Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000463-TA|BGIBMGA000463-PA|undefined
(114 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical pr... 31 0.26
Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z78199-2|CAB54275.1| 582|Caenorhabditis elegans Hypothetical pr... 28 1.4
AF108229-2|AAF17301.1| 582|Caenorhabditis elegans VAB-8S protein. 28 1.4
AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein. 28 1.4
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 27 2.4
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 27 3.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 3.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 3.2
AL033513-2|CAA22079.2| 439|Caenorhabditis elegans Hypothetical ... 27 3.2
AL021446-4|CAA16267.2| 439|Caenorhabditis elegans Hypothetical ... 27 3.2
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 27 3.2
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z92788-8|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z92788-7|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z92788-5|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 27 4.2
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 27 4.2
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 27 4.2
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 27 4.2
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 27 4.2
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 27 4.2
Z47357-4|CAA87422.1| 360|Caenorhabditis elegans Hypothetical pr... 26 5.6
U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical pr... 26 7.4
>U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical
protein F31E3.4 protein.
Length = 1131
Score = 30.7 bits (66), Expect = 0.26
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 19 YNDQSVQVFGLDTGSIVVTLAEGLLDEGRCMITDNYYTSDPLTEFMFARKSHLCGTVNKK 78
++ ++VQ+ + S V + E ++ + +TD+ D LT+F K+ LC T ++K
Sbjct: 925 FDGKTVQMRAVGRASCVDSTGERIIFDDHVKLTDDVEVVDYLTKFSGIVKADLCPTTSEK 984
>Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical
protein K12F2.2a protein.
Length = 1066
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 66 ARKSHLCGTVNKKRRGLPKERRREKLSILAAHETI 100
A H+ T NKK L K+R EKLS++ + I
Sbjct: 960 ANDYHIYSTTNKKPHILDKKRNEEKLSLVRQADEI 994
>Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical
protein K12F2.2a protein.
Length = 1066
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 66 ARKSHLCGTVNKKRRGLPKERRREKLSILAAHETI 100
A H+ T NKK L K+R EKLS++ + I
Sbjct: 960 ANDYHIYSTTNKKPHILDKKRNEEKLSLVRQADEI 994
>Z78199-2|CAB54275.1| 582|Caenorhabditis elegans Hypothetical
protein K12F2.2b protein.
Length = 582
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 66 ARKSHLCGTVNKKRRGLPKERRREKLSILAAHETI 100
A H+ T NKK L K+R EKLS++ + I
Sbjct: 476 ANDYHIYSTTNKKPHILDKKRNEEKLSLVRQADEI 510
>AF108229-2|AAF17301.1| 582|Caenorhabditis elegans VAB-8S protein.
Length = 582
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 66 ARKSHLCGTVNKKRRGLPKERRREKLSILAAHETI 100
A H+ T NKK L K+R EKLS++ + I
Sbjct: 476 ANDYHIYSTTNKKPHILDKKRNEEKLSLVRQADEI 510
>AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein.
Length = 1066
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 66 ARKSHLCGTVNKKRRGLPKERRREKLSILAAHETI 100
A H+ T NKK L K+R EKLS++ + I
Sbjct: 960 ANDYHIYSTTNKKPHILDKKRNEEKLSLVRQADEI 994
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 27.5 bits (58), Expect = 2.4
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Query: 23 SVQVFGLDTGSIVVTLAEGLLDEGRCMITDNYYTSDPLTEFMFARKSHLCGTVNK 77
S FG+D + V+ L + LD C + DN+ SDP HLC T +K
Sbjct: 1339 SPDAFGIDYVAEVICLDDPSLDSYLCTVCDNW--SDPK-----GMLRHLCSTDHK 1386
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 67 RKSHLCGTVNKKRRGLPKERRREKLSIL 94
RK C ++ R G P+ERRR K ++
Sbjct: 1636 RKYVECELIDSSREGSPQERRRRKKKVM 1663
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 62 EFMFARKSHLCGTVNKKRRGLPKERRREKLSILAAHE 98
EF F R+S ++K+ GLP ++ EK + A +
Sbjct: 12773 EFSFKRRSETPDDKSRKKEGLPPAKKSEKKDEVTAEK 12809
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 62 EFMFARKSHLCGTVNKKRRGLPKERRREKLSILAAHE 98
EF F R+S ++K+ GLP ++ EK + A +
Sbjct: 12773 EFSFKRRSETPDDKSRKKEGLPPAKKSEKKDEVTAEK 12809
>AL033513-2|CAA22079.2| 439|Caenorhabditis elegans Hypothetical
protein Y70D2A.1 protein.
