSSSRPNHQGGQR-GNRSH 495
Query: 434 LSAKKRNYDFTGKYWLAKRNRGNK 457
S RN K+ ++ N+ NK
Sbjct: 496 -SQNNRNQRNRDKHHNSQNNQPNK 518
>UniRef50_UPI0000E46DFB Cluster: PREDICTED: hypothetical protein; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 3342
Score = 34.7 bits (76), Expect = 5.2
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 345 ELRNQSPYFEQALYVASVAEEQPPGVIVTTVKA 377
++ +Q P FEQ++YV +V+E Q PG V V A
Sbjct: 1648 DVNDQPPRFEQSIYVMNVSESQAPGTYVGMVVA 1680
>UniRef50_O87582 Cluster: Outer membrane protein; n=6; Mycoplasma
hyopneumoniae|Rep: Outer membrane protein - Mycoplasma
hyopneumoniae
Length = 1144
Score = 34.7 bits (76), Expect = 5.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 116 TGEDCSRRHADLYDIDFDRVYDQNDAALQYEDSYTIRDKREVVYQESIDW 165
T +D +R D ++ DFD V + A++Y+D+ K E++ + W
Sbjct: 214 TAQDAIKRIRDFFNFDFDSVLKNKNFAIKYKDNLIFPYKIEILKNDDDSW 263
>UniRef50_Q5TAN1 Cluster: Protocadherin 8; n=14; Tetrapoda|Rep:
Protocadherin 8 - Homo sapiens (Human)
Length = 973
Score = 34.7 bits (76), Expect = 5.2
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 348 NQSPYFEQALYVASVAEEQPPGVIVTTVKARSRKQSRD 385
+ +P F + +Y SV E PPG + TV AR R R+
Sbjct: 492 DNAPLFTRPVYEVSVRENNPPGAYLATVAARDRDLGRN 529
>UniRef50_O95206 Cluster: Protocadherin-8 precursor; n=16;
Tetrapoda|Rep: Protocadherin-8 precursor - Homo sapiens
(Human)
Length = 1070
Score = 34.7 bits (76), Expect = 5.2
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 348 NQSPYFEQALYVASVAEEQPPGVIVTTVKARSRKQSRD 385
+ +P F + +Y SV E PPG + TV AR R R+
Sbjct: 492 DNAPLFTRPVYEVSVRENNPPGAYLATVAARDRDLGRN 529
>UniRef50_A5P4A2 Cluster: Extracellular ligand-binding receptor
precursor; n=2; Methylobacterium sp. 4-46|Rep:
Extracellular ligand-binding receptor precursor -
Methylobacterium sp. 4-46
Length = 407
Score = 34.3 bits (75), Expect = 6.9
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 38 AAVYKLGSERTYTIDVHRT--ANFVHHILRVNKTSGLVTLRKRLRCDGILYPNLFTFYVD 95
AAVY I+ T A V LR V RLR DG L +L V
Sbjct: 311 AAVYSAVLSYLRAIEAAGTDEAGAVMAKLRTMTIDDAVIRNGRLRADGALVHDLLLLQVK 370
Query: 96 STSERIRDIDYYSLPIRILVTGEDCSRRHAD 126
SE RD D+Y+ ++ ++ GED + +D
Sbjct: 371 KPSESKRDWDFYT--VKAVLKGEDVYPKPSD 399
>UniRef50_A7ATT5 Cluster: Membrane protein, putative; n=1; Babesia
bovis|Rep: Membrane protein, putative - Babesia bovis
Length = 1820
Score = 34.3 bits (75), Expect = 6.9
Identities = 25/123 (20%), Positives = 50/123 (40%), Gaps = 5/123 (4%)
Query: 227 ISETYASFAIPTTDRWQGICLKQSQFVNSLTAFLPRTVQKMCKVQFLDVSDPRFLIENSQ 286
I+E AS+ P+ + C + + + +++P + +C + ++ D I N
Sbjct: 1635 IAEVTASYNAPSAMLFDHKCFIKEAITDQMLSYMPDISKGICHIVIPNIEDTHLSINNEF 1694
Query: 287 GDLVAA--DDVCIQEPMWKVSILFTFNCDQTYIVDSDHRLKIVYHHK--ELNDTDIAKRV 342
G + A + P+W + TFN + SD + Y K E+ T +A +
Sbjct: 1695 GFIKTAYTNSESTANPIW-IPCFITFNNGTLSLTPSDRVMAHQYSDKTIEILVTSVAYSI 1753
Query: 343 KRE 345
+
Sbjct: 1754 SHD 1756
>UniRef50_UPI0000F1FBA8 Cluster: PREDICTED: hypothetical protein;
