Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000465-TA|BGIBMGA000465-PA|undefined
(639 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28770.1 68416.m03591 expressed protein 42 0.002
At2g33360.1 68415.m04089 expressed protein 35 0.19
At1g56660.1 68414.m06516 expressed protein 35 0.19
At5g53800.1 68418.m06685 expressed protein 31 1.8
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 31 2.3
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 31 2.3
At5g56980.1 68418.m07112 expressed protein non-consensus CG dono... 30 4.1
At2g43010.2 68415.m05338 phytochrome-interacting factor 4 (PIF4)... 30 4.1
At2g43010.1 68415.m05337 phytochrome-interacting factor 4 (PIF4)... 30 4.1
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 30 4.1
At4g39040.2 68417.m05530 expressed protein contains PF01985: Unc... 30 5.4
At4g39040.1 68417.m05529 expressed protein contains PF01985: Unc... 30 5.4
At4g28790.2 68417.m04116 basic helix-loop-helix (bHLH) family pr... 30 5.4
At4g28790.1 68417.m04117 basic helix-loop-helix (bHLH) family pr... 30 5.4
At4g35940.1 68417.m05113 expressed protein 29 7.1
At4g02720.1 68417.m00368 expressed protein temporary automated f... 29 7.1
At3g59060.2 68416.m06584 basic helix-loop-helix (bHLH) family pr... 29 7.1
At3g59060.1 68416.m06583 basic helix-loop-helix (bHLH) family pr... 29 7.1
At5g15020.1 68418.m01761 paired amphipathic helix repeat-contain... 29 9.4
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 29 9.4
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 29 9.4
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 29 9.4
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 29 9.4
At2g27690.1 68415.m03355 cytochrome P450, putative similar to Cy... 29 9.4
At2g27070.1 68415.m03252 two-component responsive regulator fami... 29 9.4
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 41.5 bits (93), Expect = 0.002
Identities = 42/192 (21%), Positives = 79/192 (41%), Gaps = 7/192 (3%)
Query: 38 ECDKRIRLRRKMQSVSSNTQRDTRSSASVQYNPHK-HKARRSQFHSKYPKRHKQSYVNQL 96
E DK+ + +++ N + T+S S +K +K ++ S R K+ Y +
Sbjct: 960 EEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKK 1019
Query: 97 VKSVSEKIPHRQAVRIGSNFSFNIEFYKDVPSEQGYRRDDIKTKDRTQSEAKVKKSPAGV 156
K+ E ++ + + E K ++ R D+K K + + E K KK
Sbjct: 1020 SKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESR--DLKAKKK-EEETKEKKESENH 1076
Query: 157 QGKGHLDKICTQEGLEFKSGDGKPVQISRAVLKLYRHDSTLQSRKDFLDVEDQKENKLNK 216
+ K DK ++ K + K + K + + + +KD +EDQ NK +
Sbjct: 1077 KSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKE---EDKKDMEKLEDQNSNKKKE 1133
Query: 217 NTQANKKNKMVK 228
