GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000463-TA|BGIBMGA000463-PA|undefined
         (114 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   3.6  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    21   8.2  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           21   8.2  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 76  NKKRRGLPKERRREKLSILAAHETIVKKTLTARTCTPT 113
           ++K+RG PK +     ++     T   +T T RT T T
Sbjct: 548 SRKKRGAPKRKATSPPAVATPPSTSRARTAT-RTATTT 584


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query: 7   WSAEVYTWGYQIYNDQSVQV 26
           W ++ + W Y IY  ++V V
Sbjct: 104 WCSKAFLWAYFIYACETVIV 123


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/25 (28%), Positives = 12/25 (48%)

Query: 50 ITDNYYTSDPLTEFMFARKSHLCGT 74
          + D +YT   L  ++F  +   C T
Sbjct: 49 LLDRFYTHSALLNYLFGMEGVWCST 73


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,760
Number of Sequences: 2123
Number of extensions: 3917
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 3
length of query: 114
length of database: 516,269
effective HSP length: 56
effective length of query: 58
effective length of database: 397,381
effective search space: 23048098
effective search space used: 23048098
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)