GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000464-TA|BGIBMGA000464-PA|IPR007209|Possible
metal-binding region in RNase L inhibitor, RLI, IPR007177|Protein of
unknown function DUF367
         (240 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010036-1|AAQ22505.1|  274|Drosophila melanogaster LD46811p pro...   266   1e-71
AE014297-1987|AAF55160.1|  274|Drosophila melanogaster CG4338-PA...   266   1e-71
BT003500-1|AAO39504.1| 1169|Drosophila melanogaster RE45036p pro...    29   5.7  
AY058602-1|AAL13831.1| 1257|Drosophila melanogaster LD29335p pro...    29   5.7  
AY058576-1|AAL13805.1| 1602|Drosophila melanogaster LD27111p pro...    29   5.7  
AE013599-965|AAF58877.2| 1877|Drosophila melanogaster CG30007-PA...    29   5.7  
AE013599-964|AAF58876.2| 1693|Drosophila melanogaster CG30007-PB...    29   5.7  
AE013599-158|AAF57274.2| 1169|Drosophila melanogaster CG11212-PA...    29   5.7  

>BT010036-1|AAQ22505.1|  274|Drosophila melanogaster LD46811p
           protein.
          Length = 274

 Score =  266 bits (653), Expect = 1e-71
 Identities = 126/248 (50%), Positives = 163/248 (65%), Gaps = 11/248 (4%)

Query: 4   GKKGSVHGKRSKHHAPRDYAETLNDLTIKXXXXXXXXXXXXXE-------GIKATFSVSM 56
           G  G     ++ H+  R +A+  N+L                        G    F+V+M
Sbjct: 12  GGGGPYRNVKANHNCARSFAQQANELASSSSSENESSDSESSGDGAQNDLGQPPEFAVAM 71

Query: 57  WDLNHCDPKKCSGRKLLRHNLIKNLKLGHRFQGLVLSPVGTQCVSPNDKNIIETFGLAVI 116
           WDLNHCDPKKCSGRKL R  LI NL+LG +F GLVLSPVG  CVSP D++++ + G+AVI
Sbjct: 72  WDLNHCDPKKCSGRKLARLGLISNLRLGQKFPGLVLSPVGQLCVSPLDRDVVASSGVAVI 131

Query: 117 DCSWAKIDETPFSRMKSPHPRLLPFLVAANPINYGKPYQLSCVEALAAAMFITGHKSEAK 176
           DCSWAK+DETPF RM+SPHPRLLPFLVAANPINYGKP +LSCVEA+AA ++I G   EA+
Sbjct: 132 DCSWAKLDETPFGRMRSPHPRLLPFLVAANPINYGKPCKLSCVEAIAATLYICGFTEEAR 191

Query: 177 FYLSKFSWGHSFLELNSDALDLYAVCTDSKSVLEAQATFLESVKNEQDD----RPMWPPS 232
           ++L KFSWGH+FLELN   L+ YA C  S  +++ Q  +LE  + E+D     R  +P S
Sbjct: 192 WFLGKFSWGHAFLELNDKLLNAYAACKSSDEIVKVQNEYLEKEQQERDKPRDLRDFYPTS 251

Query: 233 ESDSASDS 240
            S S+S++
Sbjct: 252 SSSSSSET 259


>AE014297-1987|AAF55160.1|  274|Drosophila melanogaster CG4338-PA
           protein.
          Length = 274

 Score =  266 bits (653), Expect = 1e-71
 Identities = 126/248 (50%), Positives = 163/248 (65%), Gaps = 11/248 (4%)

Query: 4   GKKGSVHGKRSKHHAPRDYAETLNDLTIKXXXXXXXXXXXXXE-------GIKATFSVSM 56
           G  G     ++ H+  R +A+  N+L                        G    F+V+M
Sbjct: 12  GGGGPYRNVKANHNCARSFAQQANELASSSSSENESSDSESSGDGAQNDLGQPPEFAVAM 71

Query: 57  WDLNHCDPKKCSGRKLLRHNLIKNLKLGHRFQGLVLSPVGTQCVSPNDKNIIETFGLAVI 116
           WDLNHCDPKKCSGRKL R  LI NL+LG +F GLVLSPVG  CVSP D++++ + G+AVI
Sbjct: 72  WDLNHCDPKKCSGRKLARLGLISNLRLGQKFPGLVLSPVGQLCVSPLDRDVVASSGVAVI 131