+ KK++ VK
Sbjct: 1134 DKNEKKKSQHVK 1145
Score = 32.3 bits (70), Expect = 1.0
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 113 GSNFSFNIEFYKDVPSEQGYRRDDIKTKDRTQSEAKVKK----SPAGVQGKGHLDKICTQ 168
G N N E K+V +++++K+ T+SE +VKK S G +GK +
Sbjct: 651 GGNADSNKE--KEVHVGDSTNDNNMESKEDTKSEVEVKKNDGSSEKGEEGKENNKDSMED 708
Query: 169 EGLEFK-----SGDGKPVQISRAVLKLY----RHDSTLQSRKDFLDVEDQKENKLNKNTQ 219
+ LE K S D K V + ++Y + D +++++ + ++ K+ K N+N
Sbjct: 709 KKLENKESQTDSKDDKSVDDKQEEAQIYGGESKDDKSVEAKGKKKESKENKKTKTNENRV 768
Query: 220 ANKKNKM 226
NK+ +
Sbjct: 769 RNKEENV 775
>At2g33360.1 68415.m04089 expressed protein
Length = 603
Score = 34.7 bits (76), Expect = 0.19
Identities = 34/156 (21%), Positives = 64/156 (41%), Gaps = 4/156 (2%)
Query: 61 RSSASVQYNPHKHKARRSQFHSKYPKRHKQSYVNQLVKSVSEKIPHRQAVRIGSNFSFNI 120
RSS Y H K R S+ K + + V S +EK RQ V S + +
Sbjct: 297 RSSLDYSYLIHLKKGRGSEPQHLVGKLKVSTLFS--VSSTNEKTVERQFVLFSSGGNPQL 354
Query: 121 EFYKDVPSEQGYRRDDIKTKDRTQSEAKVKKSPAGVQGKGHLDKICTQEGLEFKSGDGKP 180
+KD+ +G + + T+ ++ ++S + + C+ E + D +P
Sbjct: 355 PCHKDIRKNRGLPKKVVDALKSTKRTSR-QRSISRFSRTSSIPDFCSWEPFQEHDSDLEP 413
Query: 181 VQISRAVLKLYRHDSTLQSRKDFLDVEDQKENKLNK 216
+ + L S + R+ F VE+++E ++ K
Sbjct: 414 ISLLDNDLPPNLETSAVVVREQF-PVEEEEEEEVEK 448
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 34.7 bits (76), Expect = 0.19
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Query: 129 EQGYRRDDIKTKDRTQSEAKVKKSPAGVQGKGHLDKICTQEGLEFKSGDGKPVQISRAVL 188
E+ +++ K KD + +E K KK + K + + L+ K G G+ +
Sbjct: 244 EKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDESTEK-EDKKLKGKKGKGEKPEKEDEGK 302
Query: 189 KLYRHDSTLQSRKDFLDVEDQKENKLNKNTQANKKNKMV 227
K HD+T Q D + D KE K KN KK + V
Sbjct: 303 KTKEHDATEQEMDD--EAADHKEGKKKKNKDKAKKKETV 339
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 31.5 bits (68), Expect = 1.8
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 409 RRKKYKREDEARQKRRRKSEKYLDKRIRKLKD 440
+RK+ +RE+E ++++RR+ EK KR + KD
Sbjct: 134 KRKRKEREEEEKERKRRRREKDKKKRNKSDKD 165
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 31.1 bits (67), Expect = 2.3
Identities = 37/170 (21%), Positives = 68/170 (40%), Gaps = 8/170 (4%)
Query: 49 MQSVSSNTQRDTRSSASVQYNPHKHKARRSQFHSKYPKRHKQSYVNQLVKSVSEKIPHRQ 108
M V+ T+ D + S S + + HK + HS+ +H+ S ++ + HR
Sbjct: 641 MDEVTEETKTDKKHSCSRKRHKHKTRYSSKDRHSRDKHKHESSSDDEYHSRSRHR--HRH 698
Query: 109 AVRIGSNFSFNIEFYKDVPSEQGYR-RDDIKTKDRTQSEAKVKKSPAGVQGKGHLDKICT 167
S S E Y +E +R R +KD S+ K + + H D
Sbjct: 699 -----SKSSDRHELYDSSDNEGEHRHRSSKHSKDVDYSKDKRSHHHRSRKHEKHRDSSDD 753
Query: 168 QEGLEFKSGDGKPVQISRAVLKLYRHDSTLQSRKDFLDVEDQKENKLNKN 217