n=2; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 841
Score = 33.9 bits (74), Expect = 9.1
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 329 HHKELNDTDIAKRVKRELRNQSPYFEQALYVASVAEEQPPGVIVTTVKA 377
H L+ ++ K V ++L + +P FEQ Y + E PG + V+A
Sbjct: 420 HGARLHGREVIKVVVQDLNDNAPKFEQTRYETDIKENNKPGEFLLKVQA 468
>UniRef50_Q1MX79 Cluster: Putative FAD-dependent monooxygenase; n=1;
Streptomyces sp. NRRL 11266|Rep: Putative FAD-dependent
monooxygenase - Streptomyces sp. NRRL 11266
Length = 500
Score = 33.9 bits (74), Expect = 9.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 413 SKAGSRETRCTLLQGCGSRRHLSAKKRNYDFTGKYWLAKR 452
S AG + RC L GC R + K+ D+ G W+ R
Sbjct: 139 SDAGEEQLRCRYLVGCDGRESIVRKQAGIDYVGDDWVIVR 178
>UniRef50_A5DTU6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 453
Score = 33.9 bits (74), Expect = 9.1
Identities = 24/119 (20%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 99 ERIRDIDYYSLPIRILVTGEDCSRRHADLYDIDFDRVYDQNDAALQYEDSYTIRDKREVV 158
E I + ++ +R ++ C+ +H Y+I +VY+ + A LQ E S +RD ++ +
Sbjct: 297 ETIHTNNTQNVQLRTVILDVQCNNQHMIDYNICQGKVYNADYANLQSEKSLAVRDFKQRL 356
Query: 159 YQ-----ESIDWRLLEA---EELVSSQYNVLSTAYPWSDAMFEESVARNRSRTKRSHSL 209
E + W+ L+A +EL+++ ++ + ++ + A + L
Sbjct: 357 QHYREVYEPVSWQELDAYDDQELITAYVKCINAGEVFDVSLGKNVTAHEEEEAEEEEEL 415
>UniRef50_A0B9D2 Cluster: Putative uncharacterized protein; n=1;
Methanosaeta thermophila PT|Rep: Putative
uncharacterized protein - Methanosaeta thermophila
(strain DSM 6194 / PT) (Methanothrixthermophila (strain
DSM 6194 / PT))
Length = 641
Score = 33.9 bits (74), Expect = 9.1
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 320 SDHRLKIVYHHKELNDTDIAKRVKRELRNQSPYFEQALYVASVAEEQPPGVIVTTVKARS 379
S RL+ + H +D D+ + + R L Y E+ A V + P + AR
Sbjct: 164 SIERLEAILHS---SDADLVRTLVRNLNMGGTYGEEVCLRAGVDKNTPATALSEEEIARV 220
Query: 380 RKQSRDIFDVKSTRLEI 396
RD+FD++ R +I
Sbjct: 221 HSALRDVFDIREIRPQI 237
>UniRef50_Q96JQ0 Cluster: Protocadherin-16 precursor; n=12;
Amniota|Rep: Protocadherin-16 precursor - Homo sapiens
(Human)
Length = 3298
Score = 33.9 bits (74), Expect = 9.1
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 344 RELRNQSPYFEQALYVASVAEEQPPGVIVTTVKA 377
+++ + P F L SVAE QPPG +VTT+ A
Sbjct: 2697 QDVNDHGPAFPLNLLSTSVAENQPPGTLVTTLHA 2730
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.322 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,789,157
Number of Sequences: 1657284
Number of extensions: 20194702
Number of successful extensions: 43770
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 43643
Number of HSP's gapped (non-prelim): 132
length of query: 460
length of database: 575,637,011
effective HSP length: 103
effective length of query: 357
effective length of database: 404,936,759
effective search space: 144562422963
effective search space used: 144562422963
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 74 (33.9 bits)
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