Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000463-TA|BGIBMGA000463-PA|undefined
(114 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28710| Best HMM Match : Transposase_11 (HMM E-Value=4.9) 46 6e-06
SB_24312| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_29524| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-05
SB_1285| Best HMM Match : SET (HMM E-Value=0.011) 44 3e-05
SB_53723| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 4e-05
SB_25778| Best HMM Match : COX17 (HMM E-Value=1.1) 44 4e-05
SB_19874| Best HMM Match : CBM_X (HMM E-Value=2.2) 36 0.010
SB_49038| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_46089| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_41311| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_58164| Best HMM Match : zf-RNPHF (HMM E-Value=3) 28 1.6
SB_53839| Best HMM Match : zf-RNPHF (HMM E-Value=3) 28 1.6
SB_24538| Best HMM Match : zf-RNPHF (HMM E-Value=3) 28 1.6
SB_12197| Best HMM Match : zf-RNPHF (HMM E-Value=3) 28 1.6
SB_41096| Best HMM Match : zf-RNPHF (HMM E-Value=3) 27 2.8
SB_50650| Best HMM Match : zf-RNPHF (HMM E-Value=3) 27 2.8
SB_29451| Best HMM Match : K_tetra (HMM E-Value=1.1) 27 2.8
SB_24203| Best HMM Match : zf-RNPHF (HMM E-Value=3) 27 2.8
SB_22439| Best HMM Match : SRP19 (HMM E-Value=2.1) 27 2.8
SB_6155| Best HMM Match : SRP19 (HMM E-Value=0.95) 27 2.8
SB_11956| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.7
SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.7
SB_7667| Best HMM Match : DUF827 (HMM E-Value=0.33) 27 4.9
SB_43609| Best HMM Match : zf-RNPHF (HMM E-Value=3) 26 6.4
SB_52124| Best HMM Match : SRP19 (HMM E-Value=1.1) 26 6.4
SB_56211| Best HMM Match : SRP19 (HMM E-Value=0.51) 26 8.5
>SB_28710| Best HMM Match : Transposase_11 (HMM E-Value=4.9)
Length = 302
Score = 46.4 bits (105), Expect = 6e-06
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 34 IVVTLAEGLLDEGRCMITDNYYTSDPLTEFMFARKSHLCGTVNKKRRGLPKE 85
+V L GL G + TDNYYTS L +F+F + + CGT+ R+ KE
Sbjct: 59 VVKELCSGLEGMGHHLYTDNYYTSVELYQFLFDNQIYACGTIKGNRKNFAKE 110
>SB_24312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 787
Score = 45.6 bits (103), Expect = 1e-05
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 8 SAEVYTWGYQIYNDQSVQVFGLDTG---SIVVTLAEGLLDEGRCMITDNYYTSDPLTEFM 64
S YT+ + +Y + G +V+ L LL++G + DN+YTS L + +
Sbjct: 337 STNCYTYDFDVYAGRQTANAPSTNGLAYDVVMKLLSPLLNQGYHLYCDNFYTSVTLIKDL 396
Query: 65 FARKSHLCGTVNKKRRGLPKERR 87
F K+ GT + RRG P+E +
Sbjct: 397 FLVKTPATGTATENRRGFPEEMK 419
>SB_29524| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 44.8 bits (101), Expect = 2e-05
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 12 YTWGYQIY----NDQSVQVFGLDTGSIVVTLAEGLLDEGRCMITDNYYTSDPLTEFMFAR 67
Y Y++Y N Q V G D +V+ +A+ L+ R + DN++T+ L E + +
Sbjct: 123 YVCNYKVYLGQENRQRVHGLGYD---VVMDMAKPFLNSYRHIFCDNFFTTVRLFEHLLDQ 179
Query: 68 KSHLCGTVNKKRRGLP 83
K++ CGTV RR LP
Sbjct: 180 KTYACGTVRVNRRELP 195
>SB_1285| Best HMM Match : SET (HMM E-Value=0.011)
Length = 829
Score = 44.0 bits (99), Expect = 3e-05
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 8 SAEVYTWGYQIYNDQSVQVFGLDTG---SIVVTLAEGLLDEGRCMITDNYYTSDPLTEFM 64