+ + + S V +RH S+ + +KD VE++ +K +++
Sbjct: 754 EHHHHRHRSSRRKHEDSSDVEHGHRHKSSKRIKKDEKTVEEETVSKSDQS 803
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 31.1 bits (67), Expect = 2.3
Identities = 37/170 (21%), Positives = 68/170 (40%), Gaps = 8/170 (4%)
Query: 49 MQSVSSNTQRDTRSSASVQYNPHKHKARRSQFHSKYPKRHKQSYVNQLVKSVSEKIPHRQ 108
M V+ T+ D + S S + + HK + HS+ +H+ S ++ + HR
Sbjct: 641 MDEVTEETKTDKKHSCSRKRHKHKTRYSSKDRHSRDKHKHESSSDDEYHSRSRHR--HRH 698
Query: 109 AVRIGSNFSFNIEFYKDVPSEQGYR-RDDIKTKDRTQSEAKVKKSPAGVQGKGHLDKICT 167
S S E Y +E +R R +KD S+ K + + H D
Sbjct: 699 -----SKSSDRHELYDSSDNEGEHRHRSSKHSKDVDYSKDKRSHHHRSRKHEKHRDSSDD 753
Query: 168 QEGLEFKSGDGKPVQISRAVLKLYRHDSTLQSRKDFLDVEDQKENKLNKN 217
+ + + S V +RH S+ + +KD VE++ +K +++
Sbjct: 754 EHHHHRHRSSRRKHEDSSDVEHGHRHKSSKRIKKDEKTVEEETVSKSDQS 803
>At5g56980.1 68418.m07112 expressed protein non-consensus CG donor
splice site at exon 1, GA donor splice site at exon 3
Length = 379
Score = 30.3 bits (65), Expect = 4.1
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 21 PYECEP-GVCIPGQCDPYECDKRIRLRRKMQSVSSNTQRDTRSSASVQYNP-----HKHK 74
P E +P G + Q +P + + +++S+ ++ + + NP +HK
Sbjct: 216 PEEDQPTGTGVNSQINPPGLTRAPSILERVKSIKLSSFYRSDPDLDQKQNPDPVLHEEHK 275
Query: 75 ARRSQFHSKYPKRHKQSYVNQLVKSVSEK 103
RS+ SK P + K+ + ++ KS SEK
Sbjct: 276 HVRSKSESKKPVKKKKKALTKMTKSASEK 304
>At2g43010.2 68415.m05338 phytochrome-interacting factor 4 (PIF4) /
basic helix-loop-helix protein 9 (bHLH9) / short under
red-light 2 (SRL2) identical to SP|Q8W2F3
Phytochrome-interacting factor 4 (Basic helix-loop-helix
protein 9) (bHLH9) (Short under red-light 2)
{Arabidopsis thaliana}; supporting cDNA
gi|18026965|gb|AF251694.1|AF251694
Length = 428
Score = 30.3 bits (65), Expect = 4.1
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 41 KRIRLRRKMQSVSSNTQRDTRSSASVQYNPHKHKARRSQFHSKYPKRHKQSYVNQLVKSV 100
KR R+ +SVS + D + S Q + ++R ++ H+ +R ++ +N+ +K++
Sbjct: 225 KRKRINHTDESVSLS---DAIGNKSNQRSGSNRRSRAAEVHN-LSERRRRDRINERMKAL 280
Query: 101 SEKIPHRQAVRIGSNFSFNIEFYKDV 126
E IPH S I++ K +
Sbjct: 281 QELIPHCSKTDKASILDEAIDYLKSL 306
>At2g43010.1 68415.m05337 phytochrome-interacting factor 4 (PIF4) /
basic helix-loop-helix protein 9 (bHLH9) / short under
red-light 2 (SRL2) identical to SP|Q8W2F3
Phytochrome-interacting factor 4 (Basic helix-loop-helix
protein 9) (bHLH9) (Short under red-light 2)
{Arabidopsis thaliana}; supporting cDNA
gi|18026965|gb|AF251694.1|AF251694
Length = 430
Score = 30.3 bits (65), Expect = 4.1
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 41 KRIRLRRKMQSVSSNTQRDTRSSASVQYNPHKHKARRSQFHSKYPKRHKQSYVNQLVKSV 100