Query: 117 DCSWAKIDETPFSRMKSPHPRLLPFLVAANPINYGKPYQLSCVEALAAAMFITGHKSEAK 176
           DCSWAK+DETPF RM+SPHPRLLPFLVAANPINYGKP +LSCVEA+AA ++I G   EA+
Sbjct: 132 DCSWAKLDETPFGRMRSPHPRLLPFLVAANPINYGKPCKLSCVEAIAATLYICGFTEEAR 191

Query: 177 FYLSKFSWGHSFLELNSDALDLYAVCTDSKSVLEAQATFLESVKNEQDD----RPMWPPS 232
           ++L KFSWGH+FLELN   L+ YA C  S  +++ Q  +LE  + E+D     R  +P S
Sbjct: 192 WFLGKFSWGHAFLELNDKLLNAYAACKSSDEIVKVQNEYLEKEQQERDKPRDLRDFYPTS 251

Query: 233 ESDSASDS 240
            S S+S++
Sbjct: 252 SSSSSSET 259


>BT003500-1|AAO39504.1| 1169|Drosophila melanogaster RE45036p
           protein.
          Length = 1169

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 16/57 (28%), Positives = 29/57 (50%)

Query: 142 LVAANPINYGKPYQLSCVEALAAAMFITGHKSEAKFYLSKFSWGHSFLELNSDALDL 198
           ++ A P+NY  P     VE L + +  T + +  ++  S      SFLE N++ L++
Sbjct: 558 VIIAGPLNYSDPLVQEQVENLTSTLEHTSYVTSRRYTESWLRSFLSFLERNNELLNV 614


>AY058602-1|AAL13831.1| 1257|Drosophila melanogaster LD29335p
           protein.
          Length = 1257

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 190 ELNSDALDLYAVCTDSKSVLEAQATFLESVKNEQDDRPMWPPSESDSAS 238
           +L+S+++D+ +VCT   +  + QAT + ++     D+   P  ES S +
Sbjct: 449 QLSSNSVDIESVCTAQTTATDTQATEMHTIPKAL-DQSSEPTKESSSVN 496


>AY058576-1|AAL13805.1| 1602|Drosophila melanogaster LD27111p protein.
          Length = 1602

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 190  ELNSDALDLYAVCTDSKSVLEAQATFLESVKNEQDDRPMWPPSESDSAS 238
            +L+S+++D+ +VCT   +  + QAT + ++     D+   P  ES S +
Sbjct: 1070 QLSSNSVDIESVCTAQTTATDTQATEMHTIPKAL-DQSSEPTKESSSVN 1117


>AE013599-965|AAF58877.2| 1877|Drosophila melanogaster CG30007-PA,
            isoform A protein.
          Length = 1877

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 190  ELNSDALDLYAVCTDSKSVLEAQATFLESVKNEQDDRPMWPPSESDSAS 238
            +L+S+++D+ +VCT   +  + QAT + ++     D+   P  ES S +
Sbjct: 1069 QLSSNSVDIESVCTAQTTATDTQATEMHTIPKAL-DQSSEPTKESSSVN 1116


>AE013599-964|AAF58876.2| 1693|Drosophila melanogaster CG30007-PB,
            isoform B protein.
          Length = 1693

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 190  ELNSDALDLYAVCTDSKSVLEAQATFLESVKNEQDDRPMWPPSESDSAS 238
            +L+S+++D+ +VCT   +  + QAT + ++     D+   P  ES S +
Sbjct: 1070 QLSSNSVDIESVCTAQTTATDTQATEMHTIPKAL-DQSSEPTKESSSVN 1117


>AE013599-158|AAF57274.2| 1169|Drosophila melanogaster CG11212-PA
           protein.
          Length = 1169

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 16/57 (28%), Positives = 29/57 (50%)

Query: 142 LVAANPINYGKPYQLSCVEALAAAMFITGHKSEAKFYLSKFSWGHSFLELNSDALDL 198
           ++ A P+NY  P     VE L + +  T + +  ++  S      SFLE N++ L++
Sbjct: 558 VIIAGPLNYSDPLVQEQVENLTSTLEHTSYVTSRRYTESWLRSFLSFLERNNELLNV 614


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.132    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,518,424
Number of Sequences: 52641
Number of extensions: 433838
Number of successful extensions: 878
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 874
Number of HSP's gapped (non-prelim): 8
length of query: 240
length of database: 24,830,863
effective HSP length: 83
effective length of query: 157
effective length of database: 20,461,660
effective search space: 3212480620
effective search space used: 3212480620
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)