Length = 439
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 62 EFMFARKSHLCGTVNKKRRGLPKERRREKLSILAAHETIVKKT 104
+F +R S L + RRG+P + EKL+++ +E++ T
Sbjct: 393 KFDDSRNSSLKSGKDSVRRGVPADSLIEKLTVIKENESVTSDT 435
>AL021446-4|CAA16267.2| 439|Caenorhabditis elegans Hypothetical
protein Y70D2A.1 protein.
Length = 439
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 62 EFMFARKSHLCGTVNKKRRGLPKERRREKLSILAAHETIVKKT 104
+F +R S L + RRG+P + EKL+++ +E++ T
Sbjct: 393 KFDDSRNSSLKSGKDSVRRGVPADSLIEKLTVIKENESVTSDT 435
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 67 RKSHLCGTVNKKRRGLPKERRREKLSIL 94
RK C ++ R G P+ERRR K ++
Sbjct: 1636 RKYVECELIDSSREGSPQERRRRKKKVM 1663
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 26.6 bits (56), Expect = 4.2
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 10 EVYTWGYQIYNDQSVQVFGLDTGSIVVTLAEGLLDEGRCMITDNYYTSDPLTEFMFARKS 69
EV W + +S + TG + T AE LDE + + D + + PL + A +
Sbjct: 3988 EVEKWQRWLEETESALLSTKPTGGLPET-AEFQLDEFKALKLDVEHNASPLEAHLHATEQ 4046
Query: 70 HL 71
HL
Sbjct: 4047 HL 4048
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 26.6 bits (56), Expect = 4.2
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 10 EVYTWGYQIYNDQSVQVFGLDTGSIVVTLAEGLLDEGRCMITDNYYTSDPLTEFMFARKS 69
EV W + +S + TG + T AE LDE + + D + + PL + A +
Sbjct: 3988 EVEKWQRWLEETESALLSTKPTGGLPET-AEFQLDEFKALKLDVEHNASPLEAHLHATEQ 4046
Query: 70 HL 71
HL
Sbjct: 4047 HL 4048
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 26.6 bits (56), Expect = 4.2
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 10 EVYTWGYQIYNDQSVQVFGLDTGSIVVTLAEGLLDEGRCMITDNYYTSDPLTEFMFARKS 69
EV W + +S + TG + T AE LDE + + D + + PL + A +
Sbjct: 3443 EVEKWQRWLEETESALLSTKPTGGLPET-AEFQLDEFKALKLDVEHNASPLEAHLHATEQ 3501
Query: 70 HL 71
HL
Sbjct: 3502 HL 3503
>Z92788-8|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 26.6 bits (56), Expect = 4.2
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 10 EVYTWGYQIYNDQSVQVFGLDTGSIVVTLAEGLLDEGRCMITDNYYTSDPLTEFMFARKS 69
EV W + +S + TG + T AE LDE + + D + + PL + A +
Sbjct: 3988 EVEKWQRWLEETESALLSTKPTGGLPET-AEFQLDEFKALKLDVEHNASPLEAHLHATEQ 4046
Query: 70 HL 71
HL
Sbjct: 4047 HL 4048
>Z92788-7|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 26.6 bits (56), Expect = 4.2
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 10 EVYTWGYQIYNDQSVQVFGLDTGSIVVTLAEGLLDEGRCMITDNYYTSDPLTEFMFARKS 69
EV W + +S + TG + T AE LDE + + D + + PL + A +
Sbjct: 3988 EVEKWQRWLEETESALLSTKPTGGLPET-AEFQLDEFKALKLDVEHNASPLEAHLHATEQ 4046
Query: 70 HL 71
HL
Sbjct: 4047 HL 4048
>Z92788-5|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 26.6 bits (56), Expect = 4.2
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 10 EVYTWGYQIYNDQSVQVFGLDTGSIVVTLAEGLLDEGRCMITDNYYTSDPLTEFMFARKS 69
EV W + +S + TG + T AE LDE + + D + + PL + A +
Sbjct: 3443 EVEKWQRWLEETESALLSTKPTGGLPET-AEFQLDEFKALKLDVEHNASPLEAHLHATEQ 3501
Query: 70 HL 71
HL
Sbjct: 3502 HL 3503