KR R+ +SVS + D + S Q + ++R ++ H+ +R ++ +N+ +K++
Sbjct: 225 KRKRINHTDESVSLS---DAIGNKSNQRSGSNRRSRAAEVHN-LSERRRRDRINERMKAL 280
Query: 101 SEKIPHRQAVRIGSNFSFNIEFYKDV 126
E IPH S I++ K +
Sbjct: 281 QELIPHCSKTDKASILDEAIDYLKSL 306
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 30.3 bits (65), Expect = 4.1
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 409 RRKKYKREDEARQKRRRKSEKYLDKRIRKLKD 440
R+++ REDE R++RRR+ E DK R+ +D
Sbjct: 444 RKERESREDEDRRRRRRREES-RDKESRRERD 474
>At4g39040.2 68417.m05530 expressed protein contains PF01985:
Uncharacterised protein family
Length = 280
Score = 29.9 bits (64), Expect = 5.4
Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 9/172 (5%)
Query: 63 SASVQYNPHKHKARRSQFHSKYPKRHKQSYVNQLVKSVSEKIPHRQAVRIGSNFSFNIEF 122
SASV + H++K R F SK H S V + S+ E P + + F+ E
Sbjct: 39 SASVSQSNHRNKPRFQSFSSKPLPCHSASLVVKSFSSIDE--PDLEEDEESEDEDFSAEE 96
Query: 123 YKDVPSEQGYRRDDIKTKDRTQSEAKVKKSPAGVQGKGHLDKICTQEGLEFKSGDGKPVQ 182
Y+ E+ +D + SE ++ S A + DK E + K G ++
Sbjct: 97 YEYEDEEE----EDEQDSGVVVSERGIEDSEASEEVSEIGDKEEKTENTKKKKSRGSALK 152
Query: 183 IS---RAVLKLYRHDSTLQSRKDFLDVEDQKENKLNKNTQANKKNKMVKFSI 231
+S + L Y H + + + ++ + + +KN+++K I
Sbjct: 153 LSIKEKKELASYAHSLGDKLKCQLVGKSGVTDSVVFSFLETLEKNELLKVKI 204
>At4g39040.1 68417.m05529 expressed protein contains PF01985:
Uncharacterised protein family
Length = 296
Score = 29.9 bits (64), Expect = 5.4
Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 9/172 (5%)
Query: 63 SASVQYNPHKHKARRSQFHSKYPKRHKQSYVNQLVKSVSEKIPHRQAVRIGSNFSFNIEF 122
SASV + H++K R F SK H S V + S+ E P + + F+ E
Sbjct: 39 SASVSQSNHRNKPRFQSFSSKPLPCHSASLVVKSFSSIDE--PDLEEDEESEDEDFSAEE 96
Query: 123 YKDVPSEQGYRRDDIKTKDRTQSEAKVKKSPAGVQGKGHLDKICTQEGLEFKSGDGKPVQ 182
Y+ E+ +D + SE ++ S A + DK E + K G ++
Sbjct: 97 YEYEDEEE----EDEQDSGVVVSERGIEDSEASEEVSEIGDKEEKTENTKKKKSRGSALK 152
Query: 183 IS---RAVLKLYRHDSTLQSRKDFLDVEDQKENKLNKNTQANKKNKMVKFSI 231
+S + L Y H + + + ++ + + +KN+++K I
Sbjct: 153 LSIKEKKELASYAHSLGDKLKCQLVGKSGVTDSVVFSFLETLEKNELLKVKI 204
>At4g28790.2 68417.m04116 basic helix-loop-helix (bHLH) family
protein contains Pfam domain, PF00010: Helix-loop-helix
DNA-binding domain
Length = 340
Score = 29.9 bits (64), Expect = 5.4
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 40 DKRIRLRRKMQSVSSNTQRDTRSSASVQYNPHKHKARRSQFHSKYPKRHKQSYVNQLVKS 99
D+R R R+ +V + + R S S K R+ K +R ++ +N+++K+
Sbjct: 247 DERKRKTREETNVENQGTEEARDSTS-------SKRSRAAIMHKLSERRRRQKINEMMKA 299
Query: 100 VSEKIPHRQAVRIGSNFSFNIEFYKDVPSE 129
+ E +P S IE+ K + S+
Sbjct: 300 LQELLPRCTKTDRSSMLDDVIEYVKSLQSQ 329
>At4g28790.1 68417.m04117 basic helix-loop-helix (bHLH) family