S YT+ + +Y + G +V+ L LL++G + DN+YTS L + +
Sbjct: 337 STNGYTYDFDVYAGRQTANAPSTNGLAYDVVMKLLSPLLNQGYHLYCDNFYTSVTLIKDL 396
Query: 65 FARKSHLCGTVNKKRRGLPKERR 87
F K+ GT + RRG P+E +
Sbjct: 397 FLVKTPATGTAAENRRGFPEEMK 419
>SB_53723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 43.6 bits (98), Expect = 4e-05
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 12 YTWGYQIY----NDQSVQVFGLDTGSIVVTLAEGLLDEGRCMITDNYYTSDPLTEFMFAR 67
Y Y++Y N Q V G D +V+ +A+ L+ R + DN++T+ L + + +
Sbjct: 272 YVCNYKVYLGQENRQRVHGLGYD---VVMDMAKPFLNSYRHIFCDNFFTTVRLFDHLLDQ 328
Query: 68 KSHLCGTVNKKRRGLP 83
K++ CGTV RR LP
Sbjct: 329 KTYACGTVRVNRRELP 344
>SB_25778| Best HMM Match : COX17 (HMM E-Value=1.1)
Length = 567
Score = 43.6 bits (98), Expect = 4e-05
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 12 YTWGYQIY----NDQSVQVFGLDTGSIVVTLAEGLLDEGRCMITDNYYTSDPLTEFMFAR 67
Y Y++Y N Q V G D +V+ +A+ L+ R + DN++T+ L + + +
Sbjct: 272 YVCNYKVYLGQENRQRVHGLGYD---VVMDMAKPFLNSYRHIFCDNFFTTVRLFDHLLDQ 328
Query: 68 KSHLCGTVNKKRRGLP 83
K++ CGTV RR LP
Sbjct: 329 KTYACGTVRVNRRELP 344
>SB_19874| Best HMM Match : CBM_X (HMM E-Value=2.2)
Length = 725
Score = 35.5 bits (78), Expect = 0.010
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 12 YTWGYQIYNDQSVQVFGLDTGSIVVT-LAEGLLDEGRCMITDNYYTSDPLTEFMFARKSH 70
Y +Q+Y + Q L G VV L+ L+ +G + DN+++S L + R+ +
Sbjct: 272 YVSRFQVYTGKPQQGQELGLGRRVVEELSTDLIGKGYHLYFDNFFSSVGLMASLLERRIY 331
Query: 71 LCGTVNKKRRGLPKERRREKL 91
T + R+ PKE KL
Sbjct: 332 ATATTRQNRKEFPKELNTFKL 352
>SB_49038| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 348
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 60 LTEFMFARKSHLCGTVNKKRRGLPKERRR 88
L + + RK++ CGTV+ RR L K++ +
Sbjct: 159 LFDHLLGRKTYACGTVHVNRRELSKDKSK 187
>SB_46089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 72 CGTVNKKRRGLPKERRREKLSILAA---HETIVKKTLTARTCTPTQ 114
CG K +RG +E + +KL+I A H+ V K TAR TP +
Sbjct: 14 CGLSGKIKRGGARENKNKKLNIAPAVVLHQNNVAKR-TARRTTPIE 58
>SB_41311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 753
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 46 GRCMITDNYYTSDPLTEFMFARKSHLCGTVNKKRR 80
G + DNY++S L + + K + CGT+ K RR
Sbjct: 672 GYFVFMDNYFSSVGLFRELQSDKIYACGTLRKNRR 706
>SB_58164| Best HMM Match : zf-RNPHF (HMM E-Value=3)
Length = 522
Score = 28.3 bits (60), Expect = 1.6
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 7 WSAEVYTWGYQIYNDQSVQVFGL---DTGSIVVTL-----AEGLLDEGRCMITDNYYTSD 58
WS +V+ G I++ V V G+ G TL AE L+ G T NYYT++
Sbjct: 416 WSKDVF--GVDIFDRFLVDVRGVYDARLGDSTATLRRFEMAERALESGYAFPTVNYYTNE 473
Query: 59 PLTEFMFARKSHLCGTVNKKRRGLPKERRREKLSILAAHETIVKKT 104
L E F ++++KR G E R+ +S AH + T
Sbjct: 474 VLME-KFQE------SISQKRGGFSIEDYRDIVSKFIAHYDVEGNT 512
>SB_53839| Best HMM Match : zf-RNPHF (HMM E-Value=3)
Length = 247
Score = 28.3 bits (60), Expect = 1.6
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 7 WSAEVYTWGYQIYNDQSVQVFGL---DTGSIVVTL-----AEGLLDEGRCMITDNYYTSD 58
WS +V+ G I++ V V G+ G TL AE L+ G T NYYT++
Sbjct: 141 WSKDVF--GVDIFDRFLVDVRGVYDARLGDSTATLRRFEMAERALESGYAFPTVNYYTNE 198
