Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000464-TA|BGIBMGA000464-PA|IPR007209|Possible
metal-binding region in RNase L inhibitor, RLI, IPR007177|Protein of
unknown function DUF367
(240 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017325-1|AAH17325.1| 312|Homo sapiens chromosome 16 open read... 217 3e-56
BC016699-1|AAH16699.1| 312|Homo sapiens chromosome 16 open read... 217 3e-56
BC013943-1|AAH13943.1| 312|Homo sapiens chromosome 16 open read... 217 3e-56
AL031709-5|CAB56183.1| 312|Homo sapiens novel protein containin... 217 3e-56
AE006467-2|AAK61276.1| 312|Homo sapiens similar to UND313 (S. c... 217 3e-56
U14658-1|AAA50390.1| 862|Homo sapiens hPMS2 protein. 30 8.3
U13696-1|AAA63923.1| 862|Homo sapiens hPMS2 protein. 30 8.3
BC093921-1|AAH93921.1| 862|Homo sapiens PMS2 postmeiotic segreg... 30 8.3
BC031832-1|AAH31832.1| 879|Homo sapiens PMS2 protein protein. 30 8.3
AC005995-3|AAS00390.1| 862|Homo sapiens unknown protein. 30 8.3
AB103086-1|BAD89429.1| 756|Homo sapiens postmeiotic segregation... 30 8.3
AB103082-1|BAD89425.1| 572|Homo sapiens postmeiotic segregation... 30 8.3
>BC017325-1|AAH17325.1| 312|Homo sapiens chromosome 16 open reading
frame 42 protein.
Length = 312
Score = 217 bits (530), Expect = 3e-56
Identities = 97/187 (51%), Positives = 128/187 (68%), Gaps = 1/187 (0%)
Query: 53 SVSMWDLNHCDPKKCSGRKLLRHNLIKNLKLGHRFQGLVLSPVGTQCVSPNDKNIIETFG 112
+++MW+L HCDP++C+GRKL R L++ L+LGHRF GLVLSPVG Q SP D+ ++ G
Sbjct: 59 TLAMWELGHCDPRRCTGRKLARLGLVRCLRLGHRFGGLVLSPVGKQYASPADRQLVAQSG 118
Query: 113 LAVIDCSWAKIDETPFSRMKSPHPRLLPFLVAANPINYGKPYQLSCVEALAAAMFITGHK 172
+AVIDCSWA++DETPF +M+ H RLLP+LVAANP+NYG+PY+LSCVEA AA I G
Sbjct: 119 VAVIDCSWARLDETPFGKMRGSHLRLLPYLVAANPVNYGRPYRLSCVEAFAATFCIVGFP 178
Query: 173 SEAKFYLSKFSWGHSFLELNSDALDLYAVCTDSKSVLEAQATFLESVKNEQDDRPMWPPS 232
A L KF WG FL+LN LD YA C + VL+A+ FL + K + + P
Sbjct: 179 DLAVILLRKFKWGKGFLDLNRQLLDKYAACGSPEEVLQAEQEFLANAKESPQEEEI-DPF 237
Query: 233 ESDSASD 239
+ DS +
Sbjct: 238 DVDSGRE 244
>BC016699-1|AAH16699.1| 312|Homo sapiens chromosome 16 open reading
frame 42 protein.
Length = 312
Score = 217 bits (530), Expect = 3e-56
Identities = 97/187 (51%), Positives = 128/187 (68%), Gaps = 1/187 (0%)
Query: 53 SVSMWDLNHCDPKKCSGRKLLRHNLIKNLKLGHRFQGLVLSPVGTQCVSPNDKNIIETFG 112
+++MW+L HCDP++C+GRKL R L++ L+LGHRF GLVLSPVG Q SP D+ ++ G
Sbjct: 59 TLAMWELGHCDPRRCTGRKLARLGLVRCLRLGHRFGGLVLSPVGKQYASPADRQLVAQSG 118
Query: 113 LAVIDCSWAKIDETPFSRMKSPHPRLLPFLVAANPINYGKPYQLSCVEALAAAMFITGHK 172
+AVIDCSWA++DETPF +M+ H RLLP+LVAANP+NYG+PY+LSCVEA AA I G
Sbjct: 119 VAVIDCSWARLDETPFGKMRGSHLRLLPYLVAANPVNYGRPYRLSCVEAFAATFCIVGFP 178
Query: 173 SEAKFYLSKFSWGHSFLELNSDALDLYAVCTDSKSVLEAQATFLESVKNEQDDRPMWPPS 232
A L KF WG FL+LN LD YA C + VL+A+ FL + K + + P
Sbjct: 179 DLAVILLRKFKWGKGFLDLNRQLLDKYAACGSPEEVLQAEQEFLANAKESPQEEEI-DPF 237
Query: 233 ESDSASD 239
+ DS +
Sbjct: 238 DVDSGRE 244
>BC013943-1|AAH13943.1| 312|Homo sapiens chromosome 16 open reading
frame 42 protein.