protein contains Pfam domain, PF00010: Helix-loop-helix
DNA-binding domain
Length = 413
Score = 29.9 bits (64), Expect = 5.4
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 40 DKRIRLRRKMQSVSSNTQRDTRSSASVQYNPHKHKARRSQFHSKYPKRHKQSYVNQLVKS 99
D+R R R+ +V + + R S S K R+ K +R ++ +N+++K+
Sbjct: 247 DERKRKTREETNVENQGTEEARDSTS-------SKRSRAAIMHKLSERRRRQKINEMMKA 299
Query: 100 VSEKIPHRQAVRIGSNFSFNIEFYKDVPSE 129
+ E +P S IE+ K + S+
Sbjct: 300 LQELLPRCTKTDRSSMLDDVIEYVKSLQSQ 329
>At4g35940.1 68417.m05113 expressed protein
Length = 451
Score = 29.5 bits (63), Expect = 7.1
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 40 DKRIRLRRKMQSVSSNTQRDTRSSASVQYNPHKHKARRSQFHSKYPKRH--KQSYVNQLV 97
DK+ + RK + +R R V HK RR + +K H K+S VN L
Sbjct: 49 DKKDKKERKEKKEKKEKKRKEREGKEVGSEKRSHKRRRKEDGAKVDLFHKLKESEVNCLE 108
Query: 98 KS 99
KS
Sbjct: 109 KS 110
>At4g02720.1 68417.m00368 expressed protein temporary automated
functional assignment
Length = 422
Score = 29.5 bits (63), Expect = 7.1
Identities = 30/142 (21%), Positives = 60/142 (42%), Gaps = 6/142 (4%)
Query: 87 RHKQSYVNQLVKSVSEKIPHRQAVRIGSNFSFNIEFYKDVPSE-QGYRRDDIKTKDRTQS 145
R S ++ +K +S + +R+ R+ S F+++ PS + D + D Q
Sbjct: 25 RRSGSDSDEELKGLSHE-EYRRQKRLKMRKSAKFCFWENTPSPPRDQNEDSDENADEIQD 83
Query: 146 EAKVKK--SPAGVQGKGHLDKICTQEGLEFKSGDGKPVQISRAVLKLYRHDSTLQSRKDF 203
+ ++ + G + KG D +GL + K + R + Y DS +S
Sbjct: 84 KNGGERDDNSKGKERKGKSDSESESDGLRSRKRKSKSSRSKRRRKRSY--DSDSESEGSE 141
Query: 204 LDVEDQKENKLNKNTQANKKNK 225
D E++ + K++ KK++
Sbjct: 142 SDSEEEDRRRRRKSSSKRKKSR 163
>At3g59060.2 68416.m06584 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 444
Score = 29.5 bits (63), Expect = 7.1
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 54 SNTQRDTRSSASVQYNPHKHKARRSQFHSKYPKRHKQSYVNQLVKSVSEKIPHRQAVRIG 113
++T T + S Q + ++R ++ H+ +R ++ +N+ +K++ E IPH
Sbjct: 234 TSTDDQTMGNKSSQRSGSTRRSRAAEVHN-LSERRRRDRINERMKALQELIPHCSRTDKA 292
Query: 114 SNFSFNIEFYKDV 126
S I++ K +
Sbjct: 293 SILDEAIDYLKSL 305
>At3g59060.1 68416.m06583 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 442
Score = 29.5 bits (63), Expect = 7.1
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 54 SNTQRDTRSSASVQYNPHKHKARRSQFHSKYPKRHKQSYVNQLVKSVSEKIPHRQAVRIG 113
++T T + S Q + ++R ++ H+ +R ++ +N+ +K++ E IPH
Sbjct: 234 TSTDDQTMGNKSSQRSGSTRRSRAAEVHN-LSERRRRDRINERMKALQELIPHCSRTDKA 292
Query: 114 SNFSFNIEFYKDV 126
S I++ K +
Sbjct: 293 SILDEAIDYLKSL 305
>At5g15020.1 68418.m01761 paired amphipathic helix repeat-containing
protein similar to transcription co-repressor Sin3
[Xenopus laevis] GI:4960210; contains Pfam profile
PF02671: Paired amphipathic helix repeat
Length = 1377