Query: 59 PLTEFMFARKSHLCGTVNKKRRGLPKERRREKLSILAAHETIVKKT 104
L E F ++++KR G E R+ +S AH + T
Sbjct: 199 VLME-KFQE------SISQKRGGFSIEDYRDIVSKFIAHYDVEGNT 237
>SB_24538| Best HMM Match : zf-RNPHF (HMM E-Value=3)
Length = 173
Score = 28.3 bits (60), Expect = 1.6
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 7 WSAEVYTWGYQIYNDQSVQVFGL---DTGSIVVTL-----AEGLLDEGRCMITDNYYTSD 58
WS +V+ G I++ V V G+ G TL AE L+ G T NYYT++
Sbjct: 67 WSKDVF--GVDIFDRFLVDVRGVYDARLGDSTATLRRFEMAERALESGYAFPTVNYYTNE 124
Query: 59 PLTEFMFARKSHLCGTVNKKRRGLPKERRREKLSILAAHETIVKKT 104
L E F ++++KR G E R+ +S AH + T
Sbjct: 125 VLME-KFQE------SISQKRGGFSIEDYRDIVSKFIAHYDVEGNT 163
>SB_12197| Best HMM Match : zf-RNPHF (HMM E-Value=3)
Length = 190
Score = 28.3 bits (60), Expect = 1.6
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 7 WSAEVYTWGYQIYNDQSVQVFGL---DTGSIVVTL-----AEGLLDEGRCMITDNYYTSD 58
WS +V+ G I++ V V G+ G TL AE L+ G T NYYT++
Sbjct: 67 WSKDVF--GVDIFDRFLVDVRGVYDARLGDSTATLRRFEMAERALESGYAFPTVNYYTNE 124
Query: 59 PLTEFMFARKSHLCGTVNKKRRGLPKERRREKLSILAAHETIVKKT 104
L E F ++++KR G E R+ +S AH + T
Sbjct: 125 VLME-KFQE------SISQKRGGFSIEDYRDIVSKFIAHYDVEGNT 163
>SB_41096| Best HMM Match : zf-RNPHF (HMM E-Value=3)
Length = 104
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 38 LAEGLLDEGRCMITDNYYTSDPLTEFMFARKSHLCGTVNKKRRGLPKERRREKLSILAAH 97
+AE L+ G T NYYT++ L E F ++++KR G E R+ +S AH
Sbjct: 35 MAERALESGYAFPTVNYYTNEVLME-KFQE------SISQKRGGFSIEDYRDIVSKFIAH 87
Query: 98 ETIVKKT 104
+ T
Sbjct: 88 YDVEGNT 94
>SB_50650| Best HMM Match : zf-RNPHF (HMM E-Value=3)
Length = 356
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 38 LAEGLLDEGRCMITDNYYTSDPLTEFMFARKSHLCGTVNKKRRGLPKERRREKLSILAAH 97
+AE L+ G T NYYT++ L E F ++++KR G E R+ +S AH
Sbjct: 270 MAERALESGYAFPTVNYYTNEVLME-KFQE------SISQKRGGFSIEDYRDIVSKFIAH 322
Query: 98 ETIVKKT 104
+ T
Sbjct: 323 YDVEGNT 329
>SB_29451| Best HMM Match : K_tetra (HMM E-Value=1.1)
Length = 607
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 38 LAEGLLDEGRCMITDNYYTSDPLTEFMFARKSHLCGTVNKKRRGLPKERRREKLSILAAH 97
+AE L+ G T NYYT++ L E F ++++KR G E R+ +S AH
Sbjct: 399 MAERALESGYAFPTVNYYTNEVLME-KFQE------SISQKRGGFSIEDYRDIVSKFIAH 451
Query: 98 ETIVKKT 104
+ T
Sbjct: 452 YDVEGNT 458
>SB_24203| Best HMM Match : zf-RNPHF (HMM E-Value=3)
Length = 438
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 38 LAEGLLDEGRCMITDNYYTSDPLTEFMFARKSHLCGTVNKKRRGLPKERRREKLSILAAH 97
+AE L+ G T NYYT++ L E F ++++KR G E R+ +S AH
Sbjct: 369 MAERALESGYAFPTVNYYTNEVLME-KFQE------SISQKRGGFSIEDYRDIVSKFIAH 421
Query: 98 ETIVKKT 104
+ T
Sbjct: 422 YDVEGNT 428
>SB_22439| Best HMM Match : SRP19 (HMM E-Value=2.1)
Length = 637
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 38 LAEGLLDEGRCMITDNYYTSDPLTEFMFARKSHLCGTVNKKRRGLPKERRREKLSILAAH 97
+AE L+ G T NYYT++ L E F ++++KR G E R+ +S AH
Sbjct: 568 MAERALESGYAFPTVNYYTNEVLME-KFQE------SISQKRGGFSIEDYRDIVSKFIAH 620
Query: 98 ETIVKKT 104
+ T
Sbjct: 621 YDVEGNT 627
>SB_6155| Best HMM Match : SRP19 (HMM E-Value=0.95)
Length = 568
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 38 LAEGLLDEGRCMITDNYYTSDPLTEFMFARKSHLCGTVNKKRRGLPKERRREKLSILAAH 97