Length = 312
Score = 217 bits (530), Expect = 3e-56
Identities = 97/187 (51%), Positives = 128/187 (68%), Gaps = 1/187 (0%)
Query: 53 SVSMWDLNHCDPKKCSGRKLLRHNLIKNLKLGHRFQGLVLSPVGTQCVSPNDKNIIETFG 112
+++MW+L HCDP++C+GRKL R L++ L+LGHRF GLVLSPVG Q SP D+ ++ G
Sbjct: 59 TLAMWELGHCDPRRCTGRKLARLGLVRCLRLGHRFGGLVLSPVGKQYASPADRQLVAQSG 118
Query: 113 LAVIDCSWAKIDETPFSRMKSPHPRLLPFLVAANPINYGKPYQLSCVEALAAAMFITGHK 172
+AVIDCSWA++DETPF +M+ H RLLP+LVAANP+NYG+PY+LSCVEA AA I G
Sbjct: 119 VAVIDCSWARLDETPFGKMRGSHLRLLPYLVAANPVNYGRPYRLSCVEAFAATFCIVGFP 178
Query: 173 SEAKFYLSKFSWGHSFLELNSDALDLYAVCTDSKSVLEAQATFLESVKNEQDDRPMWPPS 232
A L KF WG FL+LN LD YA C + VL+A+ FL + K + + P
Sbjct: 179 DLAVILLRKFKWGKGFLDLNRQLLDKYAACGSPEEVLQAEQEFLANAKESPQEEEI-DPF 237
Query: 233 ESDSASD 239
+ DS +
Sbjct: 238 DVDSGRE 244
>AL031709-5|CAB56183.1| 312|Homo sapiens novel protein containing
RLI and DUF367 domains protein.
Length = 312
Score = 217 bits (530), Expect = 3e-56
Identities = 97/187 (51%), Positives = 128/187 (68%), Gaps = 1/187 (0%)
Query: 53 SVSMWDLNHCDPKKCSGRKLLRHNLIKNLKLGHRFQGLVLSPVGTQCVSPNDKNIIETFG 112
+++MW+L HCDP++C+GRKL R L++ L+LGHRF GLVLSPVG Q SP D+ ++ G
Sbjct: 59 TLAMWELGHCDPRRCTGRKLARLGLVRCLRLGHRFGGLVLSPVGKQYASPADRQLVAQSG 118
Query: 113 LAVIDCSWAKIDETPFSRMKSPHPRLLPFLVAANPINYGKPYQLSCVEALAAAMFITGHK 172
+AVIDCSWA++DETPF +M+ H RLLP+LVAANP+NYG+PY+LSCVEA AA I G
Sbjct: 119 VAVIDCSWARLDETPFGKMRGSHLRLLPYLVAANPVNYGRPYRLSCVEAFAATFCIVGFP 178
Query: 173 SEAKFYLSKFSWGHSFLELNSDALDLYAVCTDSKSVLEAQATFLESVKNEQDDRPMWPPS 232
A L KF WG FL+LN LD YA C + VL+A+ FL + K + + P
Sbjct: 179 DLAVILLRKFKWGKGFLDLNRQLLDKYAACGSPEEVLQAEQEFLANAKESPQEEEI-DPF 237
Query: 233 ESDSASD 239
+ DS +
Sbjct: 238 DVDSGRE 244
>AE006467-2|AAK61276.1| 312|Homo sapiens similar to UND313 (S.
cervisiae) protein.