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 26.6 bits (56), Expect = 4.2
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 10 EVYTWGYQIYNDQSVQVFGLDTGSIVVTLAEGLLDEGRCMITDNYYTSDPLTEFMFARKS 69
EV W + +S + TG + T AE LDE + + D + + PL + A +
Sbjct: 3988 EVEKWQRWLEETESALLSTKPTGGLPET-AEFQLDEFKALKLDVEHNASPLEAHLHATEQ 4046
Query: 70 HL 71
HL
Sbjct: 4047 HL 4048
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 26.6 bits (56), Expect = 4.2
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 10 EVYTWGYQIYNDQSVQVFGLDTGSIVVTLAEGLLDEGRCMITDNYYTSDPLTEFMFARKS 69
EV W + +S + TG + T AE LDE + + D + + PL + A +
Sbjct: 3988 EVEKWQRWLEETESALLSTKPTGGLPET-AEFQLDEFKALKLDVEHNASPLEAHLHATEQ 4046
Query: 70 HL 71
HL
Sbjct: 4047 HL 4048
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 26.6 bits (56), Expect = 4.2
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 10 EVYTWGYQIYNDQSVQVFGLDTGSIVVTLAEGLLDEGRCMITDNYYTSDPLTEFMFARKS 69
EV W + +S + TG + T AE LDE + + D + + PL + A +
Sbjct: 3443 EVEKWQRWLEETESALLSTKPTGGLPET-AEFQLDEFKALKLDVEHNASPLEAHLHATEQ 3501
Query: 70 HL 71
HL
Sbjct: 3502 HL 3503
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 26.6 bits (56), Expect = 4.2
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 10 EVYTWGYQIYNDQSVQVFGLDTGSIVVTLAEGLLDEGRCMITDNYYTSDPLTEFMFARKS 69
EV W + +S + TG + T AE LDE + + D + + PL + A +
Sbjct: 3988 EVEKWQRWLEETESALLSTKPTGGLPET-AEFQLDEFKALKLDVEHNASPLEAHLHATEQ 4046
Query: 70 HL 71
HL
Sbjct: 4047 HL 4048
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 52 DNYYTSDPLTEFMFARKSHLCGTVNKKRRGLPKERRREKLSILAAHET 99
D Y T+D + + M A K + V + GL +R L I A+ +T
Sbjct: 110 DTYCTNDNIIKMMVANKIDMPNRVVTREEGLKFAKRHRTLFIEASAKT 157
>Z47357-4|CAA87422.1| 360|Caenorhabditis elegans Hypothetical
protein ZK1128.3 protein.
Length = 360
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 73 GTVNKKRRGLPKERRREKLSILA-AHETIVKKTLTARTCTP 112
G V+KKRRG K+ RR+++ L +T+ + +T P
Sbjct: 35 GGVHKKRRGARKKNRRQRMEGLENVDQTVDLQLVTVPKVVP 75
>U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical
protein K05F1.3 protein.
Length = 412
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 1 MKISRLWS----AEVYTWGYQIYNDQSVQVFGLDTGSIVVTLA 39
+++SRL++ AEV ++G YN + F DT ++ T A
Sbjct: 314 LELSRLFTYRAAAEVDSYGVSSYNASIAKCFAADTANVAATNA 356
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.133 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,726,305
Number of Sequences: 27539
Number of extensions: 98136
Number of successful extensions: 193
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 179
Number of HSP's gapped (non-prelim): 26
length of query: 114
length of database: 12,573,161
effective HSP length: 72
effective length of query: 42
effective length of database: 10,590,353
effective search space: 444794826
effective search space used: 444794826
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)
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