+AE L+ G T NYYT++ L E F ++++KR G E R+ +S AH
Sbjct: 499 MAERALESGYAFPTVNYYTNEVLME-KFQE------SISQKRGGFSIEDYRDIVSKFIAH 551
Query: 98 ETIVKKT 104
+ T
Sbjct: 552 YDVEGNT 558
>SB_11956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 832
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/59 (22%), Positives = 28/59 (47%)
Query: 33 SIVVTLAEGLLDEGRCMITDNYYTSDPLTEFMFARKSHLCGTVNKKRRGLPKERRREKL 91
++V L + + DN+++S L E + + CGT+ + R+ P + + +L
Sbjct: 548 NVVHALTSSVRGSNFFVFMDNWFSSVGLFEALERVNIYACGTLRQNRKEFPPQLKNVRL 606
>SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 53 NYYTSDPLTEFMFARKSHLCGTVNKKR--RGLPKERRREKLSILAAHETIVKKTLTA 107
N T++P E R + T K+R PK++ +KL L +H T+V T T+
Sbjct: 199 NLRTAEPRFEVWKFRTNFNMSTRRKRRITHFFPKQKAPDKLGNLESHPTLVVVTPTS 255
>SB_7667| Best HMM Match : DUF827 (HMM E-Value=0.33)
Length = 806
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 49 MITDNYYTSDPLTEFMFARKSHLCGTVNKKRRGLPKE 85
++ +NY +D L E RKSH+ G +K L E
Sbjct: 142 VLVNNYPANDKLVESQSKRKSHVKGITHKDGHTLDLE 178
>SB_43609| Best HMM Match : zf-RNPHF (HMM E-Value=3)
Length = 348
Score = 26.2 bits (55), Expect = 6.4
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 17/106 (16%)
Query: 7 WSAEVYTWGYQIYNDQSVQVFGL---DTGSIVVTL-----AEGLLDEGRCMITDNYYTSD 58
WS +V+ G I++ V V G+ G TL AE L+ G T NYYT++
Sbjct: 225 WSKDVF--GVDIFDRFLVDVRGVYDARLGDSTATLRRFEMAERALESGYAFPTVNYYTNE 282
Query: 59 PLTEFMFARKSHLCGTVNKKRRGLPKERRREKLSILAAHETIVKKT 104
L E F ++++KR G E R+ S AH + T
Sbjct: 283 VLME-KFQE------SISQKRGGFSIEDYRDIGSKFIAHYDVEGNT 321
>SB_52124| Best HMM Match : SRP19 (HMM E-Value=1.1)
Length = 621
Score = 26.2 bits (55), Expect = 6.4
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 38 LAEGLLDEGRCMITDNYYTSDPLTEFMFARKSHLCGTVNKKRRGLPKERRREKLSILAAH 97
+AE L+ G T NYYT++ L E F ++++KR G E R+ +S AH
Sbjct: 552 MAERALESGYSFPTVNYYTNEVLME-KFQE------SISQKRGGFYIEDYRDIVSKFIAH 604
Query: 98 ETIVKKT 104
+ T
Sbjct: 605 YDVEGNT 611
>SB_56211| Best HMM Match : SRP19 (HMM E-Value=0.51)
Length = 488
Score = 25.8 bits (54), Expect = 8.5
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 17/106 (16%)
Query: 7 WSAEVYTWGYQIYNDQSVQVFGL---DTGSIVVTL-----AEGLLDEGRCMITDNYYTSD 58
WS +V+ G I++ V V G+ G TL AE L+ G T NYYT++
Sbjct: 365 WSKDVF--GVDIFDRFLVDVRGVYDARLGDSTATLRRFEMAERALESGYAFPTVNYYTNE 422
Query: 59 PLTEFMFARKSHLCGTVNKKRRGLPKERRREKLSILAAHETIVKKT 104
L E F ++++K G E R+ +S AH + T
Sbjct: 423 VLME-KFQE------SISQKSGGFSIEDYRDIVSKFIAHYDVEGNT 461
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.133 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,793,861
Number of Sequences: 59808
Number of extensions: 136653
Number of successful extensions: 379
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 368
Number of HSP's gapped (non-prelim): 26
length of query: 114
length of database: 16,821,457
effective HSP length: 73
effective length of query: 41
effective length of database: 12,455,473
effective search space: 510674393
effective search space used: 510674393
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
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