Score = 29.1 bits (62), Expect = 9.4
Identities = 10/32 (31%), Positives = 23/32 (71%)
Query: 407 DNRRKKYKREDEARQKRRRKSEKYLDKRIRKL 438
+ + +++KR+ EA +++ R +KY+ K I++L
Sbjct: 461 EEKDREHKRDVEAAKEKERSKDKYMGKSIQEL 492
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 14 PPIYNLEPYECEPGVCIPGQCDPYECDKRIRLRRKMQSVSSN 55
PP+Y+ +PY P Q Y D + RL RK +S +
Sbjct: 63 PPLYSTQPYSAPSYSAPPSQ--SYGSDNKKRLERKYSKISDD 102
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 14 PPIYNLEPYECEPGVCIPGQCDPYECDKRIRLRRKMQSVSSN 55
PP+Y+ +PY P Q Y D + RL RK +S +
Sbjct: 63 PPLYSTQPYSAPSYSAPPSQ--SYGSDNKKRLERKYSKISDD 102
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 14 PPIYNLEPYECEPGVCIPGQCDPYECDKRIRLRRKMQSVSSN 55
PP+Y+ +PY P Q Y D + RL RK +S +
Sbjct: 63 PPLYSTQPYSAPSYSAPPSQ--SYGSDNKKRLERKYSKISDD 102
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 14 PPIYNLEPYECEPGVCIPGQCDPYECDKRIRLRRKMQSVSSN 55
PP+Y+ +PY P Q Y D + RL RK +S +
Sbjct: 63 PPLYSTQPYSAPSYSAPPSQ--SYGSDNKKRLERKYSKISDD 102
>At2g27690.1 68415.m03355 cytochrome P450, putative similar to
Cytochrome P450 94A1 (P450-dependent fatty acid
omega-hydroxylase) (SP:O81117) {Vicia sativa}; contains
Pfam profile: PF00067 cytochrome P450; supported by
cDNA: gi_13877668
Length = 495
Score = 29.1 bits (62), Expect = 9.4
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 478 YTYDSVKSTLKHPTRIWPIIKNAILNSGAVATLKRVFRRF 517
+ ++ VK+ ++ TR+ PI+ + N G+V L+ VFRRF
Sbjct: 140 FAHEIVKTEIE--TRLLPILTSFSDNPGSVLDLQDVFRRF 177
>At2g27070.1 68415.m03252 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver domain
Length = 575
Score = 29.1 bits (62), Expect = 9.4
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 153 PAGVQGKGHLDKICTQEGLEFKSGDGKPVQISRAVLKLYRHDSTLQSRKD----FLDVED 208
PA + +LD++ E L + G ++ + D+ Q +D F+++
Sbjct: 451 PANATTQPNLDELPQLENLNLYNDLGNTSELPYNISNFQSDDNKKQGEEDGDWTFVNINQ 510
Query: 209 QKENKLNKNTQANKKNKMVKFSIDPATN 236
+ N + NT A + F+I+P N
Sbjct: 511 DQSNGESSNTIATPETNTPNFNINPNQN 538
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.133 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,512,850
Number of Sequences: 28952
Number of extensions: 448168
Number of successful extensions: 1541
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1516
Number of HSP's gapped (non-prelim): 44
length of query: 639
length of database: 12,070,560
effective HSP length: 86
effective length of query: 553
effective length of database: 9,580,688
effective search space: 5298120464
effective search space used: 5298120464
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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