Length = 312
Score = 217 bits (530), Expect = 3e-56
Identities = 97/187 (51%), Positives = 128/187 (68%), Gaps = 1/187 (0%)
Query: 53 SVSMWDLNHCDPKKCSGRKLLRHNLIKNLKLGHRFQGLVLSPVGTQCVSPNDKNIIETFG 112
+++MW+L HCDP++C+GRKL R L++ L+LGHRF GLVLSPVG Q SP D+ ++ G
Sbjct: 59 TLAMWELGHCDPRRCTGRKLARLGLVRCLRLGHRFGGLVLSPVGKQYASPADRQLVAQSG 118
Query: 113 LAVIDCSWAKIDETPFSRMKSPHPRLLPFLVAANPINYGKPYQLSCVEALAAAMFITGHK 172
+AVIDCSWA++DETPF +M+ H RLLP+LVAANP+NYG+PY+LSCVEA AA I G
Sbjct: 119 VAVIDCSWARLDETPFGKMRGSHLRLLPYLVAANPVNYGRPYRLSCVEAFAATFCIVGFP 178
Query: 173 SEAKFYLSKFSWGHSFLELNSDALDLYAVCTDSKSVLEAQATFLESVKNEQDDRPMWPPS 232
A L KF WG FL+LN LD YA C + VL+A+ FL + K + + P
Sbjct: 179 DLAVILLRKFKWGKGFLDLNRQLLDKYAACGSPEEVLQAEQEFLANAKESPQEEEI-DPF 237
Query: 233 ESDSASD 239
+ DS +
Sbjct: 238 DVDSGRE 244
>U14658-1|AAA50390.1| 862|Homo sapiens hPMS2 protein.
Length = 862
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 138 LLPFLVAANPINYGKPYQLSCVEALAAAMFITGHKSEAKFYLSKFSWGHSFLELNSDALD 197
L+PF+ + + Y LSC +AL +I+G S+ + + S F +N D
Sbjct: 239 LIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCD 298
Query: 198 LYAVC 202
VC
Sbjct: 299 PAKVC 303
>U13696-1|AAA63923.1| 862|Homo sapiens hPMS2 protein.
Length = 862
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 138 LLPFLVAANPINYGKPYQLSCVEALAAAMFITGHKSEAKFYLSKFSWGHSFLELNSDALD 197
L+PF+ + + Y LSC +AL +I+G S+ + + S F +N D
Sbjct: 239 LIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCD 298
Query: 198 LYAVC 202
VC
Sbjct: 299 PAKVC 303
>BC093921-1|AAH93921.1| 862|Homo sapiens PMS2 postmeiotic
segregation increased 2 (S. cerevisiae) protein.
Length = 862
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 138 LLPFLVAANPINYGKPYQLSCVEALAAAMFITGHKSEAKFYLSKFSWGHSFLELNSDALD 197
L+PF+ + + Y LSC +AL +I+G S+ + + S F +N D
Sbjct: 239 LIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCD 298
Query: 198 LYAVC 202
VC
Sbjct: 299 PAKVC 303
>BC031832-1|AAH31832.1| 879|Homo sapiens PMS2 protein protein.
Length = 879
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 138 LLPFLVAANPINYGKPYQLSCVEALAAAMFITGHKSEAKFYLSKFSWGHSFLELNSDALD 197
L+PF+ + + Y LSC +AL +I+G S+ + + S F +N D
Sbjct: 256 LIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCD 315
Query: 198 LYAVC 202
VC
Sbjct: 316 PAKVC 320
>AC005995-3|AAS00390.1| 862|Homo sapiens unknown protein.
Length = 862
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 138 LLPFLVAANPINYGKPYQLSCVEALAAAMFITGHKSEAKFYLSKFSWGHSFLELNSDALD 197
L+PF+ + + Y LSC +AL +I+G S+ + + S F +N D
Sbjct: 239 LIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCD 298
Query: 198 LYAVC 202
VC
Sbjct: 299 PAKVC 303
>AB103086-1|BAD89429.1| 756|Homo sapiens postmeiotic segregation
increased 2 nirs variant 5 protein.
Length = 756
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 138 LLPFLVAANPINYGKPYQLSCVEALAAAMFITGHKSEAKFYLSKFSWGHSFLELNSDALD 197
L+PF+ + + Y LSC +AL +I+G S+ + + S F +N D
Sbjct: 133 LIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCD 192
Query: 198 LYAVC 202
VC
Sbjct: 193 PAKVC 197
>AB103082-1|BAD89425.1| 572|Homo sapiens postmeiotic segregation
increased 2 nirs variant 1 protein.
Length = 572
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 138 LLPFLVAANPINYGKPYQLSCVEALAAAMFITGHKSEAKFYLSKFSWGHSFLELNSDALD 197
L+PF+ + + Y LSC +AL +I+G S+ + + S F +N D
Sbjct: 239 LIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCD 298
Query: 198 LYAVC 202
VC
Sbjct: 299 PAKVC 303
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.317 0.132 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,938,190
Number of Sequences: 224733
Number of extensions: 1333654
Number of successful extensions: 2256
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2244
Number of HSP's gapped (non-prelim): 12
length of query: 240
length of database: 73,234,838
effective HSP length: 88
effective length of query: 152
effective length of database: 53,458,334
effective search space: 8125666768
effective search space used: 8125666768
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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